Homology
BLAST of Chy10G176830 vs. ExPASy Swiss-Prot
Match:
Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)
HSP 1 Score: 335.5 bits (859), Expect = 5.6e-91
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 50 TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
T + +KKVG++ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE +
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
+L QEENRK++ +RY ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Chy10G176830 vs. ExPASy Swiss-Prot
Match:
Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 9.4e-46
Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 0
Query: 48 FTTSERRVVKKVGR----ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKW 107
FT VV R + +WK R G+ KA ++ + N KE VYG L+ +
Sbjct: 23 FTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSF 82
Query: 108 IAWETQFPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRV 167
IAWE +FPL+ KAL IL +WK++IQV KWMLSKGQG TMGTY +LL A D R+
Sbjct: 83 IAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRL 142
Query: 168 DEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR 227
DEAE LWN + H ++ F++MIS+Y D+ K+ E+FADMEELGVKP+ V
Sbjct: 143 DEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSM 202
Query: 228 VGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR 262
VG+ F KL ++ + + K+Y QW++ + KG RV+V+
Sbjct: 203 VGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVK 241
BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match:
A0A0A0KSA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1)
HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1 MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match:
A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)
HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLVLHG+STGFDAL+PKIDCIYYHNK FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1 MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270
BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match:
A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)
HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLVLHG+STGFDAL+PKIDCIYYHNK FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1 MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270
BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match:
A0A6J1CC95 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 232/268 (86.57%), Postives = 244/268 (91.04%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
M V GTS GFD L+PK DCI NK TFR AS C HNQA QP TS T ERR+VKKVG
Sbjct: 1 MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWET+FPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDEDTVRRV RAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 269
+KRY C+WKYIHFKGERVRV+RDGWDED
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDED 268
BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match:
A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 234/269 (86.99%), Postives = 247/269 (91.82%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVV-KKV 60
ML G+STGFDAL+PK CIY +NK FR ASV CVH QAAQ LT TT+ERR+V KKV
Sbjct: 1 MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60
Query: 61 GRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKAL 120
G+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAA+KAL
Sbjct: 61 GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120
Query: 121 RILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
RILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180
Query: 181 SISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKM 240
SISKR+FSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV AF+KLGQEEN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240
Query: 241 VYKRYSCQWKYIHFKGERVRVRRDGWDED 269
VYKRY C+WKYIHFKGERVRVRRDGWDED
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDED 269
BLAST of Chy10G176830 vs. NCBI nr
Match:
XP_011654973.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus] >KGN50596.1 hypothetical protein Csa_021408 [Cucumis sativus])
HSP 1 Score: 534 bits (1375), Expect = 3.67e-191
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1 MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
BLAST of Chy10G176830 vs. NCBI nr
Match:
XP_008464896.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo] >KAA0051555.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 528 bits (1361), Expect = 5.00e-189
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLVLHG+STGFDAL+PKIDCIYYHNK FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1 MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270
BLAST of Chy10G176830 vs. NCBI nr
Match:
XP_031740922.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus])
HSP 1 Score: 523 bits (1348), Expect = 4.29e-187
Identity = 257/270 (95.19%), Postives = 261/270 (96.67%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1 MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+ETHHLWKKRDSAGSGQKALNLV SQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KETHHLWKKRDSAGSGQKALNLV---SQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 267
BLAST of Chy10G176830 vs. NCBI nr
Match:
XP_038892676.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida])
HSP 1 Score: 485 bits (1249), Expect = 4.09e-172
Identity = 239/268 (89.18%), Postives = 248/268 (92.54%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
MLV HG+STGFDAL+PKIDCIY++NK TFR ASV CVH QA ERR+VKKVG
Sbjct: 1 MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQA----------ERRIVKKVG 60
Query: 61 RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61 KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
ILRK SQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAF KLGQEEN+KMV
Sbjct: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240
Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268
YKRY CQWKYIHFKGERVRVRRDGWDED
Sbjct: 241 YKRYGCQWKYIHFKGERVRVRRDGWDED 258
BLAST of Chy10G176830 vs. NCBI nr
Match:
XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 476 bits (1226), Expect = 1.95e-168
Identity = 234/269 (86.99%), Postives = 248/269 (92.19%), Query Frame = 0
Query: 1 MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKK-V 60
ML G+STGFDAL+PK CIY +NK FR ASV CVH QAAQ LTS TT+ERR+VKK V
Sbjct: 1 MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60
Query: 61 GRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKAL 120
G+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAA+KAL
Sbjct: 61 GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120
Query: 121 RILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
RILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180
Query: 181 SISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKM 240
SISKR+FSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKL 240
Query: 241 VYKRYSCQWKYIHFKGERVRVRRDGWDED 268
VYKRY C+WKYIHFKGERVRVRRDGWDED
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDED 269
BLAST of Chy10G176830 vs. TAIR 10
Match:
AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 50 TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
T + +KKVG++ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE +
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
+L QEENRK++ +RY ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Chy10G176830 vs. TAIR 10
Match:
AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 50 TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
T + +KKVG++ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE +
Sbjct: 42 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101
Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161
Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221
Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
+L QEENRK++ +RY ++KYI+F GERVRV+R
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254
BLAST of Chy10G176830 vs. TAIR 10
Match:
AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 50 TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
T + +KKVG++ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE +
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
+L QEENRK++ +RY ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Chy10G176830 vs. TAIR 10
Match:
AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 50 TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
T + +KKVG++ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYG LNKW+AWE +
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
+L QEENRK++ +RY ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of Chy10G176830 vs. TAIR 10
Match:
AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 185.3 bits (469), Expect = 6.7e-47
Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 0
Query: 48 FTTSERRVVKKVGR----ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKW 107
FT VV R + +WK R G+ KA ++ + N KE VYG L+ +
Sbjct: 23 FTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSF 82
Query: 108 IAWETQFPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRV 167
IAWE +FPL+ KAL IL +WK++IQV KWMLSKGQG TMGTY +LL A D R+
Sbjct: 83 IAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRL 142
Query: 168 DEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR 227
DEAE LWN + H ++ F++MIS+Y D+ K+ E+FADMEELGVKP+ V
Sbjct: 143 DEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSM 202
Query: 228 VGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR 262
VG+ F KL ++ + + K+Y QW++ + KG RV+V+
Sbjct: 203 VGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVK 241
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q2V3H0 | 5.6e-91 | 74.65 | Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop... | [more] |
Q8LG95 | 9.4e-46 | 43.84 | Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KSA5 | 3.0e-148 | 96.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1 | [more] |
A0A5A7UD21 | 1.3e-146 | 95.19 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CP50 | 1.3e-146 | 95.19 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
A0A6J1CC95 | 7.5e-131 | 86.57 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
A0A6J1FWG3 | 7.5e-131 | 86.99 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
XP_011654973.1 | 3.67e-191 | 96.30 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
XP_008464896.1 | 5.00e-189 | 95.19 | PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic ... | [more] |
XP_031740922.1 | 4.29e-187 | 95.19 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ... | [more] |
XP_038892676.1 | 4.09e-172 | 89.18 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa ... | [more] |
XP_023541595.1 | 1.95e-168 | 86.99 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G18975.1 | 4.0e-92 | 74.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.2 | 4.0e-92 | 74.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.3 | 4.0e-92 | 74.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.4 | 4.0e-92 | 74.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21190.1 | 6.7e-47 | 43.84 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |