
Chy10G175580 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTAAGGATGTGAATCTGACAATCGCCAATTTATCAATCACTCATGATTTCCTTCCTCTACCACTTGGGAGTGCAGATGTCATATTAGGAGTTACATGGCTGGAAACTTTGGGGAAAGTGATGTTTGATTACAAGTTATCAGAGATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGAACAGAAGCCTTGTTAAATCATAG ATGTGTAAGGATGTGAATCTGACAATCGCCAATTTATCAATCACTCATGATTTCCTTCCTCTACCACTTGGGAGTGCAGATGTCATATTAGGAGTTACATGGCTGGAAACTTTGGGGAAAGTGATGTTTGATTACAAGTTATCAGAGATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGAACAGAAGCCTTGTTAAATCATAG ATGTGTAAGGATGTGAATCTGACAATCGCCAATTTATCAATCACTCATGATTTCCTTCCTCTACCACTTGGGAGTGCAGATGTCATATTAGGAGTTACATGGCTGGAAACTTTGGGGAAAGTGATGTTTGATTACAAGTTATCAGAGATGGAATTTTCATTGGGAGAATTTTTGGTGATTCTACAAGGGAACAGAAGCCTTGTTAAATCATAG MCKDVNLTIANLSITHDFLPLPLGSADVILGVTWLETLGKVMFDYKLSEMEFSLGEFLVILQGNRSLVKS* Homology
BLAST of Chy10G175580 vs. ExPASy TrEMBL
Match: A0A5D3CTU6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00600 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Chy10G175580 vs. ExPASy TrEMBL
Match: A0A803QCP9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Chy10G175580 vs. ExPASy TrEMBL
Match: A0A7J6FAX8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011323 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-09 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Chy10G175580 vs. ExPASy TrEMBL
Match: A0A7J6DK88 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_001093 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.3e-09 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Chy10G175580 vs. ExPASy TrEMBL
Match: A0A5C7IJS7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.5e-09 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Chy10G175580 vs. NCBI nr
Match: XP_031737572.1 (uncharacterized protein LOC116402461 [Cucumis sativus]) HSP 1 Score: 123 bits (308), Expect = 5.75e-31 Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of Chy10G175580 vs. NCBI nr
Match: KAA0039528.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15281.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (258), Expect = 8.10e-24 Identity = 50/58 (86.21%), Postives = 55/58 (94.83%), Query Frame = 0
BLAST of Chy10G175580 vs. NCBI nr
Match: XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida]) HSP 1 Score: 81.6 bits (200), Expect = 5.63e-16 Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Chy10G175580 vs. NCBI nr
Match: XP_038907170.1 (uncharacterized protein LOC120092972 [Benincasa hispida]) HSP 1 Score: 80.9 bits (198), Expect = 6.61e-16 Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Chy10G175580 vs. NCBI nr
Match: XP_010521015.1 (PREDICTED: uncharacterized protein LOC104800012 [Tarenaya hassleriana]) HSP 1 Score: 70.1 bits (170), Expect = 3.33e-13 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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