Chy10G176830 (gene) Cucumber (hystrix) v1

Overview
NameChy10G176830
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationchrH10: 11197682 .. 11199640 (+)
RNA-Seq ExpressionChy10G176830
SyntenyChy10G176830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTCTCCATGGAACCTCAACTGGGTTCGATGCCCTCATGCCAAAGGTAACCAATACACCTCAAACTTCCTCAATTTCGTTTTAACAATTTCTGAACTCTTTAATCTAACCATTTATCCCTTTCCCTTATAGATAGATTGCATTTACTATCACAACAAATTCACATTTAGACCTGCCAGCGTCATTTGTGTTCACAACCAAGCTGCACAGCCCCTTACTAGTTTCACCACATCTGAGAGGTGCTCTTTTTTTTCTTTTTCCTTTTCTTTTCTTGCTTTCTGATTTTCCTTTCAACCCCGTGATTTTGATTTTGATTTTGATTTTGAATATAGACGTGTTGTTAAGAAGGTTGGGAGGGAGACACACCACTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTGAGCTGCGTTTTCTTGAATGTCCCTCCAATATTGAGAGGAAAGAGTGATAATGGCAATTAGTTTGAAATTCAAATGGCTTTCTAATATATTGTAGGTTTCCCAATGTCCTAATGAGAAAGAAGCAGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACACAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGTAGTCAATGGAAGCGTGTCATTCAAGTATGAATAAGTTTGGTTTTACTCGTTGTCTTTTTGGCCTTTGGCGAATTTGTTCTTTGCTCGGGGTGTTGATTCTAAAGGATGCAGTTGTTGTGTCTTTAAAAATCATCTTTTTCCGGCTAGTGCTTCTATTTTTTTGCTCGTTCTTTGTTCAGCTAATCTACTAGTGCGTTGGATTTTTGTTGTAATGTTGCATTTATTTGATAAGTTGTGGCTTGTTAAGTTTTTATATTGAAGTTTGTTCTTGAACCTTGGTCCTTTAGACTTCTAAGTATGATTGAACAAGAGATGACACTTGGGATTTGGTTGATACATTAAATTTATAATTTCTGTTTAAGATTTAGGAACTGATGGTTGTTGGTTCCAGATTTGTGAATGATGAAACAACAGTGTCTTTGTATCTTTGAGATAAATGTTTCTCGAACTAGAACACCAAATTGCTTAAGGCGATGTAAACCTCGGTGTTGGACTTGCAAGTAACTTGGACTTTGACATGTGAAAATATTATCTCTGATTAACAAGAGAAATTAGAAGAAGAAAAGTTTTCGTCTTTTGTCAAGGTCAATTGCTATAGTCCTTTCTGTGGTGAAGTTTGGGCTTACGAATATTTATTATGGTTTCTGTAAGCAATATTCAATAGTTGCCTATTGATATCATTTTCATATGTTGAAGTGCCTTGGCTTGATGAGAGTCGGTTTAATAGCTGCTTATTGATTCTCCCGCCTAGTCTTTTCATTAATCAATGCTTCTTATTACTCAGGTGGCCAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAATGGGAACATACGATACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCGGAATCCTTATGGAACATGATACTGCATACACATACACGTTCCATCTCTAAGCGAGTATTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATTGAGGTATTGGAAATGGGAAGTCCACATATATTGTTTAACCTCGCTATTTTTCAATTTTCTCTTCATACGTTATCAAATGATCTCATGCTTCAATTTCTTCTCTCTTGGCACAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACCGTAAGAAGAGTTGGTCGTGCCTTTCAAAAACTAGGTCAAGAAGAAAACCGGAAAATGGTCTATAAAAGATACAGTTGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTAAGAAGAGATGGATGGGATGAAGATTATCAATGA

mRNA sequence

ATGTTGGTTCTCCATGGAACCTCAACTGGGTTCGATGCCCTCATGCCAAAGATAGATTGCATTTACTATCACAACAAATTCACATTTAGACCTGCCAGCGTCATTTGTGTTCACAACCAAGCTGCACAGCCCCTTACTAGTTTCACCACATCTGAGAGACGTGTTGTTAAGAAGGTTGGGAGGGAGACACACCACTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCAGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACACAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGTAGTCAATGGAAGCGTGTCATTCAAGTGGCCAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAATGGGAACATACGATACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCGGAATCCTTATGGAACATGATACTGCATACACATACACGTTCCATCTCTAAGCGAGTATTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACCGTAAGAAGAGTTGGTCGTGCCTTTCAAAAACTAGGTCAAGAAGAAAACCGGAAAATGGTCTATAAAAGATACAGTTGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTAAGAAGAGATGGATGGGATGAAGATTATCAATGA

Coding sequence (CDS)

ATGTTGGTTCTCCATGGAACCTCAACTGGGTTCGATGCCCTCATGCCAAAGATAGATTGCATTTACTATCACAACAAATTCACATTTAGACCTGCCAGCGTCATTTGTGTTCACAACCAAGCTGCACAGCCCCTTACTAGTTTCACCACATCTGAGAGACGTGTTGTTAAGAAGGTTGGGAGGGAGACACACCACTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCAGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACACAGTTTCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGTAGTCAATGGAAGCGTGTCATTCAAGTGGCCAAGTGGATGTTAAGCAAGGGCCAAGGAGCCACAATGGGAACATACGATACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCGGAATCCTTATGGAACATGATACTGCATACACATACACGTTCCATCTCTAAGCGAGTATTTTCTAGGATGATCTCTTTGTACGAACATCATGACTTGCAAGATAAGATTATTGAGATATTTGCAGACATGGAAGAATTGGGTGTAAAACCAGATGAAGATACCGTAAGAAGAGTTGGTCGTGCCTTTCAAAAACTAGGTCAAGAAGAAAACCGGAAAATGGTCTATAAAAGATACAGTTGCCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTAAGAAGAGATGGATGGGATGAAGATTATCAATGA

Protein sequence

MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERVRVRRDGWDEDYQ*
Homology
BLAST of Chy10G176830 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 5.6e-91
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0

Query: 50  TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
           T   + +KKVG++ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE +
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

BLAST of Chy10G176830 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.4e-46
Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 0

Query: 48  FTTSERRVVKKVGR----ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKW 107
           FT     VV    R     +  +WK R   G+  KA  ++  +    N KE VYG L+ +
Sbjct: 23  FTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSF 82

Query: 108 IAWETQFPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRV 167
           IAWE +FPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+
Sbjct: 83  IAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRL 142

Query: 168 DEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR 227
           DEAE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  
Sbjct: 143 DEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSM 202

Query: 228 VGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR 262
           VG+ F KL  ++  + + K+Y   QW++ + KG RV+V+
Sbjct: 203 VGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVK 241

BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match: A0A0A0KSA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 3.0e-148
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
           YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270

BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match: A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLVLHG+STGFDAL+PKIDCIYYHNK  FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
           YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270

BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match: A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLVLHG+STGFDAL+PKIDCIYYHNK  FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 271
           YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270

BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match: A0A6J1CC95 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 232/268 (86.57%), Postives = 244/268 (91.04%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           M V  GTS GFD L+PK DCI   NK TFR AS  C HNQA QP TS  T ERR+VKKVG
Sbjct: 1   MSVYRGTSIGFDTLVPKKDCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYG LNKWIAWET+FPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISK++FSRMISLY+HHDLQDK+IEIFADMEELGVKPDEDTVRRV RAFQKLGQEENRKMV
Sbjct: 181 ISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 269
           +KRY C+WKYIHFKGERVRV+RDGWDED
Sbjct: 241 HKRYGCKWKYIHFKGERVRVKRDGWDED 268

BLAST of Chy10G176830 vs. ExPASy TrEMBL
Match: A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 234/269 (86.99%), Postives = 247/269 (91.82%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVV-KKV 60
           ML   G+STGFDAL+PK  CIY +NK  FR ASV CVH QAAQ LT  TT+ERR+V KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60

Query: 61  GRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKAL 120
           G+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKM 240
           SISKR+FSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN KM
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240

Query: 241 VYKRYSCQWKYIHFKGERVRVRRDGWDED 269
           VYKRY C+WKYIHFKGERVRVRRDGWDED
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDED 269

BLAST of Chy10G176830 vs. NCBI nr
Match: XP_011654973.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus] >KGN50596.1 hypothetical protein Csa_021408 [Cucumis sativus])

HSP 1 Score: 534 bits (1375), Expect = 3.67e-191
Identity = 260/270 (96.30%), Postives = 264/270 (97.78%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
           YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270

BLAST of Chy10G176830 vs. NCBI nr
Match: XP_008464896.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo] >KAA0051555.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 528 bits (1361), Expect = 5.00e-189
Identity = 257/270 (95.19%), Postives = 263/270 (97.41%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLVLHG+STGFDAL+PKIDCIYYHNK  FRPASVICVHNQAAQP TSFTT ERRVVKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
           YKRYSCQWKYIHFKGERVRVR+DGWDED Q
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDDQ 270

BLAST of Chy10G176830 vs. NCBI nr
Match: XP_031740922.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 523 bits (1348), Expect = 4.29e-187
Identity = 257/270 (95.19%), Postives = 261/270 (96.67%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLV HGTSTGFDALMPKIDCIYYHNKFTF P+SVICVHNQAAQPLTSFTT ERRVVKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +ETHHLWKKRDSAGSGQKALNLV   SQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLV---SQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRKMV
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 270
           YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDEDYQ 267

BLAST of Chy10G176830 vs. NCBI nr
Match: XP_038892676.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida])

HSP 1 Score: 485 bits (1249), Expect = 4.09e-172
Identity = 239/268 (89.18%), Postives = 248/268 (92.54%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKKVG 60
           MLV HG+STGFDAL+PKIDCIY++NK TFR ASV CVH QA          ERR+VKKVG
Sbjct: 1   MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQA----------ERRIVKKVG 60

Query: 61  RETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKALR 120
           +E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAAAKALR
Sbjct: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRK SQWK VIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKMV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAF KLGQEEN+KMV
Sbjct: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240

Query: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268
           YKRY CQWKYIHFKGERVRVRRDGWDED
Sbjct: 241 YKRYGCQWKYIHFKGERVRVRRDGWDED 258

BLAST of Chy10G176830 vs. NCBI nr
Match: XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476 bits (1226), Expect = 1.95e-168
Identity = 234/269 (86.99%), Postives = 248/269 (92.19%), Query Frame = 0

Query: 1   MLVLHGTSTGFDALMPKIDCIYYHNKFTFRPASVICVHNQAAQPLTSFTTSERRVVKK-V 60
           ML   G+STGFDAL+PK  CIY +NK  FR ASV CVH QAAQ LTS TT+ERR+VKK V
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQFPLIAAAKAL 120
           G+E HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWET+FPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRK SQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKM 240
           SISKR+FSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKL 240

Query: 241 VYKRYSCQWKYIHFKGERVRVRRDGWDED 268
           VYKRY C+WKYIHFKGERVRVRRDGWDED
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDED 269

BLAST of Chy10G176830 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0

Query: 50  TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
           T   + +KKVG++ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE +
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

BLAST of Chy10G176830 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0

Query: 50  TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
           T   + +KKVG++ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE +
Sbjct: 42  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101

Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161

Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221

Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254

BLAST of Chy10G176830 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0

Query: 50  TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
           T   + +KKVG++ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE +
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

BLAST of Chy10G176830 vs. TAIR 10
Match: AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 4.0e-92
Identity = 159/213 (74.65%), Postives = 187/213 (87.79%), Query Frame = 0

Query: 50  TSERRVVKKVGRETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETQ 109
           T   + +KKVG++ HHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE +
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRK SQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +R+F+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKMVYKRYSCQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

BLAST of Chy10G176830 vs. TAIR 10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 6.7e-47
Identity = 96/219 (43.84%), Postives = 132/219 (60.27%), Query Frame = 0

Query: 48  FTTSERRVVKKVGR----ETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKW 107
           FT     VV    R     +  +WK R   G+  KA  ++  +    N KE VYG L+ +
Sbjct: 23  FTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSF 82

Query: 108 IAWETQFPLIAAAKALRILRKSSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRV 167
           IAWE +FPL+   KAL IL    +WK++IQV KWMLSKGQG TMGTY +LL A   D R+
Sbjct: 83  IAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRL 142

Query: 168 DEAESLWNMILHTHTRSISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR 227
           DEAE LWN +   H     ++ F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  
Sbjct: 143 DEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSM 202

Query: 228 VGRAFQKLGQEENRKMVYKRY-SCQWKYIHFKGERVRVR 262
           VG+ F KL  ++  + + K+Y   QW++ + KG RV+V+
Sbjct: 203 VGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKVK 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q2V3H05.6e-9174.65Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop... [more]
Q8LG959.4e-4643.84Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0KSA53.0e-14896.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1[more]
A0A5A7UD211.3e-14695.19Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CP501.3e-14695.19pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... [more]
A0A6J1CC957.5e-13186.57pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... [more]
A0A6J1FWG37.5e-13186.99pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
XP_011654973.13.67e-19196.30pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... [more]
XP_008464896.15.00e-18995.19PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic ... [more]
XP_031740922.14.29e-18795.19pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ... [more]
XP_038892676.14.09e-17289.18pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa ... [more]
XP_023541595.11.95e-16886.99pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT4G18975.14.0e-9274.65Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.24.0e-9274.65Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.34.0e-9274.65Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G18975.44.0e-9274.65Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21190.16.7e-4743.84Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 76..247
e-value: 5.1E-14
score: 54.0
NoneNo IPR availablePANTHERPTHR46782:SF2OS07G0545900 PROTEINcoord: 14..266
IPR044646Pentatricopeptide repeat-containing protein EMB1417-likePANTHERPTHR46782OS01G0757700 PROTEINcoord: 14..266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 8.6266

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G176830.1Chy10G176830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding