Chy10G173130 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G173130
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	phytanoyl-CoA dioxygenase-like
Location	chrH10: 2868429 .. 2870141 (-)
RNA-Seq Expression	Chy10G173130
Synteny	Chy10G173130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTACCTTTCAATCCTTTTTCCATCATCTTCGCACTTCCAATTTCCATAATTTTGGCTTACCCAACTTCTTCTTCTTCTCCCCTCCTCCTCCTCCTCCTCCTCCTCTTTTCTCTACCTTTCTTGCAGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCGTGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGGTTTTTCTTTGATACCACATTTCTATCTGCTAACGTTATGCTCTGCTGATGTTGATGTATTCTTTTTCCGCGTTTCTTTTCGTTACCTCTACAGCAGCAGTCGACCGACGATTACTTCCTCCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGGTATCTGCAATTTCTACTTGCGTGTTATATTTCGATAATTTGGTTTCGACTTTTTTTTTTCTTTTTTTTCCTTCCCGTGTTGAGGAACATTAAATGTGGACATGATTTGGTCTTGGATGGGACTGTGCCTTCAACTATTCATTTCAGGCTAGGATTTAGCAACTCCAACTAAATGATCAATGTGTAAAACTTGTTCTGTTATTGTCGTGAAAATAAGAATTGAATATGCTATTGACATGTCTTTTAATACTTAGTTTTCATAAGTATGGTTCATGCCAATTGGCCCCCTTTTTTATTTCTACTCTTTTTTTTTTTTTTGCAGAAAAAGCATTTGGGGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGGTTTGTAGTTGTCTATTTTAGCAGACTGTTGACCTAATAGAAACTTTTGATCTGTCTTTTTTATCTATTTAGCATGGGTTTCAATTTGACCTTCGCTTACTTGGGTTTAACTATACTCCAAACTTTTGTTACTTTCTCTTGGCCTTGGTGACTCTCAAAATGGTTGTTCTCCATGCCTAGAAGCTTATGAAAACCTTAGAATGGAGCCTTTTCTTTTATGGTGCAAAATTGGTAACTTTTTTTTCTTTTAACTTCCCTTTTGCAGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCAATAGCCATTCAGTCTATGTACATATTTAAGGTTCTCTCTACATTGCAGTTTAACTTAACAATACTAGTTTATTAATTTATTCCATTAAGTTAATGATACAATAATGTTTGGAAAACTCACTGACAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCATTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAGTATCCCCTGAAAAGCCACTTCTTAGATAGTGGAAATGTCTTTCCTGGTGTCTGATTAATTATATTTCATGTTGATTTTTGTTGTATCTAGATGGACTTGTTAGAAGGTTTCTTACAGGCAACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTCATTCATGGAGATGTTATTCATCAAAG

mRNA sequence

ATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCGTGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGCAGTCGACCGACGATTACTTCCTCCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTGGGGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCAATAGCCATTCAGTCTATGTACATATTTAAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCATTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGGTTTCTTACAGGCAACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTCATTCATGGAGATGTTATTCATCAAAG

Coding sequence (CDS)

ATGGGAATTGTTCCTAATCTCACTTCGGATCAACTCCAATTCTTTCATTCTCACGGTTATCTTGTGATTGAATCATTCGCCACTCCTGATGAAATTCGTGCCATGAGAAACCGGATGGAACACTTGCTTCATGGATTTGACTGCTCCACTTCCTCTGTTTTCTCTACTGTTAATCAGCAGTCGACCGACGATTACTTCCTCCAAAGCGCTGAGAATATTTCCTTCTTTTTTGAGGAAAAAGCATTTGGGGAGGATGGAAACTTGAAACAAGAAAAGGAGCTCTCAATTAACAAAGTTGGTCATGCATTACATGAGTTTGACCCAGTTTTCAAAAGCTTCTCCGACTCTGAGAAGTTTTCAGGTTTATTGTTGTCATTGGGATACAAGAGGCCAATAGCCATTCAGTCTATGTACATATTTAAGCAACCAGGTATTGGAGGTGAAGTAGTGCCTCACCAGGATAACTCATTTCTTTACACTGAACCAACTACATGCACAGGGCTGTGGCTGGCACTTGAAGATGCAAATACGACAAATGGCTGTCTTTGGGCTATTCCTGGATCACATAAAAATGGACTTGTTAGAAGGTTTCTTACAGGCAACAAAGGAGTGTACTTTGATCAGCCTTCTCCTACTTACAACAAGAAAGATTTTGTGCCTATTGAAGTGAAAGCTGGATCTTTGGTTGTCATTCATGGAGATGTTATTCATCAAAG

Protein sequence

MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQX

Homology

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BLAST of Chy10G173130 vs. ExPASy Swiss-Prot
Match: Q9ZVF6 (Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2)

HSP 1 Score: 375.2 bits (962), Expect = 5.6e-103
Identity = 173/239 (72.38%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGI  +LT DQL FFHS GYLVIESFA+ DEIR +R RM+ LL+ FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            +TD+YF +SAE ISFFFEEKAFG+DG LKQ K+LSINKVGHALHE DP++K F+ S KF
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY+RP+ +QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRF+ G+ G+ FDQPSP+Y +KDFV IE+KAGSL+ IHGD+IHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQ 239

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BLAST of Chy10G173130 vs. ExPASy Swiss-Prot
Match: Q10E49 (Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708100 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 7.1e-90
Identity = 160/234 (68.38%), Postives = 188/234 (80.34%), Query Frame = 0


Query: 6   NLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTV-NQQSTDD 65
           +LT +QL+FF ++GYLV+ SF++ +E+RAMR+RM  L+ GFD     VFST  ++Q  +D
Sbjct: 6   SLTDEQLRFFDANGYLVLGSFSSAEEVRAMRDRMAELVDGFD-GAGDVFSTKDHRQVKND 65

Query: 66  YFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLL 125
           +F +SAENISFFFEEKAFG+DG LKQ KELSINKVGHALHE DPVFK FS     S L  
Sbjct: 66  FFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGANVSSLFS 125

Query: 126 SLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWA 185
           SL YKRP  IQSMYIFKQPGIGGEVVPHQDN+FLYT+P +CTGLWLALEDA  TNGCLWA
Sbjct: 126 SLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTDPPSCTGLWLALEDATKTNGCLWA 185

Query: 186 IPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           IPGSHKNGL RR +      +FD PSPTY+ K+FVP+EVK+G LVVIHGD+IHQ
Sbjct: 186 IPGSHKNGLKRRMIRDEIDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLIHQ 238

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BLAST of Chy10G173130 vs. ExPASy Swiss-Prot
Match: Q65WW7 (Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0473900 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-89
Identity = 159/234 (67.95%), Postives = 186/234 (79.49%), Query Frame = 0


Query: 6   NLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTV-NQQSTDD 65
           +LT  QL FF ++GYLV+ SF++ +E++AMR+RM  L+ GFD     VFST  ++Q  +D
Sbjct: 6   SLTDKQLHFFDANGYLVLGSFSSAEEVKAMRDRMAVLIDGFD-GAGDVFSTKDHRQVKND 65

Query: 66  YFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFSGLLL 125
           +F +SAENISFFFEEKAFG+DG LKQ KELSINKVGHALHE DPVFK FS  E  S L  
Sbjct: 66  FFFKSAENISFFFEEKAFGDDGCLKQAKELSINKVGHALHELDPVFKKFSFGENVSSLFS 125

Query: 126 SLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNGCLWA 185
           SL YKRP  IQSMYIFKQPGIGGEVVPHQDN+FLYT P +CTGLWLALEDA  TNGCLWA
Sbjct: 126 SLRYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTNPPSCTGLWLALEDATKTNGCLWA 185

Query: 186 IPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           IPGSHKNGL RR +      +FD PSPTY+ K+FVP+EVK+G LVVIHGD++HQ
Sbjct: 186 IPGSHKNGLKRRMIRDENDTHFDHPSPTYDLKEFVPLEVKSGDLVVIHGDLVHQ 238

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BLAST of Chy10G173130 vs. ExPASy Swiss-Prot
Match: Q5U3U0 (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio OX=7955 GN=phyhd1 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-55
Identity = 111/246 (45.12%), Postives = 145/246 (58.94%), Query Frame = 0


Query: 7   LTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFD----CSTSSVFST-----V 66
           LT   +Q F   GYLV+E   +P+E  A+R RM  ++   D    C T   FST     +
Sbjct: 4   LTDQDVQKFRDEGYLVLEGLLSPEECDALRRRMSEIIESMDVPEHCRTQ--FSTDHDEQL 63

Query: 67  NQQSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSE 126
             Q   DYF+ S + I FFFE+  F + G     KE S+NK+GHALH ++P+FK  + S 
Sbjct: 64  KTQGNADYFITSGDKIRFFFEKGVFDDKGEFVVPKEQSLNKIGHALHAYEPLFKRVTHSP 123

Query: 127 KFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           K   +   L    P+ +QSMYIFKQPGIGGEV PHQD +FLYT+P     G+W+ALEDA 
Sbjct: 124 KVQNICKKLELINPVILQSMYIFKQPGIGGEVTPHQDATFLYTQPLGRVMGVWVALEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFLTGNKGVY----FDQPSPTYNKKDFVPIEVKAGSLVVIH 239
             NGCLW IPGSH +G+ RR +   KG +    F      Y+ K FVP  VK G  V+IH
Sbjct: 184 QENGCLWFIPGSHNDGITRRMVRTPKGTFPLTDFIGREKDYDDKLFVPAPVKKGGAVLIH 243

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BLAST of Chy10G173130 vs. ExPASy Swiss-Prot
Match: Q9DB26 (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Phyhd1 PE=1 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-55
Identity = 115/246 (46.75%), Postives = 146/246 (59.35%), Query Frame = 0


Query: 7   LTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFD----CSTSSVFST-----V 66
           L+  QL+ F   G+L++E F T DE  AM+ R+  ++   D    C T   FST     +
Sbjct: 4   LSPSQLKKFQEDGFLLLEGFFTADECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQL 63

Query: 67  NQQSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSE 126
             Q   DYFL S + I FFFE+  F E GN     E SINK+GHALH  DPVF+S + S 
Sbjct: 64  QTQGKTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSP 123

Query: 127 KFSGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPT-TCTGLWLALEDAN 186
           K   L+ SLG + P+ +QSMYIFKQP  GGEV PHQD +FLYTEP     GLW+A+EDA 
Sbjct: 124 KVQALVRSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIAMEDAM 183

Query: 187 TTNGCLWAIPGSHKNGLVRRFL----TGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIH 239
             NGCLW IPGSH  G+ RR +        G  F    P +    FVP+ V+ G LV+IH
Sbjct: 184 LENGCLWFIPGSHTRGVSRRMIRAPSDSGPGTSFLGSDPAWASNLFVPLPVRRGGLVLIH 243

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BLAST of Chy10G173130 vs. ExPASy TrEMBL
Match: A0A0A0KPM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289600 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVN-Q 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEI AMRNRMEHLLHGFDCSTSSVFSTVN Q
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
           QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239

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BLAST of Chy10G173130 vs. ExPASy TrEMBL
Match: A0A1S4E537 (phytanoyl-CoA dioxygenase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129
Identity = 227/238 (95.38%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQ 
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQL 60

Query: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFS 120
           STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKFS
Sbjct: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKFS 120

Query: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180
           GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG
Sbjct: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180

Query: 181 CLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           CLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 CLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 238

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BLAST of Chy10G173130 vs. ExPASy TrEMBL
Match: A0A5D3CR94 (Phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001210 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.7e-129
Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 239

[Close]

BLAST of Chy10G173130 vs. ExPASy TrEMBL
Match: A0A1S4E5U1 (phytanoyl-CoA dioxygenase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.7e-129
Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 239

[Close]

BLAST of Chy10G173130 vs. ExPASy TrEMBL
Match: A0A1S3CNE4 (phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.7e-129
Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 239

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BLAST of Chy10G173130 vs. NCBI nr
Match: XP_011655109.1 (phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus])

HSP 1 Score: 487 bits (1254), Expect = 4.17e-173
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEI AMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFS 120
           STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFS
Sbjct: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFS 120

Query: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180
           GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG
Sbjct: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180

Query: 181 CLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238
           CLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 CLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238

[Close]

BLAST of Chy10G173130 vs. NCBI nr
Match: XP_031741398.1 (phytanoyl-CoA dioxygenase isoform X3 [Cucumis sativus])

HSP 1 Score: 483 bits (1242), Expect = 1.75e-171
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEI AMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239

[Close]

BLAST of Chy10G173130 vs. NCBI nr
Match: XP_011655108.1 (phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus] >KAE8648114.1 hypothetical protein Csa_004707 [Cucumis sativus])

HSP 1 Score: 483 bits (1242), Expect = 2.91e-171
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNLTSDQLQFFHSHGYLVIESFATPDEI AMRNRMEHLLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIHAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF
Sbjct: 61  QSTDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239

[Close]

BLAST of Chy10G173130 vs. NCBI nr
Match: XP_016903346.1 (PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis melo])

HSP 1 Score: 469 bits (1208), Expect = 5.12e-166
Identity = 227/238 (95.38%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQ 
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQL 60

Query: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKFS 120
           STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKFS
Sbjct: 61  STDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKFS 120

Query: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180
           GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG
Sbjct: 121 GLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTNG 180

Query: 181 CLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238
           CLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 CLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 238

[Close]

BLAST of Chy10G173130 vs. NCBI nr
Match: KAA0065706.1 (phytanoyl-CoA dioxygenase isoform X3 [Cucumis melo var. makuwa] >TYK14457.1 phytanoyl-CoA dioxygenase isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 468 bits (1203), Expect = 1.78e-165
Identity = 228/239 (95.40%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGIVPNL SDQLQFFHSHGYLVIESFATPDE+ AMRNRME LLHGFDCSTSSVFSTVNQQ
Sbjct: 1   MGIVPNLNSDQLQFFHSHGYLVIESFATPDEVHAMRNRMELLLHGFDCSTSSVFSTVNQQ 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            STDDYFLQSAENISFFFEEKAFGEDGNLKQ K+LSINKVGHALHE DPVFKSFSDSEKF
Sbjct: 61  LSTDDYFLQSAENISFFFEEKAFGEDGNLKQGKKLSINKVGHALHELDPVFKSFSDSEKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN
Sbjct: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 238
           GCLWAIPGSHKNGLVRRFL G+KGVYFDQPSPTY+KKDFVPIEVKAGSLVVIHGDVIHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFLRGDKGVYFDQPSPTYDKKDFVPIEVKAGSLVVIHGDVIHQ 239

[Close]

BLAST of Chy10G173130 vs. TAIR 10
Match: AT2G01490.1 (phytanoyl-CoA dioxygenase (PhyH) family protein )

HSP 1 Score: 375.2 bits (962), Expect = 4.0e-104
Identity = 173/239 (72.38%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MGIVPNLTSDQLQFFHSHGYLVIESFATPDEIRAMRNRMEHLLHGFDCSTSSVFSTVNQQ 60
           MGI  +LT DQL FFHS GYLVIESFA+ DEIR +R RM+ LL+ FDCS SS+FST NQ+
Sbjct: 1   MGITGSLTPDQLDFFHSQGYLVIESFASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQK 60

Query: 61  -STDDYFLQSAENISFFFEEKAFGEDGNLKQEKELSINKVGHALHEFDPVFKSFSDSEKF 120
            +TD+YF +SAE ISFFFEEKAFG+DG LKQ K+LSINKVGHALHE DP++K F+ S KF
Sbjct: 61  HTTDNYFFESAEKISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKF 120

Query: 121 SGLLLSLGYKRPIAIQSMYIFKQPGIGGEVVPHQDNSFLYTEPTTCTGLWLALEDANTTN 180
           S L  SLGY+RP+ +QSMYIFKQPGIGGEVVPHQDNSF+YT+P +CTGLW+ALED+   N
Sbjct: 121 SSLASSLGYRRPVVMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVN 180

Query: 181 GCLWAIPGSHKNGLVRRFLTGNKGVYFDQPSPTYNKKDFVPIEVKAGSLVVIHGDVIHQ 239
           GCLWAIPGSHKNGLVRRF+ G+ G+ FDQPSP+Y +KDFV IE+KAGSL+ IHGD+IHQ
Sbjct: 181 GCLWAIPGSHKNGLVRRFIRGDNGITFDQPSPSYEQKDFVSIEMKAGSLIAIHGDLIHQ 239

The following BLAST results are available for this feature:

BLAST of Chy10G173130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVF6	5.6e-103	72.38	Phytanoyl-CoA dioxygenase OS=Arabidopsis thaliana OX=3702 GN=PAHX PE=2 SV=2	[more]
Q10E49	7.1e-90	68.38	Phytanoyl-CoA dioxygenase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g070...	[more]
Q65WW7	1.6e-89	67.95	Phytanoyl-CoA dioxygenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g047...	[more]
Q5U3U0	7.5e-55	45.12	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio OX=7955 GN=...	[more]
Q9DB26	7.5e-55	46.75	Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus OX=10090 G...	[more]

BLAST of Chy10G173130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPM7	1.4e-133	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289600 PE=4 SV=1	[more]
A0A1S4E537	1.2e-129	95.38	phytanoyl-CoA dioxygenase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]
A0A5D3CR94	4.7e-129	95.40	Phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4E5U1	4.7e-129	95.40	phytanoyl-CoA dioxygenase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]
A0A1S3CNE4	4.7e-129	95.40	phytanoyl-CoA dioxygenase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502875 PE=...	[more]

BLAST of Chy10G173130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655109.1	4.17e-173	98.74	phytanoyl-CoA dioxygenase isoform X2 [Cucumis sativus]	[more]
XP_031741398.1	1.75e-171	98.33	phytanoyl-CoA dioxygenase isoform X3 [Cucumis sativus]	[more]
XP_011655108.1	2.91e-171	98.33	phytanoyl-CoA dioxygenase isoform X1 [Cucumis sativus] >KAE8648114.1 hypothetica...	[more]
XP_016903346.1	5.12e-166	95.38	PREDICTED: phytanoyl-CoA dioxygenase isoform X2 [Cucumis melo]	[more]
KAA0065706.1	1.78e-165	95.40	phytanoyl-CoA dioxygenase isoform X3 [Cucumis melo var. makuwa] >TYK14457.1 phyt...	[more]

BLAST of Chy10G173130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01490.1	4.0e-104	72.38	phytanoyl-CoA dioxygenase (PhyH) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008775	Phytanoyl-CoA dioxygenase	PFAM	PF05721	PhyH	coord: 15..238 e-value: 9.1E-57 score: 192.7
None	No IPR available	GENE3D	2.60.120.620	q2cbj1_9rhob like domain	coord: 5..238 e-value: 5.6E-89 score: 300.0
None	No IPR available	PANTHER	PTHR20883:SF15	PHYTANOYL-COA DIOXYGENASE DOMAIN-CONTAINING PROTEIN 1	coord: 6..238
None	No IPR available	PANTHER	PTHR20883	PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1	coord: 6..238
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 7..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G173130.1	Chy10G173130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051213	dioxygenase activity