Chy10G173690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G173690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Splicing factor YJU2
Location	chrH10: 4219954 .. 4232480 (+)
RNA-Seq Expression	Chy10G173690
Synteny	Chy10G173690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGGTTCGTATGATGCTTCCTATGAGCATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACAAAGTTTAATTCTCGCAAGGAGGACGTCATTGGTGAGGCAAGAGAATCCCTTTTATTTTTTTAACCTAAAATATGTTTGTTCCTTTTGCAATTGATTTTCTGATTTCTCATGTATTTTTTTCCTTTTACTTCAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAACACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCGAAACGAGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGGTTTTTGTTTTATTACCCTTTGTTTTGTCATTAAGATTCTTGGGTTTTGATTACTTTCTTGGAGTTGTGGCTTTGAACAAAATTCTTATTTGTTTCTTGATTTTAACATCTTCAATTATTAAGTATAGTTTATTGTTTAAAATAACTTGGTGGGTGTTTGTTCCGCAGTCGAGACATGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCCGCTGAAAAGGTACGTGTAGCACTGCCTTCATGAAAACAGTTTGACATGAAATGTATGTGATAAAATATTGAAAACAGAAGCCTGGATTCTGTCTTTTAATTTCGAGCATCATTTTAAATATTTTGAGATATTGAGCAGTATACACTTTGCAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATGTGAGTTCATTTTTCCTATATGTTTTTCCTCTTCCATTGAAACCATTTACAGTTGTTTCTTTTTGTTTCCTTGGAATTAGAATTTTTCATATGCTTTTGTCAATACTCTTGTGCAGAACTCAAACAGTTATGTTAGAAGGATTTCAGATGATGAATTTGATGATGGTAGTATTGTTCAACTTTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGGTAATAAAGTAATAAATGAAGTTATTTTCTATTCCTTATATGAAGATTTGGATGAATAGTGAGCATTAGAGGTGTGAGATACATTTGTAAACCGGATAGGGTCTTTGAGAAGCTCATCTATTTAGCTTATTCTTAACTCCTTGACATGTTAACTATTTCTGCAGAATTTTATCAAAGGTAAATCTGGTGATTAGGATGAATTTTCAGGATTTTCAAAAGTAACTTAAATATGCATAAAGATACTATTTGTGCCAACTAAATGTCATTGGAGCACTCAAACATGCATATGCCTTCTAAAAAAATGCATTTGCCTTTTCTCATTGGCATTTCTATCTAATTGTGAATCTTTAAGTGAAGCATACAACAAAATTGCTACGTGTTTTTTTCTTTTTTTTTGCTAGCGTGAACTTCATTTGAGTGTGTATCTTAATTTGGGAAGGATAAGAACTAAGAAGTGGAGTATGTTTGAGACTTGTTCTTGCTATTGAATTTTGAAGTATGTATTATTTCTTTGCATAGAAGATTGCTAATTAGACCTATTTGTAGCATTCAAATTTGAATGTGCCTTTTCTCATAGCATTTCAATCTATTTGGATTGCAGAAGCAGAGGGTTTCTGAAGGATCTCCTCATGATCCTACAAGTACTTCAACAAAAGCTGGTTTTCTCCATAGCCGCATGGGTGAAGGTACCCTACCTTTTATTTTTATTCTATCTACTTTTCTAAGGAATATATTGGGAAAATAGTGTGAATGTTACAAATATATACTAATCTTTAATTGATTGGCCCCTTCTCTCAATATTGCAAGAAAAAGTTTTTGGTAGAAGCTAGTGCTGGGTATAAAAAAAACTTCTCTATTATTTTCTCTCTTCATGAGAAGGTTACAGTTGATAGGAAGGCCTTTTCAATTCAAAAGAGGGGAAATGGTAAAATAATAGTTATTAAGAAACCTTTCAACGATTGTGAACGAATGGAAAGCGTTCTTATAGTTCTTTTGGGAGGGGATTCTCTCTACCTCTCTTACCCCAACCCCTAGGCTGTTTGTTCTCTCCTTTTTTGATCCTTTCACGTTTCTTATAAAAAAGATTGTTGCTGAGAAATGAGGGGTTCATGGGGAGGAAAATCAAGATGATTTTGGTTTGCAAGTGTGGAATTTCAAGTTGGTAGCACTTAGTTTAAGGTAGGAAATTAGAGTTTACAAGGAATTGGGTTACGGTCTCAGATGTGTCTTTTTTCTTCAAAACAAGTCAGTTTGTATCTGTGCTTTTCTTTCTTAAAACAATTTGGGACCCATCTTGAAGGGAAGGTGAAACAAAGGGATATGGAGAAACTCTTGAAAGGCATAAAAAAGATTCACCTTTTATCTTCTCCTTTTGTTTTGTGTTCTGTGGGGATGGGAAGGAAATAGTTTTCGGGAGGATAAGTGGATTAGGGATAGCCCTCTTTACTGCTCTCTTTTTCCATGTTTTTACCATTCATCCTCAATGAAGAATCAATCATTTGTTGTTATCTTTCCCCATTCTTTGGATTTTATTGTAGTTTGCCTGAGAAGGAAATGGCAAAAGTTATTGCTATTCTTTCCTTGAATTGGGAAGTCTTGCTGTAATCCAGATGTTTGTGGTTGGAGTTCTCTCAATTGACGGTTTTTTGTGCAAGTCCTCTTTGCTTGGCGGTCCTTCTCCGTGTGAGTTCTGGGTTTTTGCCTTGTTGCAGAAGTTAAAAATTATCAAGAAGGCCGAGTTTTTTACTTGATATGTTATCCACAGAATAGTTCACAAGTTGGATTGGGTTTTGAGCAAAGTGCCCAATTTGTCTGGTTTGTGGTCTTACGTTGTTTGTAGGAGGGAGGCAAAGGATCTTAACCATATATTTTGGAGCTGTGATCTTGCTTATTGGTTTGCAGTTGGTTTTTGAGGAGTTTGGCCTCGTTTTGGCTAGATTTCATGAGAAAGGTTGTTTTGTTGTGGCAAGTCATGTTGTGTACTCTTTTGTGGAGCCTTTCGTTGAGAGGAACAGTAGAGTTTTTAGAGGGGTTGAGAATTCTTCGAGTGATCTTTTTCCCTTATTGAATTTAATGCTTCATCGTGGGCTTTTAGTTGAATATCCTTTTTGTGGGTGTTCCTAATTGTTCACTTGTGTATTCTTTCAAATTTTTTTCAACTAAAACTTTGTTATTCATGAATATATCTATCTATCTATAGTATACTATATATAAAAGAGGCTAGGATGAGAGAATCTTTACATCCCTGTTATGCTTGTATAATGCTTCATAATTAATATTATGTCCTCCGTCACAATGATTCGAGTCGAGGTGGTTACATGTGAAATGGTGTATTCTTCTATGTATCAGCGTGATCTAGATCATAAATATGAAACCTTATGATCTAAAGTAGAGACATTTTTAGAATGGACATAAGATATATTATTACTTATTAGTTATAATCTTTTAAATTTTTTTCTCCATGCACTAAAAATAAACTATAAATGTCACGTGCATCACTTATGGACTAGTATATGTATGTGCTATGGTAAAGATATTTATTTTTATAATATTTTTGTAGCTATTGTGTCAAGAAAAAATAATAAAGAATCTCTTCTAATCCCATTTCTCTCTCCTACTGGTCCTCAACCCACCCTCACCTCTGTGAGATCCCTAGTTATAGAATAAAGGAGTATGGCGAAAATTAATATGGTTTTAGTTGGGGGCATTTTAGTAAATAGTTAGGTCTTTTTGCTTTATATAGTAGGAGGGGTGGGGAAATGTGTGAAGAATTTTGTTAAGGTTTTCCTAATTGGGGAATTTGGGAGAGGATTCTCAGCCCTCTTGAATGTTTGAGGTATATTGTCATTTCTTCTTGATATTGTGTTAGGATCCCACCAAACAAGAATTATCTCAAGAACAGTAAAAGAACAATCAAATAAGAAGATATATGAAATGTATGCTAGAATACCACAAGAAAAAGTTACAAGTAGCAAGTAACCCCTAGCCTTTTGAGAGGGCTAGACTCTCCCCAATTTCCCAGTCAAGTAAATCCCACAAAATTCTTCATATCTTTCCCTACTCCCTTCTCTTTCTATTTATAGCAAACATAGCCTAACCATCTTATAACTAATTACTATATACCCCTCTTGAAACCCATACCATTACTCTACTAATAATCCAATATTTTCCTATTTAGGGGTTTTGCAGTACTCCGCCCTTCGAAGACAGCTTGTCCTCAAGGTATACTTACAAAATACGATCACAAAAGAATAAACGGGCAGTTTTTTTCTTATGAAATTTGAACTCTTTACCCGACGCCTGCCTTCTCTGAAGAATTGGTCTTATGTTTAGCCTTGAAATTCCATTGAATTCTCCATAAACTCCCAAAATCTTCATTCTACTCACATGGCACGTGACCCTAATTAACCAGCTGTACAGCCTCGAGCCCATTTCCACGCCACTTCTATTGGTACTTTAATATGAAGCTCTTCTTCTCTAATGGGATAAGCCCATAATCAACTTTATGCTCCTATCCCCAATTCAGTTTCAGGGCCTGTACATCATCTTCCCTAGAATTCCCAATGAGCTTCAGCCAATTCCATTTCATTTTTGAGTTTCTTTTTGCCACCCTGACAAATGGGCCTCAATGAATTTAACAAATTCAAACCCATCAATCCCCTTTCTTCTTTCTTTATGAGGGCTGCATTTCCCTGTTTTCAGCATCTCTTGTTTGGCCCACCACCCATATTCCCATAGGGGTTCAACTTCCTTAGATAAAGTCATTAGACTTTTTTCCTTTGAGAGATAATGGGCCTCCTCCACCAATTTTGTAATCAGCCCATTATCAACTTTTTGGCCCACTTTTGATTAGATTCTTTTCCCAATTGCCTTTCAACGTGGTATGATTAGAGACAATGGGCCTCCACCAATTTTACCATACTCATTAAGGGTAATTACGTAAAGACAGAACCACCAGTGAAGAGTCTCTTAGATTGTGAATTTAGGGCATGATTGGATAAATGGATGTGCTTTTGTTGCAACGAGTACTCCCATGGCCACCTTTGCAAGGTAAGGGAGAATTACGAACTGATGTTTATCATGAACGAAGAAGAAGAGATTGAGGTTTTGGCAGATTTGGGTGAGTAAATTACGACCATGGATGAAGAAATGCAATTGGTAGAATTGACTTCATTGGAAGTACTAGATAAGACAGAAGTAGCGCTACAGTCCATTTTGGGATTTTCTACGAATGGAGTGATGAAATTGCAGGGTTCGATAAAGTGCTAACATGTGATTGTGTTGACTAATAGCGAAGCAATCCGCAATTTTATCCACCAACGGTTAGTGGAGAAATTGAACTTACCCATTGTAGAAGAGTGAAAATTCGGGGTGACAATTGGGGATGGAACAATGTGAGAAGGAAGGCGCATTTGTTGAAGAGTTGAAGTGGTTTTGGATAATTATTATTGTGGCCAATTTTTTAGCCATTGAATTGGGAAATATGGATCTAATTCAAGGAATGCAGTGGCTACTCATGATGGGGTTCATGGGGGTACATTGGTCGTCCATGAGGATGACGTTTAGGGCTGGTGAAGCCAAGTGATTCTTAAAGCGGACCCATCCCCAACGAAGGTTGAATGTTCATTGAAAACACTCACCAAGACCTAAGAAGAAGATGATCAGGGACTCTTAGAGAATTTCACAATTTGGAGATTGAAACAGAAAGTGAAGGAGTGGAAGAAACCAGTGAAAAAGAGGATGGTGAAGAACTTCTGTTAATCTGAGCATTGTTGGAGCAAAATGAAACTATCTTTGAGTTGCTGAAGGGCTTGCCTCCAAAAAGGACTACTGACCATCTTATCCTAACTCTGAAAGGACAACAACTAATAAATGTTAAACCGTACAAATATGGATATATCCAGAAGGTTGAAGTTGAGAAATTAGTAATGGAGATGCTATAGGCTAGGATCATTTAGCCGAGTTGGAGTCCATTCTCGAGTTCGATACTTATGGTAAAATAGACAGATGGAGGGTGGTGGTTTTGAGTTGACCATCCCAAGTAACAATCGCGACAAGTTCCAATACCAGTGATTGAAGAAATTAGATGAATTACATGGGCTTAAATTAGACCTGCGTTCGGGGTATCATCAAATACGAATGAAAGAGAGCGATGTAGAGAAAACTACCTTTCAAACTCATGAGGGCCTCAATGAGTTCTTATTCATGCTGTTTGGGTTGACCAATGCACCGACTACGAATCATGTATTTCGACCGTTCCTAAGATGATTTGTGTTGAATTTACTTGACGACATTTTTGTCTGTAGTACAGATATAACTGAAAATGAGAAACATCTTGGGGTGGTCTTTAACATCCTCAAGGATAATAAATTGTTTGCGAATCGGTATAAATGTGTTTTCGGGCATAGAGGATCCAATACCTGGGCCATTAGATATCAATAAAGGGGTGGAAGTAGATGGTGAGAAAGTAAAAGCTATGATTAGCTAGCCACAACCTAAAGATGTGACAGAACTACGTGGGTTTTTGGGGTTAACTCGGTATTACAAGAGGTTTATGACAGGGTATGGAGATATTGCAACCTCATTGACCAAACTGCTACAAAAAATGCTTTCAACTGAAACGAAAAGGCAACCAAGGCTTTTGAGCAAATGAAATACACCATTGAAACACGCCATTATAACAATCCCAGTGTTGGCTTTGCCTGATTTCTCACTTCATTTCACCATAGAAACAGATGCGTCGGGAGTTAGACTAGGGGCAGAGTGCTTAGTCAGGATGCTAAACCCATTACTTACTACTGTCAGAAACTATCGCCTAGGGCCCAAACGAAGTCCATCTATGAAAGAGAACTTATGGCAATAGTCATTGCAGTGCAGAATTGGCGACATTATTTTTTGGGCTAGAAGTTCACTATGATATCTGACTAGAAAGTTTTGAAATTCCTCATTGAGCAGATAAAGGTGCATCCACAGTTTCGAAAATGGTTAATGAAATTACTGATTTATGACTTTGAGATAATATATCATGCAGGGCTACAAAACAAAGCTGTTGATGAATTATCTAGAGTATCTCATTCTGTGGAGCTGACAGTCTTGTCAGCCTCAAGTATTATGGATGTCGAAACTGTGCTTGAAGAAGTGTGGAAGGATGAGGAGTATAGAAAATAGTGAAGAAATTGGAAGAGGACCCGAAAGGAAAGGCAAATTATCAATGGGTGTGAATCAGCGGCTATTATACAAAGGGAGGTTAGTACTTTCTAAGACTTCAGTTTTGATACCATCTCTATTACACACCTTCCATGATACAATCTTAGGGGGACACTCGGGTTTTCTTCGGACCAATAAGAGGATGAGTGGTGAATTGCATTAGCTAGGAATGAAAAATGAAATTAAGAAATGTGTAGAGCAGTGCTAGATTTTCCAGAGAAACAAGACTAACGCTACAATCCTAGCTGGGTTTTCTTCGGACCAATAAGAGGATGAGTGGTGAACTGCATTAGCTAGGAATGAAAAATGAAATTAAGAAATACGTAGAGTAGTGCGAGATTTTCCAGAGAAACAAGAAAGTGCAAGACTTTCCAGAGAAACAAGACTAACGCTACGACCCTAGCTGGCCTCTTACAACCGCTACTCGTACTTGAGTTAATTTTGGAGGATTGGACCATGGACTTTATCGGATTGTCGAAATCAAGGGGATTCAATTCCATAATGGTCGTAGTGGACAGGCTCAGTAAAATTTTCCCATTTCATCACACTTAAACACCCCTTCACAGCCAAACAAATTTCAGAAATTTTTATTGAGAGTGGTAAGTAAGCATGGGGTCCCAAAGTCTAGTATCATGAATCATGATAAAATATTTTTTGTAATTTCTCGAAGGAGTTATTCTCGACCATGGGTACTACCGTATAGAGAAGCACAACATTCCACCCCAGACGAACGAGCAAATGGAGAGGGTCAACTGGTGTTTGGAAACTTATCTTTGCTGTTTCTGCAATGAATATCAACTAAATCGAATAAATACATTCCATGAGTGGAGTTGTGGTATAATACCACATTTCACGCTTCATCAAAGTCTACCTCGTTTCAGTGTGTTTGGAAGACCACCACCTCTGTTAGTGTCATATGGGAGCAGAAAATCAGACAATAATAAACTATCATGGGTTGGTTTAGTGGTAAAAAGGAGACAGTTTTAATAATTAACTAAGAGGTCATGAGTTCAATCCACAATGGCCACCTACCTAGGAATCAATTTCCTACAAGTTACCTTGACACCCCAACTTTGTAAGGCCTGGCGGGTTGTCCTTGAAATTAATCGAGGTGCGCCTTAGATGAACACTCACTGATATAAAAAATCGGCCAATAATAGCTCTAAACAGTTGTTGATGGATAGAGATTTGGTGATTAATGCCTTAAACGAAAACTTGGTGATAGTTCAAAACCGAATGAAGAAACAAACTGATTTGCATAGGAGAGAGTTGAAATTTGAGGTGGGGGATGAGGTTTACTTGATGTTGAGGTTGTATCGACAACGCTTTCTAGCAAGGAAAAGAGGTGAGAAATTATCCCCAAAACTCTATGGCCCTTACAAGGTAAGGGAGTCCATAGGGGAAGTGGCGTATAGATTGGAACTACCTCTGGGGACATTTATACATAATGTCTTCCATGTCTCAATTAAAACTCAAGTTGGGACATGCTCGTGTAACACATTCCACCGACCTTGACTGAAATTTTGAACTACAAATGATGCCAGAATTAGTTTTGGGTGTTCGCTGGGACAGTGAGTTGGGAGCTAATGAATGGTTAGTTGAATGGAGGGGCTGTCCCGACAGTGAGGCAATTTCCTTTGTTTCACCTTGAGGACAAGTTGCAATTCGAGGCCAGAGTTATTGTTAGGCCCGCAATCATTCATACATACATATAATAGGAGCAAATCAGGGGAGGGCATGTTGCGAAATAAACAGAAAACAAGAGGAGAGTATTCTGGAGGGGCTCACTAGGGAGGAATATATAAGAAATGTTTTTAGGGATCAGGGAGGTAAGTAATAATTTGGGAAAAGCTAAGCTTTTTGGGAGAAGGATCTAGCCTTCTTGAAGGAGCTGGGACACGAGTCTTTCCTTACTGTTTTCTTACTATCTAATCTCTTGTTGCTATTACATATAAAGATAGTAGAGTACTGTCTTTGTTTCTCCATTTGTTGTCGGGATTTTCTGAAAATCCCGGTTTTCAGGGGAGAGTCCTAACCGTTTAATCAACAATCCCTTCACTTTTTGAAGGGAGGAATAAAGCGGAAGTTGATGGTGTGCTTTTAAAGAAGAAAGAGAGTTTTTTGGCTTCTCCCACTTTATTGCTCACCATGAACCCAAGAAACATTCAACCTAATTTCCTCTGATTTAGTCAAATTGGCTAAGTGTCAGTTTTCTACCGCTCCAACTTCCACCGTTAGAAGATCTCTCTCTCCTACTTCTTGAGCGTCGGTCGTCCCTTTTGCAAAGTTCGAGTCAATACTCATCATAGCTTCTTCTAAAAAAAGCCTCAAGCCTCTCCTCTTCATCCACATTTTTATCTTCTTCATCTCGGGCATCATCGACTAGATCCAATCTAAGAGATACTTCCAAAAAGCATACAAAATCAAAGAAACCCCCCCTTCCCTTTAAGACGTTCCCCAAGCATTTTGTTAGGAGGCTGAAGGATCTCTTAAGAAGGCACTTGTAGAGACAAAGATGTTGTCAGACCAAAATCTTCAAAATTCTGAACTTTTAAAGTTAAAAGACACTCAAGGCCAAGTTTCTTCATCTTCAATTAGGACAGACACCCTGAATTTAAAAAAAAAGGTACCTTAATGGAAGAATTAATTTTAGATCAAAACCTCAATTCTTTGTTGCACACGGATTCAAGTTCCTTTTCTTTCAACTGGGTTAGTCGCCAGAGATCTTGACTTCCACATTTTTAATATTCTGTTTGTTTTTTACCTTCCTCGAAAGTAAAAATTTTTAGAGGCTTTCCTTGCCAAACTCCGGGCCCTCCATCCAAGAAGAAACGTGACTCAGATTTTGAATCTCCTTTTATCGTGACCAGTATCGAAGATGATCATTTGATTGCTAGATGAGTTGGGGGATCATTCTTTGAAGGACCCCCTAGAAACTAATCTCAATGATTTGTTTCAGAATGAAGAGGAATTGAATTATGGGAATTAGACCTCTGGAAACCTCTCTCAGTCTAAGCTCTCCGAAATTCCGGCCGTTTAAAGTCGATAGTAGAAAAATGCAAACTAGTTTTCATTTGAGATCTGATTTTAGTCACCCTTTGGGAGATTGGGATTCAAGTCTCTTTTAACACTTAATTGAGAACTGGTACCCCCTATATTCATTGAAAAAACTGGGCTTTGTTTCCAACCGATCGATCAATCATCACATTTCATCTTAGTGAAGTTTCAGCAAGGATGGCTGTTGTTCTCTTGGCGGTCCCCTCTTCTCTCACCTTGAAGCTTGTTGTGGGCAACATATTTTCAACGATAAGATGCTGAAGATTAATGTCAAAAGATGTATACGTACAGCAATCAAATTGCTGAAGAAATATTTTTCCAAGGTAATCAAGGAAAGGAAGCCTCCGATCTCATTATGAGGACTAGAGCTGCACCATTTGTATGAAGCAACAAAAGAACAGTAATAGCTGTTATGATACAGTTGATGGAAAATGAATCGGCAGTTCAAAGATTCAAACTGAGGTTTATGCGACTGCATCAGTTTTGAGGCTGTTGGTTTGCATCTTCTTGGCGTCTCTCTTTCTCCTTTCATCTTGAAGATTTGGGCGTGCAAGATTTTAGATTCAAATGGGTTCCTTTTGGGAGAGATTTTAAGTTCAGCTTTGTATTTAACTTTCTACAGTTGTTTTGTCTTTAAGTGTTTTTGTTTAGCTCGTTATTTTTGGTTGGAATTTATTTTTAGGTCGCCATCATTTTTACGTTGCCACCATTTTTACGTTGCCACCATTTTTAAGTTGCCTAAGTATGGCCTTTGTTTTAGTCAAATGTATTCTTCCCTAGCTCTCTTTGCTCTTAGTATAATACTCTTGCACCTTGTGCTTTAGTCTCTATCAATAAAGAAGGCTTGTTTCGTTTTAAAAAAATCTATATTTTAGTGCTCTTTGGTGTGTTCCTTTGTTTTTTGAGTCTTCTTGTTAGGTGGTATCCTAACAATCTTCCCTTTTCCCGTTTTTCCCAACCTTTGGTTGTTGTCCGCCTCCCACCTCTTTTCAGTTTCGAAGAAGCTAAAGCCATTTGAGATTACTCTTTTCATTGGTTGCCAATTTCCTTCTTTGTTCCCTCCACTTAATATATATAATATAAGTGTAAAGAAATCGGGTGGTTATTTCACAAGCTCCTTCAACCTATGGAGCTCCACCAAATAGCCATTGTTAGCTGTGGTGTGAGGTTGGAAATATGATGGAGAGTGGGAACATGGACATTAAGTAGAAGCTAAAATCGAAACCTTGTGGGCTGTTCTTATGTTAACACTACTAATTTTGACTATATTTGAAAAGCTTCTTCAACCTCTTGAATAAAAAGCATCTACTATGGGGTTCTCCTTGGTTTTTTTTCATTAGTTGGTCAGTAAGGGCAACAGATATTACTAGATCTTTTTTGGTACTCTATTCAATCTTGAGGTTCCAACCAAGTTGATCATGTGTCGTATTCAACTAACCGGTGCAATCATGGTTGCTGCTCTCTTTACAAGTATAACATGTTACTGTTTCAGGCTATGGTACATCTTTCTAATAAATATCTTTCAAGGCACTTTCAATTCCTTCTTCTTTCTTTCATTTCTTTTCTAGCTTAACAATGATATACAAAGGAATGATTCGAACCTTAGGGGTTATGTTTTGCCATTTGAGTTATTTGAGCTATCTCATGTTGGCTTTATTTATTATTTTAACATGAAACAGTCTTCATTCATACGAATATTGCTAACTATTTTGCTGCATTACAATTAAGAAAATAAGTAGAATACTATATGTGAGATGCAATTGCATCACAGTTGAGTTGATAAACAAATTAAGTGCTCAAATTTGATGAATTTGCTCTTTTTTGTTACTTTATTGAACAGGTGAAGATGGCAACGTTGGGACGTCTACTGATACTAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCAGGTGGAGAATAAACAGAGCTTGCAACTTCAAAGCAATGGTACCAAAACTGGACTCGAGTCATTGTGCCAATACGACAGTGATGAAGATTGA

mRNA sequence

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAACACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCGAAACGAGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCGAGACATGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCCGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGGATTTCAGATGATGAATTTGATGATGGTAGTATTGTTCAACTTTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGAAGCAGAGGGTTTCTGAAGGATCTCCTCATGATCCTACAAGTACTTCAACAAAAGCTGGTTTTCTCCATAGCCGCATGGGTGAAGGTGAAGATGGCAACGTTGGGACGTCTACTGATACTAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCAGGTGGAGAATAAACAGAGCTTGCAACTTCAAAGCAATGGTACCAAAACTGGACTCGAGTCATTGTGCCAATACGACAGTGATGAAGATTGA

Coding sequence (CDS)

ATGGGAGAGAGGAAGGTGCTTAACAAATACTACCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGACCCAAAAACCAGCAAATGAAGACATATTTGGGAATTCAAATTTTTAGGTTCTACTTCAAGTGTACCAGATGTTCTGCTGAGCTTACCATTAAAACAGACCCCCAAAACTCAGACTATGTTGTAGAATCAGGAGCCACACGTAATTTTGAACCATGGCGTGAGGAGGATGAAGCTTCTGAGAAGGAGAAACACAAAAGGAATGCGGAAGAGATGGGGGACCCAATGAAATCTTTGGAGAATAGAACCTTGGATTCGAAACGAGAGATGGACATTCTTGCTGCTTTGGATGAGATGAAGTCTATGAAGTCGAGACATGCAACTGTGAGTATTGATTCAATGCTTGTGGCTTTGCAACGAACTGCCGCTGAAAAGGAAAAGAAGTTAGAAGAAGAAGATGAAGCACTGATAAAATCAATAGTCTTCAATAACTCAAACAGTTATGTTAGAAGGATTTCAGATGATGAATTTGATGATGGTAGTATTGTTCAACTTTTGACCAACAATGATATAGCATCGGACTTTAAAGCAAAGAAGCAGAGGGTTTCTGAAGGATCTCCTCATGATCCTACAAGTACTTCAACAAAAGCTGGTTTTCTCCATAGCCGCATGGGTGAAGGTGAAGATGGCAACGTTGGGACGTCTACTGATACTAAATTTGTTTCGAAATCTTTTCCGGTCATAGTTTCTATTAAAAAGAAACCAGAAGTGACTGCTCAGGTGGAGAATAAACAGAGCTTGCAACTTCAAAGCAATGGTACCAAAACTGGACTCGAGTCATTGTGCCAATACGACAGTGATGAAGATTGA

Protein sequence

MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQLLTNNDIASDFKAKKQRVSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQVENKQSLQLQSNGTKTGLESLCQYDSDED*

Homology

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BLAST of Chy10G173690 vs. ExPASy Swiss-Prot
Match: Q54WR5 (Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-38
Identity = 97/236 (41.10%), Postives = 142/236 (60.17%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLP--RVRRP-------------------------------- 60
           MGERKV++KYYPPDFDPSK+   +V+RP                                
Sbjct: 1   MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60

Query: 61  KNQQMKTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
           +  Q + YLGI+I+RF+ +C +C+AELTIKTDP+NS+YV ESGATRN+EPW+E DE    
Sbjct: 61  ETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEEKSN 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
              K   EE  D M +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    +  
Sbjct: 121 RMTKEQEEEQ-DAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSI----VQLLTNNDIASD 199
             +EK  +EED+ L+KSI  N +   + +I+D+   + +I    ++ + N+D   D
Sbjct: 181 ELEEKLQDEEDDLLVKSIFNNKNKLELNQINDNNSINNNIDSNKIKRIENDDDDGD 235

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BLAST of Chy10G173690 vs. ExPASy Swiss-Prot
Match: A8WHR3 (Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.3e-36
Identity = 100/275 (36.36%), Postives = 148/275 (53.82%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q                              
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  +K
Sbjct: 61  ETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQAEKLIEEEEKK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  + ML   +   
Sbjct: 121 IQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGMLGQYKELE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQLLTNNDIASDFKAKKQRV 238
             ++++ +EEDE   K ++     + V+R+ D +           + + A + K + ++ 
Sbjct: 181 QRQKQREQEEDEQETKEML---ERALVKRLRDSD-----------SEEEAENAKERSKKH 240

[Close]

BLAST of Chy10G173690 vs. ExPASy Swiss-Prot
Match: Q9BW85 (Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.5e-36
Identity = 83/192 (43.23%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q                              
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 159
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSE 180

[Close]

BLAST of Chy10G173690 vs. ExPASy Swiss-Prot
Match: Q9D6J3 (Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 87/217 (40.09%), Postives = 126/217 (58.06%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q                              
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                + YLG+ IFRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRMSQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 184
            + +++ EEEDE    +++      + R + D E +D
Sbjct: 181 EQWQQQQEEEDERETAALL--EEARHRRLLEDSESED 215

[Close]

BLAST of Chy10G173690 vs. ExPASy Swiss-Prot
Match: Q9P7C5 (Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf16 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 83/225 (36.89%), Postives = 116/225 (51.56%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQ------------------------------- 60
           M ERKVLNKY PPD+DPS  P  ++ K Q                               
Sbjct: 1   MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60

Query: 61  ----QMKT---YLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREE-- 120
               + KT   Y  I I RFY +CTRC+AE+T  TDP+++DY  ESGA+RN+EPW E+  
Sbjct: 61  FNARKEKTGEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKRL 120

Query: 121 DEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLV 178
            E  E E  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  + 
Sbjct: 121 QEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAIA 180

[Close]

BLAST of Chy10G173690 vs. ExPASy TrEMBL
Match: A0A6J1HNB0 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.8e-125
Identity = 250/329 (75.99%), Postives = 270/329 (82.07%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                             
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQ+TA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YVRRISDDEFDD +  VQ  T+ND   DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 294
           +SE  PHDPT+TSTKA  LH+  GEG DGNVGTS+ +KFVSKS PV VSI KKPE+TA+V
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

[Close]

BLAST of Chy10G173690 vs. ExPASy TrEMBL
Match: A0A6J1E6Q8 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.9e-124
Identity = 248/329 (75.38%), Postives = 269/329 (81.76%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                             
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQ+TA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +  VQ  TNND   DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 294
           +SE  PHDPT+TSTKA  L++  GEG DGNVGTS+ +KFVSKS PV VSI KKPE+TA+V
Sbjct: 241 ISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

[Close]

BLAST of Chy10G173690 vs. ExPASy TrEMBL
Match: A0A6J1EW00 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.7e-116
Identity = 235/329 (71.43%), Postives = 255/329 (77.51%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+VESGATRNFEPWREEDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKR+AEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQ+TA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YV+RISDD+FDD S   Q  TNND  S+  AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 294
           +SE SPHD  +T+TK   LHS  GEG DGN  TS D K +SKS  + VSI KKPE+T +V
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSGDAKLISKSLSIKVSIIKKPELTPRV 300

[Close]

BLAST of Chy10G173690 vs. ExPASy TrEMBL
Match: A0A6J1HYT1 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 235/329 (71.43%), Postives = 255/329 (77.51%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQ+FRFYFKCTRCSAELTIKTDPQNSDY+VESGATRNFEPWREEDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQ+TA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YVRRISDD+FD  S   Q  TNND  S+  AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDQFDGSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 294
           +SE SPHD  +T+ K   LHS  GEG DGN  TS+D KF+SKS  + VSI KKPE+T +V
Sbjct: 241 LSEESPHDDPTTTPKDVILHSLTGEGGDGNGATSSDAKFISKSLSIKVSIIKKPELTPRV 300

[Close]

BLAST of Chy10G173690 vs. ExPASy TrEMBL
Match: A0A6J1E3A4 (Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.2e-115
Identity = 240/328 (73.17%), Postives = 254/328 (77.44%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+K                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQ+TA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQLLTNNDIASDFKAKKQRV 240
           AEKEKKLEEEDEALIKSIVFNNS  YVRRI DDEFDDGS    +TNND  S   AKKQ+V
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSKDYVRRIPDDEFDDGS--HFVTNNDKTSGTSAKKQKV 240

Query: 241 SEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQVE 294
            E SPHDPTSTSTKA  L+S   EG D +VGTS D +FVSKS  + VSI KKPE+T  V+
Sbjct: 241 LEESPHDPTSTSTKAVILNSLTDEGNDSSVGTSDDARFVSKSLSIKVSIIKKPELTNPVD 300

[Close]

BLAST of Chy10G173690 vs. NCBI nr
Match: XP_004149128.1 (splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_018408 [Cucumis sativus])

HSP 1 Score: 541 bits (1395), Expect = 6.76e-193
Identity = 288/327 (88.07%), Postives = 291/327 (88.99%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQLLTNNDIASDFKAKKQRV 240
           AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQ LTNNDIASDFKAKKQRV
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQHLTNNDIASDFKAKKQRV 240

Query: 241 SEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQVE 293
           SEGSPHDPTSTS+KAGFLHSRMGEGEDGN+GTSTDTKFVSKSFPVIVSIKKKPEVTA+VE
Sbjct: 241 SEGSPHDPTSTSSKAGFLHSRMGEGEDGNIGTSTDTKFVSKSFPVIVSIKKKPEVTARVE 300

[Close]

BLAST of Chy10G173690 vs. NCBI nr
Match: XP_031745804.1 (LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus])

HSP 1 Score: 539 bits (1389), Expect = 5.54e-192
Identity = 287/327 (87.77%), Postives = 290/327 (88.69%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQIFRFYFKCTRCSAEL IKTDPQNSDYVVESGATRNFEPWREEDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELXIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQLLTNNDIASDFKAKKQRV 240
           AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQ LTNNDIASDFKAKKQRV
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGSIVQHLTNNDIASDFKAKKQRV 240

Query: 241 SEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQVE 293
           SEGSPHDPTSTS+KAGFLHSRMGEGEDGN+GTSTDTKFVSKSFPVIVSIKKKPEVTA+VE
Sbjct: 241 SEGSPHDPTSTSSKAGFLHSRMGEGEDGNIGTSTDTKFVSKSFPVIVSIKKKPEVTARVE 300

[Close]

BLAST of Chy10G173690 vs. NCBI nr
Match: XP_038895471.1 (splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [Benincasa hispida])

HSP 1 Score: 483 bits (1243), Expect = 9.91e-170
Identity = 262/328 (79.88%), Postives = 273/328 (83.23%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK                            
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEA EK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEAFEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHA VSIDSML+ALQRT 
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHANVSIDSMLMALQRTT 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN++VRRISD+EFDD S  VQ LTNN   SDFKAKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNFVRRISDEEFDDSSHFVQHLTNNVKTSDFKAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 293
           VSE SPHDPTSTS KA  L+S  GEG+DGNVGTS+D KFVSKS PVIVSIKKKPE+TA+V
Sbjct: 241 VSEESPHDPTSTSEKAVVLNSLTGEGKDGNVGTSSDAKFVSKSLPVIVSIKKKPELTARV 300

[Close]

BLAST of Chy10G173690 vs. NCBI nr
Match: KAG7015867.1 (Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461 bits (1185), Expect = 6.01e-161
Identity = 249/325 (76.62%), Postives = 269/325 (82.77%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                             
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  --TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEKEKHK 120
             TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEKEKHK
Sbjct: 61  EDTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEKEKHK 120

Query: 121 RNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTAAEKE 180
           RNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQ+TAAEKE
Sbjct: 121 RNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTAAEKE 180

Query: 181 KKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQRVSEG 240
           KKLEEEDEALIKSIVFN SN+YVRRISDDEFDD +  VQ  TNND   DF+AKKQ++SE 
Sbjct: 181 KKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQKISEE 240

Query: 241 SPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQVENKQ 293
            PHDPT+TSTKA  LH+  GEG DGNVGTS+ +KFVSKS PV VSI KKPE+TA+VENKQ
Sbjct: 241 FPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVENKQ 300

[Close]

BLAST of Chy10G173690 vs. NCBI nr
Match: XP_022965295.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_022965296.1 coiled-coil domain-containing protein 94 homolog [Cucurbita maxima])

HSP 1 Score: 460 bits (1183), Expect = 1.40e-160
Identity = 250/329 (75.99%), Postives = 270/329 (82.07%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM----------------------------- 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQM                             
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  -----KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                +TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQ+TA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDDGS-IVQLLTNNDIASDFKAKKQR 240
           AEKEKKLEEEDEALIKSIVFNNSN+YVRRISDDEFDD +  VQ  T+ND   DF+AKKQ+
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 VSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKPEVTAQV 293
           +SE  PHDPT+TSTKA  LH+  GEG DGNVGTS+ +KFVSKS PV VSI KKPE+TA+V
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

[Close]

BLAST of Chy10G173690 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 282.3 bits (721), Expect = 4.3e-76
Identity = 179/342 (52.34%), Postives = 216/342 (63.16%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+K                            
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA+RN+EPWR EDE  +K
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           +K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQRT 
Sbjct: 121 DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD-------GSIVQLLTNNDIASDF 240
           AEK K++EEEDEA+IKSI F      +RRI+D+E DD            L      +S  
Sbjct: 181 AEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKGSSSD 240

Query: 241 KAKKQRVSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVIVSIKKKP 294
            +KK++ +E SP +PT   T +   + +  + +         +K   KS  + V IKK+P
Sbjct: 241 LSKKRKATEVSPSNPTDILTSSSAENPKEPKKQ-------AISKQPFKSVHIKV-IKKQP 300

[Close]

BLAST of Chy10G173690 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-75
Identity = 179/349 (51.29%), Postives = 216/349 (61.89%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+K                            
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  -------------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWRE 120
                        TYLGIQIFRFYFKCT+CSAELT+KTDPQNSDY+VESGA+RN+EPWR 
Sbjct: 61  EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120

Query: 121 EDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
           EDE  +K+K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180

Query: 181 VALQRTAAEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD-------GSIVQLLTN 240
            ALQRT AEK K++EEEDEA+IKSI F      +RRI+D+E DD            L   
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKE 240

Query: 241 NDIASDFKAKKQRVSEGSPHDPTSTSTKAGFLHSRMGEGEDGNVGTSTDTKFVSKSFPVI 294
              +S   +KK++ +E SP +PT   T +   + +  + +         +K   KS  + 
Sbjct: 241 KKGSSSDLSKKRKATEVSPSNPTDILTSSSAENPKEPKKQ-------AISKQPFKSVHIK 300

[Close]

BLAST of Chy10G173690 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44
Identity = 106/217 (48.85%), Postives = 132/217 (60.83%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERK LNKYYPP+FDP ++PR+R+PKNQQ K                            
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLGI+I RFYFKC++C  EL +KTDP+NS YV ESGAT  ++   EE++    
Sbjct: 61  ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATCVYDQHEEEEQ---- 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
                 AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +  
Sbjct: 121 ------AEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 180

Query: 181 AEKEKKLEEEDEALIKSIVFNNSNSYVRRISDDEFDD 184
            E+E+  +EED ALIKS  F       RRI D+E D+
Sbjct: 181 KEEEEVAKEEDAALIKSTKFGKQ----RRIVDEETDE 203

[Close]

BLAST of Chy10G173690 vs. TAIR 10
Match: AT3G43250.1 (Family of unknown function (DUF572) )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 100/214 (46.73%), Postives = 128/214 (59.81%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMK---------------------------- 60
           MGERK LNKYYPPDFDP K+ R+++PKNQQ K                            
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  ------TYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120
                 TYLG++I RFY KCT+C AELTIKTDP+N  Y VESGA+  +     ED   EK
Sbjct: 61  EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLYN--GHEDIEEEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQRTA 180
           +K   NA      ++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L R  
Sbjct: 121 KKKHENA------LESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDLSRRK 180

[Close]

BLAST of Chy10G173690 vs. TAIR 10
Match: AT2G29430.1 (Family of unknown function (DUF572) )

HSP 1 Score: 58.9 bits (141), Expect = 7.8e-09
Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 32 KTYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEP 77
          +TYLGI+IFRF  +CT  S E+  +TDP+N+D+++ESGATR   P
Sbjct: 39 ETYLGIKIFRFQIQCTNGSHEMKFRTDPKNADFIIESGATRLLLP 83

The following BLAST results are available for this feature:

BLAST of Chy10G173690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WR5	1.2e-38	41.10	Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1	[more]
A8WHR3	4.3e-36	36.36	Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1	[more]
Q9BW85	9.5e-36	43.23	Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1	[more]
Q9D6J3	1.6e-35	40.09	Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1	[more]
Q9P7C5	1.2e-27	36.89	Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of Chy10G173690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNB0	1.8e-125	75.99	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1	[more]
A0A6J1E6Q8	1.9e-124	75.38	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1	[more]
A0A6J1EW00	9.7e-116	71.43	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1	[more]
A0A6J1HYT1	2.2e-115	71.43	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1	[more]
A0A6J1E3A4	2.2e-115	73.17	Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1	[more]

BLAST of Chy10G173690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149128.1	6.76e-193	88.07	splicing factor YJU2 [Cucumis sativus] >KGN50783.2 hypothetical protein Csa_0184...	[more]
XP_031745804.1	5.54e-192	87.77	LOW QUALITY PROTEIN: splicing factor YJU2-like [Cucumis sativus]	[more]
XP_038895471.1	9.91e-170	79.88	splicing factor YJU2 [Benincasa hispida] >XP_038895472.1 splicing factor YJU2 [B...	[more]
KAG7015867.1	6.01e-161	76.62	Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyro...	[more]
XP_022965295.1	1.40e-160	75.99	coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_02296529...	[more]

BLAST of Chy10G173690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17130.1	4.3e-76	52.34	Family of unknown function (DUF572)	[more]
AT1G17130.2	2.8e-75	51.29	Family of unknown function (DUF572)	[more]
AT2G32050.1	1.2e-44	48.85	Family of unknown function (DUF572)	[more]
AT3G43250.1	1.6e-38	46.73	Family of unknown function (DUF572)	[more]
AT2G29430.1	7.8e-09	55.56	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..241
None	No IPR available	PANTHER	PTHR12111:SF7	BNAA02G14200D PROTEIN	coord: 32..293 coord: 1..32
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 31..293 e-value: 1.4E-55 score: 189.2
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 32..293 coord: 1..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G173690.1	Chy10G173690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0046872	metal ion binding