CcUC11G216170 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G216170
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mitochondrial transcription termination factor family protein isoform 2
Location	CicolChr11: 9216036 .. 9223189 (-)
RNA-Seq Expression	CcUC11G216170
Synteny	CcUC11G216170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAGGAGCGTCCCGGTGAAGGCAAACCCAAAGATGGGTTATGTGGCTTTAGGCTGCAAGCAAAGGACAAGAAGATTGCTGTCTCATTTCTCAGTGTGAGCCAACCTGTGGTTGCGCATCTTCCTAATTCTCGCATTGGCTGACCCTTCTTCTTCAACCTCCGCTGCACAACCACAAGTCTATATGCTTTTCATCTTCAATCCCTCAAATCTCAGGTACTTCTTCCAATTTCATCTCTATACTCCATCTGCTGGAATCCTTGTTTTGTTTGTATAATACGAACCAGCTTCTCTCAATTAGACTTGTTAACTGCTTCTTTTTCGCATTCAGTTTTTCTCAAAAGAACCTTTTGGCTTGTGCTTCACACAAACGCGCACACACAATTCAATTCAATTAAGACAATATTCAGATATAAGCCCTTCTTTTTGAGGATGAATATGATCCACTTCCTTAGACGAGAAAGCCATTGGTTGAACTTTTTGCTGCATGATATAGTCTTAAAACGTAGTGTCTGCATTGTTTGGAAGATCGCGTCATGTCGTAAAGCAACTTCTTTCACTGGAGTATTTGCTATGAATTGGTGCCTTTACTCTGGCAGCTCCACCAACAAGATCTTGATCATGACTACCTTTTGACGACTGGCAGTGATGAGATAAACAATATGTTTGTATCAATTATCTCCTATTCTTGTGAACCTAATATGAAATTAGTCTGGTAGAAACAATAATAATAATCAAGCATAGCTCACAAACAATTTTAACGCGTAAAAACCTCCTTAAGTGAGGAGTAAAAAGCCATAGATTGAAGTCAAAATCTCCACTATAATTATTAATGGGCTAAAATGAGTTTTCCCTAGTCCAATGGATTAAGTCCGGCTCTTTGTTTGAATGACTCATGAATGTGATTGAACTCAATCCCAAAAGTCAATGACTGCATATCAAATGCCCTCTAAGAGGCTTCCGAGGATCTCAATCACTTTTGCTTCACTTTCCATGTACTTGTGTTTTCTTCCATGAATTCTTTTCAAAGCCCTATTGTGAGCATGGCCACCAGTCTTACCTGTGGAACTGAATTTGAAGAGATCCTAGTCAGCCACCTGTCTACATAGGGCCGTGGCTGCCTATTAATTTATAACATCATTGTTATTTTGGAAGTCAGAACATCACACTCTTGAATGATTTCACTATAGCCTTCAGTTAGCATATTTTTGTGGGAGCACCTATTGTTATATCTATTTTGCGGCATACTTGTAAGCTTTTAATTTTCGTTGGATCCGTTTTATATATCAGTACTTGTCCGATTGTCTTTTATTCGAACTTCCTATGACTTTCTTCTCCTGGACTCAGAACTTGGATAAAGTTGACAATCTTAATAGACTGAAACATGATTTTGCGTGGAAACTCGTCTACTAGCTCGTTGATCAACTTTTATTGGTGGTACGGCTATTTCGAAAATACTAATGTTGCGAGATAACTATAGGTTGGAAAGTCTATCTTTGATAGAATACATCTCTTCGTTGCATTAACTCGCTTGAAATCTTCTCCATATTTGAGTGGAACTCATTGTTGGTTCAAATAAAATAATGAATTGGAGGAATTTTCTGTGAGAGATGAGCCATGTTTTATGAACGTGGTACATGTGTTATATGGTAATCGCATTTTTTTAATTGGTATGGCTGGCTCTTACTAAACTTCTTAAATATGGTGCAAGGATGCTAGGAAAATCATTGGTGTCTCCCATATCAACCGTTGATTCTGCTACTCGTCTCTGTTGTTCTACTGTGAGTAATAGATTTTGCCTCATATCATGGAATACTATGTGAATAACACATCAGAGAAAAAAATTTTAGGTGCAAATAAATAAGTGAGGACAATTATTTATTGACATAAGGCTTTTGAGTAAGTTAAAAGTAAAGTCGTGGAGGCTTATGCTCAAAGTTGACAATAACATGCAATTGAGGAGATATGTGAATCTGTTGTCCTTATCAGAAAATTGTAGGAATGCAATGGGAAATAAGGAAATAAGTGTTATTCTCCTATTGTTTTGCATTGCTCAAACAATAATTTTATAAATTCTCTATTTAGGATTTTACAACTTATTCTTAATTCTCAATGCAGCGCTGCATTGCCACAGCCATATCAGATGCTGTATGTTCAAATGTGAGTTTCACCTATCATCCTGCTAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCAATCCCAGGAAGTGGGAAATCCGTTCAACTACTCAAGTTGAAAGCTTGACATTAAGTGACGAGGATAGGAAGACATGGGAAACTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAACAAGATAAGATGCTTGGAAAGGCATTCGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAATTCCTAATATTGAAATTGTAAATGAAATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTCAAAAAATTCCCAGAAGCTCTTGGCTGCAATCTTGAGCAGGAGCTGAAAACCAACGTACAATTATTGGACAAAGAGTGGGGAATTCAAGGTAAACCACTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAATGCACCAGATGCTGGGTTCGATTCTAGGTACATTTTCTTTTCAGAAATTCTTATGGAAATCATAATTCATATACATGAAACTACTACCTATTTAATTTCTTGCCAAATCATGTCCGAATTACGGTTTTCAGTTATTTGGATCATTGTTTTCATTTCATAAATGTGTAATCTGTTCTTCTCTCTGTCTCTCTAATTTGTATATTCTTTTAACATAAAATTACCGAAGTTCTATCAAGATGCCTTGAACTGTTGAGAGCATATTTGGAAATGGAAAGCCACCATCTTTGTTTCATTGACTTTTGCTTCCATCCTCATATGAAAAAGTAGTTTCCATAACTTCAAACATTTCCTAAGGAGTTAGTTTAGTGAAAGCAATTGTCCATTCTTGTAAACTAAAAAACAAACAAGTTTTTAAACTATAGTAGCTTATAACATATTATTATTATTTTATAAGAAACAATTTCATTGATGTATGAAATATATCCAATGGGGTAGAAAAGGGCCCCATTCAAAGGGTGTACAACGATTTGCAACAAGGAAATTTAAATTGTAATCTTAGGGGTTGTAAGTTTTTACACCAAAAGACGGCATTGTAAATAGCCAACTCTAAGACTTCTTTGGGAGATCTTTCACAATTGTTGAATACTTTGGCATTTATCGCATCCCAAAACTTGGACACGACCGCACGAATGATTCAAGACCATATGTTGTTGCTTTGAAAGGGTGATCCAATAGGGTCATTCTGAGCCAGCCAATAAAATCCCCTAGGGAATCCGTTGTCCAATTAAAAGAGTGGAACAGTTCAGCCCATATATTACCGCAAAAGGACAGTGGAAAAAAAGGTGAAATTGTGTTCCGTTACTTTTCCTTGCAGAGGCAGCACCATGGTGGGGAAAGAATAATTAAGACAAGAATGACTAACCTCCCACCATAGGAATTTGTTCTTTTCAGGGCAAGGGAGCTTCCATAACTTATTGTATAAGTCCTTTTGGGCAGAAGGTCCACAAGATGACAATTGGTTCATGAGGGACTTGGTGGAGAAAAAACCCATGCTTTCAAAAAATCCGGTTGGGCAGTAAGTTGGATGCTAGGGACGAAGTGTGTAGAACCAGCCCATTCGGTGATCTCATCATCTTTAAGAATGTTCTGAAGGTTAAGGCCCAAGATCCTGTCAATTGGTTCCAAACCTCTTCAATTGTGGCAGCTTTGGACCCGACAATGGCAGATGAGGGAAGCATTGTTTGAGGGGGGACAGAACAATCCATAAATCAGACCAAAAAGCCGTGGAGGAGCCATTACCAACTCTACGAAGGGTGTTGTTTTGTTTCATAATATGCTGCCAAGGACTGTTAGATGAAACGTTGCCGTTGTTGGATGGTTTTTTTTTTTAATCAAAATGACGAGATCTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGAGAAGGACAAGACCCAAATTTCGCTTGATAAAATTCCTCCAAAGTCTGAAGAGCCTCTTTTTCTTGATTAAAATGCCATTTAACCAAAAGGGATCTGTTTCAAAGTCTAATGTCGAAAATGTCAATCCCTCCCACATCTAATGATCGCTTGAGAATATCCCATATGAGGAGATGAGTGGTATTGTTGGTTCTTTTACCACTCCAAAGAATTGTTTTGAACCTCTTATCAATGATGTATGCCACCTTGGAAGGGAGTTGAAAGAGTGACTAGTAATAGATAGGCAAAGTTGATAGCGTAGCATTCAATTGCGTCAATTGGCCTCCTTCGGAAAGGAAATTGTGTGCCACGGTTATAGCCTCTTATCAATCCTGTCAAGAATGGGTTGCCGAAAGGATAGAGATGATGGCTTGCCATAAAGAGGTAATCCGAGATAAATAGAACCCCAAGATCCCACCTTACAATCATACTTAACAGCAATGTGATCAACCCACAAACTATAACATATTTTTACTGAAGTTGCGTTCTTGCAAGTGAAGTTGTTTTACGGAACAACTCACCAAACAAGTTATTCTTTCTAATTTTTGAGTAACTTCTAATTGATTTTGATATGAGCAGTAGCATAGTGCACAAAGTTTGTGTAGTAGATATAATATTCTTTATGCCCTTTGTGCCTTACTTTTTTTAATGGAAAAATAGTATTAGAATAATAATATTCCTTTTATGCATATGTTTAACAAAGATTCATATGAAATTATTTTGAAAGTACTCGATCAATTCCATGTATATGCACTTAGATTGTACAACTATGAACTTGAATTCTAATCCATCCAAAATTTCTGGAAAAGCAATGTCTTAATGACGTCTGAAATAGCATCTTCTTCTCTCCCTGTCTCTATATGGGCTTCTTAAATGCAATAATTAATAATTATTGGTTGTCTTTTTGCTCGTACACATACACAATGTATGTTTTCTCTTCAATAAAGGCATATTCTAAATCAAATTTCTTTACTTTTTAACAATTATTTGTAATATCATTCTCTTTTGCTTCATCATCATCTTGTTCTTTTCTTTCTTTCTTTTGCAGAGCTATAATGGGTCTCAATCTAAGGTTGAATATTCCCAAAAGATAGGTATGCTTTTGGTTTAATTTATTTTATTCGAATACTTTGTTAAAGAATATTCAAAAATATGTGTGAATATTAAAAAGACTGCGAAATAAAAATGGGAGTATAGATGCAGCAAGGCTTCAAGAGATCGAATATTTGCAATGAGAGCTAGCAAGATGGGCTGCAAAAGATGCCACTGTGTGCCACCAGAGCGTTGAGTTGAGTTATGAAGTTTGGAGTTAAGAAGTCTGTGTTCGAAGTGTAGAGTTATAAGATGTAGTTTTTCGATAAATGTGCGAAATAGAGAAAAATGGAGAGATGAAGTTCATCGATGAATGTTCAAACTTCAATAGTAAAAATACCGTTGAAATTGAGTTATTTAACATCAACTTATAGAGTTGGGTGGGCCAGGCACCTCCTAAAATATATTATCAATTAGAAAATAGGACATTATATAAAAAAATAAAAGTGATTTTTATTCCAATTGTAAGCAACACAATCCACTTATTATAGTACAACAAGGGTGGAAGAATCAACACAATCGGGGAAAAAGAAAACAATAGAGAAAATACAAAGCGAAATGCAAGAGAAACCCTTGGCCTCGATATATTGATAGGTAAATAATACCAATCCTATATAGATGACCTGGGAGAAAAACTCTTGCCAAATACAGTCGCCAGATTATCGTCACCAAAAAAAAGAAAAAACAAAAAAAAAAAAAACCAACCAAGCCTAATAGGCCAGGGGATTCATACCACAAACATTTTGATAAATAACACTTTTATATGCTAGTTGAGCTATGTTCGTTTTGACATTTTTATGTACATCAATAATATTTAAAATGTATAAACATACCAGAAAATTAAAGCAGCTCCAAAGATAAAAATGAAGATTAAGAAGGTTTTGAAAAGTAGAGCAATTGGAAATTAGGGGCATTTGGGCTTATTGCCATGGGTCTTGAGGCGAGCATAGCAAGGGCAAGCTTGGTGGTTGCCGTAAGTGCCGGGCGGAACGCAGTGGCAACGACTGCAGCAAGTTCCACAAGCACGCAAACATATCTTCTTTCTGAACACTTTACTACATCTCCTGGAACATTCCCTCTTGCAATCTAATCCAATCCAATCCATCCAATTGTACGTTAATTTCACTTCAAATTTTGTGTTATAAATTTCTTTATATATTAGAATTAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAGATATTGTTATGTTACCTATTTAGTTTTTATGGCTTTGTTTGGTAACAATTTTATTTTGAATTTTCTGGTTCTTAGATTTATGCTTGCTTTCTCTTATATTGCATACTATAATCTTCCGATTTCTTGAAGAAATAGGTGAATTTTTGGTCAATTTTTAGAATAGTTTTCATCTTTCTTGAGTAAAAGACTTGAATTTTTAGCCAAATTCCAAAAGCAAAAACAAAATTT

mRNA sequence

AAAAAGAAAAGGAGCGTCCCGGTGAAGGCAAACCCAAAGATGGGTTATGTGGCTTTAGGCTGCAAGCAAAGGACAAGAAGATTGCTGTCTCATTTCTCAGTGTGAGCCAACCTGTGGTTGCGCATCTTCCTAATTCTCGCATTGGCTGACCCTTCTTCTTCAACCTCCGCTGCACAACCACAAGTCTATATGCTTTTCATCTTCAATCCCTCAAATCTCAGGATGCTAGGAAAATCATTGGTGTCTCCCATATCAACCGTTGATTCTGCTACTCGTCTCTGTTGTTCTACTCGCTGCATTGCCACAGCCATATCAGATGCTGTATGTTCAAATGTGAGTTTCACCTATCATCCTGCTAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCAATCCCAGGAAGTGGGAAATCCGTTCAACTACTCAAGTTGAAAGCTTGACATTAAGTGACGAGGATAGGAAGACATGGGAAACTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAACAAGATAAGATGCTTGGAAAGGCATTCGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAATTCCTAATATTGAAATTGTAAATGAAATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTCAAAAAATTCCCAGAAGCTCTTGGCTGCAATCTTGAGCAGGAGCTGAAAACCAACGTACAATTATTGGACAAAGAGTGGGGAATTCAAGGTAAACCACTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAATGCACCAGATGCTGGGTTCGATTCTAGAGCTATAATGGGTCTCAATCTAAGGTTGAATATTCCCAAAAGATAGAAAATTAAAGCAGCTCCAAAGATAAAAATGAAGATTAAGAAGGTTTTGAAAAGTAGAGCAATTGGAAATTAGGGGCATTTGGGCTTATTGCCATGGGTCTTGAGGCGAGCATAGCAAGGGCAAGCTTGGTGGTTGCCGTAAGTGCCGGGCGGAACGCAGTGGCAACGACTGCAGCAAGTTCCACAAGCACGCAAACATATCTTCTTTCTGAACACTTTACTACATCTCCTGGAACATTCCCTCTTGCAATCTAATCCAATCCAATCCATCCAATTGTACGTTAATTTCACTTCAAATTTTGTGTTATAAATTTCTTTATATATTAGAATTAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAGATATTGTTATGTTACCTATTTAGTTTTTATGGCTTTGTTTGGTAACAATTTTATTTTGAATTTTCTGGTTCTTAGATTTATGCTTGCTTTCTCTTATATTGCATACTATAATCTTCCGATTTCTTGAAGAAATAGGTGAATTTTTGGTCAATTTTTAGAATAGTTTTCATCTTTCTTGAGTAAAAGACTTGAATTTTTAGCCAAATTCCAAAAGCAAAAACAAAATTT

Coding sequence (CDS)

ATGCTTTTCATCTTCAATCCCTCAAATCTCAGGATGCTAGGAAAATCATTGGTGTCTCCCATATCAACCGTTGATTCTGCTACTCGTCTCTGTTGTTCTACTCGCTGCATTGCCACAGCCATATCAGATGCTGTATGTTCAAATGTGAGTTTCACCTATCATCCTGCTAAGCATATGATAAAGGATGTGAGAAGACAAACTCCCAATCCCAGGAAGTGGGAAATCCGTTCAACTACTCAAGTTGAAAGCTTGACATTAAGTGACGAGGATAGGAAGACATGGGAAACTTGTCGGCAAGCTCTGTCTGTGTTCAGCTTCAGTGTTGAGGAACAAGATAAGATGCTTGGAAAGGCATTCGGCCACATTCATTCACCCTACTGGGGTGAAGACAGAAAGAAGGAAATTCCTAATATTGAAATTGTAAATGAAATACTGGAATATCTGAGGACACTTGGCCTTTCTAATGACGATCTTTCTAAGCTGCTCAAAAAATTCCCAGAAGCTCTTGGCTGCAATCTTGAGCAGGAGCTGAAAACCAACGTACAATTATTGGACAAAGAGTGGGGAATTCAAGGTAAACCACTAAGGAATCTTCTTCTGCGTAATCCCAAGGTATTGGGTTACAATGTTGATTGTAAAGGAGACTGCATCGCAAAATGCACCAGATGCTGGGTTCGATTCTAG

Protein sequence

MLFIFNPSNLRMLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPRKWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDRKKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQGKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF

Homology

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BLAST of CcUC11G216170 vs. NCBI nr
Match: XP_038885056.1 (uncharacterized protein LOC120075592 [Benincasa hispida] >XP_038885057.1 uncharacterized protein LOC120075592 [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-111
Identity = 200/216 (92.59%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSLVSPIST+DSATR CCSTR IATAISDA  SNVSF+YHPAKHMIKDVRRQTP P 
Sbjct: 1   MLGKSLVSPISTIDSATRFCCSTRSIATAISDAARSNVSFSYHPAKHMIKDVRRQTPYPS 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI STTQVESLTLSDEDRKTWE CRQALSVFSFSVEEQDKMLGKAF HIHSPYWGEDR
Sbjct: 61  KWEICSTTQVESLTLSDEDRKTWEACRQALSVFSFSVEEQDKMLGKAFSHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KKE+PNIE VN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 KKEVPNIETVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 216

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BLAST of CcUC11G216170 vs. NCBI nr
Match: XP_008441218.1 (PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441219.1 PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441220.1 PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo])

HSP 1 Score: 407.9 bits (1047), Expect = 5.7e-110
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSL SPIST+DSATR CCSTRC ATAISDAVCSNVSF+YHPAKH IK VRRQ P PR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWE+ S+TQVESL LSDED+KTWE CRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KK++PNIEIVN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

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BLAST of CcUC11G216170 vs. NCBI nr
Match: XP_004138649.1 (uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus] >XP_031737011.1 uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.5e-107
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSL SPIST+DSATR CCSTRC ATAISDAVCS+VSF+ H AKH IK VRRQ P PR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI S+TQVESL LSDED+KTWE CRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           +K++PNIEIVN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

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BLAST of CcUC11G216170 vs. NCBI nr
Match: XP_011649898.1 (uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_011649900.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_031737008.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_031737009.1 uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >KAE8652244.1 hypothetical protein Csa_021907 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.5e-107
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSL SPIST+DSATR CCSTRC ATAISDAVCS+VSF+ H AKH IK VRRQ P PR
Sbjct: 4   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 63

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI S+TQVESL LSDED+KTWE CRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 64  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 123

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           +K++PNIEIVN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 124 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 183

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 184 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 219

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BLAST of CcUC11G216170 vs. NCBI nr
Match: KAG6578327.1 (hypothetical protein SDJN03_22775, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSLVSPISTVDS TRLC ST CI TA S+AVCSNVSF+Y PAK+MI DVRRQ+P PR
Sbjct: 55  MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVCSNVSFSYQPAKYMIMDVRRQSPYPR 114

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI ST QVESL LSDED+KTWE CRQALS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 115 KWEIHSTAQVESLVLSDEDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 174

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KKE+PNI+ VNEILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLL+KEWGIQ
Sbjct: 175 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEKEWGIQ 234

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LR+LLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 235 GKSLRSLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 270

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BLAST of CcUC11G216170 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 22/76 (28.95%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 140 IVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQGKPLRNLL 199
           I+  ++EYL  LG+     ++L++K P  LG  L+  +K NVQ+L +++ ++   L +++
Sbjct: 286 IIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL-QDFNVRETSLPSII 345

Query: 200 LRNPKVLGYNVDCKGD 216
            + P+++G ++  K D
Sbjct: 346 AQYPEIIGIDLKPKLD 360

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BLAST of CcUC11G216170 vs. ExPASy TrEMBL
Match: A0A1S3B2X0 (uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSL SPIST+DSATR CCSTRC ATAISDAVCSNVSF+YHPAKH IK VRRQ P PR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSNVSFSYHPAKHTIKGVRRQNPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWE+ S+TQVESL LSDED+KTWE CRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEVCSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KK++PNIEIVN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 KKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

[Close]

BLAST of CcUC11G216170 vs. ExPASy TrEMBL
Match: A0A0A0LQN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.2e-107
Identity = 192/216 (88.89%), Postives = 201/216 (93.06%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSL SPIST+DSATR CCSTRC ATAISDAVCS+VSF+ H AKH IK VRRQ P PR
Sbjct: 1   MLGKSLASPISTIDSATRFCCSTRCTATAISDAVCSHVSFSCHSAKHTIKGVRRQNPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI S+TQVESL LSDED+KTWE CRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEICSSTQVESLILSDEDKKTWEACRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           +K++PNIEIVN+ILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLLDKEWGIQ
Sbjct: 121 EKKVPNIEIVNDILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGY VDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYYVDCKGDCIAKCTRCWVRF 216

[Close]

BLAST of CcUC11G216170 vs. ExPASy TrEMBL
Match: A0A6J1JTP6 (uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-106
Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSLVSPISTVDS TRLC ST CI TA S AVCSNVSF+Y PAK+MI DVRRQ+P PR
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSGAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI ST+QVESL LSD+D+KTWE CRQALS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEIHSTSQVESLVLSDDDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KKE+PNI+ VNEILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLL+KEWGIQ
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 216

[Close]

BLAST of CcUC11G216170 vs. ExPASy TrEMBL
Match: A0A6J1FK31 (uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC111444935 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-106
Identity = 190/216 (87.96%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGKSLVSPISTVDS TRLC ST CI TA S+AVCSNVSF+Y PAK+MI DVRRQ+P PR
Sbjct: 1   MLGKSLVSPISTVDSVTRLCFSTPCIGTAKSEAVCSNVSFSYQPAKYMIMDVRRQSPYPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI ST QVESL LSDED+KTWE CRQALS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEIHSTAQVESLVLSDEDKKTWEACRQALSMFSFSDEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KKE+PNI+ VNEILEYLRTLGLSNDDLSKLLKKFPE LGCNLEQELKTNVQLL+KEWGIQ
Sbjct: 121 KKEVPNIDTVNEILEYLRTLGLSNDDLSKLLKKFPEVLGCNLEQELKTNVQLLEKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LR+LLLRNPKVLGYNVDCKGDCIAKCTRCWVRF
Sbjct: 181 GKSLRSLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 216

[Close]

BLAST of CcUC11G216170 vs. ExPASy TrEMBL
Match: A0A6J1DF32 (uncharacterized protein LOC111020227 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020227 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.3e-99
Identity = 178/216 (82.41%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 12  MLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPNPR 71
           MLGK+LVSPISTVDSATR C ST    TA  D  CSNVSF+  P K++ KD RR +P PR
Sbjct: 1   MLGKALVSPISTVDSATRFCFSTPGFVTAKPDGACSNVSFSNRPWKNVTKDARRHSPCPR 60

Query: 72  KWEIRSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWGEDR 131
           KWEI ST QVESL LSDED+KTWE CRQALS+FSFS EEQDKMLGKAFGHIHSPYWGEDR
Sbjct: 61  KWEIHSTAQVESLILSDEDKKTWEACRQALSMFSFSAEEQDKMLGKAFGHIHSPYWGEDR 120

Query: 132 KKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQ 191
           KKE+P IEIVN+ILEYLRTLGLS+DDL KLLKKFPE LGCNLEQELKTN+QLLDKEWGIQ
Sbjct: 121 KKEVPKIEIVNDILEYLRTLGLSDDDLCKLLKKFPEVLGCNLEQELKTNIQLLDKEWGIQ 180

Query: 192 GKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GK LRNLLLRNPKVLGYNVDCKGDC+AKCTRCWVRF
Sbjct: 181 GKSLRNLLLRNPKVLGYNVDCKGDCMAKCTRCWVRF 216

[Close]

BLAST of CcUC11G216170 vs. TAIR 10
Match: AT4G09620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-64
Identity = 122/219 (55.71%), Postives = 162/219 (73.97%), Query Frame = 0


Query: 10  LRMLGKSLVSPISTVDSATRLCCSTRCIATAISDAVCSNVSFTYHPAKHMIKDVRRQTPN 69
           + M+G SL SP++T+ SA     S   + T  ++ +   ++ +YH        VR  + +
Sbjct: 1   MEMVGNSLASPLATLGSAKCFRHSAVDLVT-YTNVLPLRLNSSYHGVN---GGVRTSSYS 60

Query: 70  PRKWEI-RSTTQVESLTLSDEDRKTWETCRQALSVFSFSVEEQDKMLGKAFGHIHSPYWG 129
             KW +  STTQVE+   S+ED   WE C++ALS F FSVEE+DK+LGKAFGHIHSPYW 
Sbjct: 61  RSKWIVFCSTTQVET---SNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWT 120

Query: 130 EDRKKEIPNIEIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEW 189
           E+R KE P +E +N+ILE+LR+LGLS++DL K++KKFPE LGC+LE+E+K N+ +L+ +W
Sbjct: 121 EERVKENPKVETLNQILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQW 180

Query: 190 GIQGKPLRNLLLRNPKVLGYNVDCKGDCIAKCTRCWVRF 228
           GI GK LRNLLLRNPKVLGYNVDCKGDC+A+CTRCWVRF
Sbjct: 181 GITGKQLRNLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF 212

[Close]

BLAST of CcUC11G216170 vs. TAIR 10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-05
Identity = 22/76 (28.95%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 140 IVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDKEWGIQGKPLRNLL 199
           I+  ++EYL  LG+     ++L++K P  LG  L+  +K NVQ+L +++ ++   L +++
Sbjct: 286 IIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL-QDFNVRETSLPSII 345

Query: 200 LRNPKVLGYNVDCKGD 216
            + P+++G ++  K D
Sbjct: 346 AQYPEIIGIDLKPKLD 360

[Close]

BLAST of CcUC11G216170 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 139 EIVNEILEYLRTLGLSNDDLSKLLKKFPEALGCNLEQELKTNVQLLDK-EWGIQGKPLRN 198
           +I+N I  +L  LG S D+ S L+K+FP+ +G + E   K    L+ K  W     PL+ 
Sbjct: 291 KILNTIETFL-GLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNW-----PLK- 350

Query: 199 LLLRNPKVLGYNVD 212
            L+ NP VLGY+++
Sbjct: 351 ALVSNPAVLGYSLE 357

The following BLAST results are available for this feature:

BLAST of CcUC11G216170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885056.1	3.9e-111	92.59	uncharacterized protein LOC120075592 [Benincasa hispida] >XP_038885057.1 unchara...	[more]
XP_008441218.1	5.7e-110	90.28	PREDICTED: uncharacterized protein LOC103485418 [Cucumis melo] >XP_008441219.1 P...	[more]
XP_004138649.1	4.5e-107	88.89	uncharacterized protein LOC101218603 isoform X2 [Cucumis sativus] >XP_031737011....	[more]
XP_011649898.1	4.5e-107	88.89	uncharacterized protein LOC101218603 isoform X1 [Cucumis sativus] >XP_011649900....	[more]
KAG6578327.1	1.1e-105	87.96	hypothetical protein SDJN03_22775, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC11G216170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT96	2.0e-04	28.95	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CcUC11G216170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2X0	2.7e-110	90.28	uncharacterized protein LOC103485418 OS=Cucumis melo OX=3656 GN=LOC103485418 PE=...	[more]
A0A0A0LQN8	2.2e-107	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402090 PE=3 SV=1	[more]
A0A6J1JTP6	5.4e-106	87.96	uncharacterized protein LOC111489650 OS=Cucurbita maxima OX=3661 GN=LOC111489650...	[more]
A0A6J1FK31	5.4e-106	87.96	uncharacterized protein LOC111444935 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1DF32	8.3e-99	82.41	uncharacterized protein LOC111020227 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC11G216170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09620.1	2.9e-64	55.71	Mitochondrial transcription termination factor family protein	[more]
AT4G02990.1	1.4e-05	28.95	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	3.4e-04	37.84	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 145..210 e-value: 3.1E-8 score: 32.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 10..226
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 133..222 e-value: 2.9E-15 score: 58.1
None	No IPR available	PANTHER	PTHR13068:SF192	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 10..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G216170.1	CcUC11G216170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0042646	plastid nucleoid
molecular_function	GO:0003690	double-stranded DNA binding