Chy10G175630 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGCAACAATAAGACAACAAACTCCACATAAGTTCTTGATCAAGTCTCCAGTGTCAGCTTCAAAGTTTCAGGTGAAGATTAGCCCAACAGTGATGATCAACCGATCGCCTACGAGACCAGTAGTGATCACAAGATCGCCAACGAGACAGATAAGCTCGAGTAAGTTGTCTCCAAAGAGATCCACTGCTTACAAGCTGCGTCGGTCGTTTTCACCGTAA ATGATCGCAACAATAAGACAACAAACTCCACATAAGTTCTTGATCAAGTCTCCAGTGTCAGCTTCAAAGTTTCAGGTGAAGATTAGCCCAACAGTGATGATCAACCGATCGCCTACGAGACCAGTAGTGATCACAAGATCGCCAACGAGACAGATAAGCTCGAGTAAGTTGTCTCCAAAGAGATCCACTGCTTACAAGCTGCGTCGGTCGTTTTCACCGTAA ATGATCGCAACAATAAGACAACAAACTCCACATAAGTTCTTGATCAAGTCTCCAGTGTCAGCTTCAAAGTTTCAGGTGAAGATTAGCCCAACAGTGATGATCAACCGATCGCCTACGAGACCAGTAGTGATCACAAGATCGCCAACGAGACAGATAAGCTCGAGTAAGTTGTCTCCAAAGAGATCCACTGCTTACAAGCTGCGTCGGTCGTTTTCACCGTAA MIATIRQQTPHKFLIKSPVSASKFQVKISPTVMINRSPTRPVVITRSPTRQISSSKLSPKRSTAYKLRRSFSP* Homology
BLAST of Chy10G175630 vs. ExPASy Swiss-Prot
Match: Q197W8 (Microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-06 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy Swiss-Prot
Match: Q84M91 (Probable microtubule-binding protein TANGLED OS=Arabidopsis thaliana OX=3702 GN=TAN PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-06 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy TrEMBL
Match: A0A5A7U154 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00260 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20 Identity = 65/94 (69.15%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy TrEMBL
Match: A0A5D3D444 (Microtubule-binding protein TANGLED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00190 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-20 Identity = 65/94 (69.15%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy TrEMBL
Match: A6YTD5 (Microtubule binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 64/94 (68.09%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy TrEMBL
Match: A0A1S3BZ63 (microtubule-binding protein TANGLED OS=Cucumis melo OX=3656 GN=LOC103495028 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 64/94 (68.09%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Chy10G175630 vs. ExPASy TrEMBL
Match: A0A6J1KAM7 (microtubule-binding protein TANGLED OS=Cucurbita maxima OX=3661 GN=LOC111493748 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12 Identity = 52/74 (70.27%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Chy10G175630 vs. NCBI nr
Match: KAA0047966.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (272), Expect = 3.77e-26 Identity = 65/94 (69.15%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Chy10G175630 vs. NCBI nr
Match: TYK18310.1 (microtubule-binding protein TANGLED [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (272), Expect = 4.21e-26 Identity = 65/94 (69.15%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Chy10G175630 vs. NCBI nr
Match: XP_038877022.1 (microtubule-binding protein TANGLED [Benincasa hispida]) HSP 1 Score: 106 bits (265), Expect = 3.17e-25 Identity = 59/74 (79.73%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Chy10G175630 vs. NCBI nr
Match: XP_008454676.1 (PREDICTED: microtubule-binding protein TANGLED [Cucumis melo] >ABR67412.1 microtubule binding protein [Cucumis melo subsp. melo]) HSP 1 Score: 106 bits (265), Expect = 4.19e-25 Identity = 64/94 (68.09%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Chy10G175630 vs. NCBI nr
Match: XP_011648821.1 (microtubule-binding protein TANGLED [Cucumis sativus] >KAE8651599.1 hypothetical protein Csa_023440 [Cucumis sativus]) HSP 1 Score: 105 bits (263), Expect = 7.79e-25 Identity = 65/94 (69.15%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Chy10G175630 vs. TAIR 10
Match: AT3G05330.1 (cyclin family ) HSP 1 Score: 51.6 bits (122), Expect = 3.1e-07 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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