CcUC11G213230 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G213230
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Transcription initiation factor TFIID subunit 8
Location	CicolChr11: 5230034 .. 5231167 (+)
RNA-Seq Expression	CcUC11G213230
Synteny	CcUC11G213230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGATGGAGGTGGGGAGAGTGGAAAAGTTCATGAACGACCGAGGACAAGAAAGAATTTGGGTAGTGAAGATTTCCCACGGGCGCTTGCGAAGATTGCTGTAGCCCAAATATGTGAGAGTGAGGGGTTTCAAACTTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACGTTGCAGTTCGGTATGTTCAAAACATGGGAAAGACAGCAAACTTTTGTGCTAACTTTGCTGGCAGAACAGAGTGTAATTTGTTTGATATAATTCAAGCACTGGAAGATTTGGGGTCGGTTCAAGGGTTTGCAGGTGCATCGGATATTGAACATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTTGTTATGTATCTCAAGCGGAAGAAATCCCATTTGTCTACTCAGTTCCCAAATTTCCAGTTATCAAAGAGCGAAAATTGAGGCCTACTTTTTTGCAAATTGGGGAAGAACCTCCTGGAGAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGAAGCATACATTGAGTCCCCCACTGTGAAGGAGGAAGTAGTGGAGCCTCCAACAATTAAAACTGAGCCAGAAAAACAATGTAGAAGTGCTGAAAAATCCTTCTGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCAAAGAGAAGACCCTAGAAATGCAGCTATGACCAAACAAATACAAGAAAGTAACCCATTTCTTGCTCCCCCCTTGCAATTTGGTGAGAAGCAAGTTTCTTCTATCGTTGTTCCAGATAAGGTCTTGAACAATTCAAGTACAGAATATCCTGTTCCTGTCATGGAGAACTGTCATGTGGATACACATGTCTCAGTGCTGGAGACTTTTGCTCCTGCTATTGAATCGATAAAGAACAATTTGTACGATTCTGAGGAAAAGTTCTCTCTGAACAGGAGATCTACTGTACAGTTTAAGATTGGGACTGGAAAGAAACCGGTAGGTAGCGCGATGGGATTGAGGGCGCTAAATAATGGTGTGAAGAAGTCTTCGTCCTGGTTTGTAGGGGAAGATGAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGGACTCAATGGAGAACGCCAAGGAGCTATCTCAGTTTTAA

mRNA sequence

ATGAGCGATGGAGGTGGGGAGAGTGGAAAAGTTCATGAACGACCGAGGACAAGAAAGAATTTGGGTAGTGAAGATTTCCCACGGGCGCTTGCGAAGATTGCTGTAGCCCAAATATGTGAGAGTGAGGGGTTTCAAACTTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACGTTGCAGTTCGGTATGTTCAAAACATGGGAAAGACAGCAAACTTTTGTGCTAACTTTGCTGGCAGAACAGAGTGTAATTTGTTTGATATAATTCAAGCACTGGAAGATTTGGGGTCGGTTCAAGGGTTTGCAGGTGCATCGGATATTGAACATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTTGTTATGTATCTCAAGCGGAAGAAATCCCATTTGTCTACTCAGTTCCCAAATTTCCAGTTATCAAAGAGCGAAAATTGAGGCCTACTTTTTTGCAAATTGGGGAAGAACCTCCTGGAGAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGAAGCATACATTGAGTCCCCCACTGTGAAGGAGGAAGTAGTGGAGCCTCCAACAATTAAAACTGAGCCAGAAAAACAATGTAGAAGTGCTGAAAAATCCTTCTGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCAAAGAGAAGACCCTAGAAATGCAGCTATGACCAAACAAATACAAGAAAGTAACCCATTTCTTGCTCCCCCCTTGCAATTTGGTGAGAAGCAAGTTTCTTCTATCGTTGTTCCAGATAAGGTCTTGAACAATTCAAGTACAGAATATCCTGTTCCTGTCATGGAGAACTGTCATGTGGATACACATGTCTCAGTGCTGGAGACTTTTGCTCCTGCTATTGAATCGATAAAGAACAATTTGTACGATTCTGAGGAAAAGTTCTCTCTGAACAGGAGATCTACTGTACAGTTTAAGATTGGGACTGGAAAGAAACCGGTAGGTAGCGCGATGGGATTGAGGGCGCTAAATAATGGTGTGAAGAAGTCTTCGTCCTGGTTTGTAGGGGAAGATGAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGGACTCAATGGAGAACGCCAAGGAGCTATCTCAGTTTTAA

Coding sequence (CDS)

ATGAGCGATGGAGGTGGGGAGAGTGGAAAAGTTCATGAACGACCGAGGACAAGAAAGAATTTGGGTAGTGAAGATTTCCCACGGGCGCTTGCGAAGATTGCTGTAGCCCAAATATGTGAGAGTGAGGGGTTTCAAACTTTTCAGCAGTCTGCCCTTGAAACACTGGCTGACGTTGCAGTTCGGTATGTTCAAAACATGGGAAAGACAGCAAACTTTTGTGCTAACTTTGCTGGCAGAACAGAGTGTAATTTGTTTGATATAATTCAAGCACTGGAAGATTTGGGGTCGGTTCAAGGGTTTGCAGGTGCATCGGATATTGAACATTGTCTCGCAAGTTCCAGCACAGTTAAAGAGATTGCTTGTTATGTATCTCAAGCGGAAGAAATCCCATTTGTCTACTCAGTTCCCAAATTTCCAGTTATCAAAGAGCGAAAATTGAGGCCTACTTTTTTGCAAATTGGGGAAGAACCTCCTGGAGAGCATATACCTTCTTGGTTGCCTGCACTCCCTGATCCCGAAGCATACATTGAGTCCCCCACTGTGAAGGAGGAAGTAGTGGAGCCTCCAACAATTAAAACTGAGCCAGAAAAACAATGTAGAAGTGCTGAAAAATCCTTCTGGAATCTGCAGCAGTGGTTGTTTTGCAATGGATTGGAAGGATCCCAAAGAGAAGACCCTAGAAATGCAGCTATGACCAAACAAATACAAGAAAGTAACCCATTTCTTGCTCCCCCCTTGCAATTTGGTGAGAAGCAAGTTTCTTCTATCGTTGTTCCAGATAAGGTCTTGAACAATTCAAGTACAGAATATCCTGTTCCTGTCATGGAGAACTGTCATGTGGATACACATGTCTCAGTGCTGGAGACTTTTGCTCCTGCTATTGAATCGATAAAGAACAATTTGTACGATTCTGAGGAAAAGTTCTCTCTGAACAGGAGATCTACTGTACAGTTTAAGATTGGGACTGGAAAGAAACCGGTAGGTAGCGCGATGGGATTGAGGGCGCTAAATAATGGTGTGAAGAAGTCTTCGTCCTGGTTTGTAGGGGAAGATGAGAAGGATGACAAGAAAAGAAAGGCCGAGAAGATTCTGAAGGACTCAATGGAGAACGCCAAGGAGCTATCTCAGTTTTAA

Protein sequence

MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPFLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNNLYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKAEKILKDSMENAKELSQF

Homology

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BLAST of CcUC11G213230 vs. NCBI nr
Match: XP_031742212.1 (transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN52513.1 hypothetical protein Csa_008154 [Cucumis sativus])

HSP 1 Score: 680.6 bits (1755), Expect = 7.5e-192
Identity = 343/375 (91.47%), Postives = 357/375 (95.20%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKE A
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEE+PF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPEKQCR+ EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCRT-EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+PDKVLNNSSTEY VPVMENC VDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  G+ + LRALNNGVKKSSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 374

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BLAST of CcUC11G213230 vs. NCBI nr
Match: XP_038889606.1 (transcription initiation factor TFIID subunit 8-like [Benincasa hispida])

HSP 1 Score: 679.9 bits (1753), Expect = 1.3e-191
Identity = 343/376 (91.22%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGE GKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALE LADVAV
Sbjct: 1   MSDGGGEIGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALEALADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASD+EHCLASSSTVKEI 
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDVEHCLASSSTVKEII 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF YSVPKFPV+KERKLRPTFLQIGEEPPGEHIPSWLPALPDPE Y E PT
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEIYTEFPT 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIK EPEKQCRSAEKSFWNL+Q LFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKNEPEKQCRSAEKSFWNLKQLLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAP LQFGEK++S IV+P+K LNNSSTEYPVPVMENC VDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPALQFGEKEISPIVLPEKALNNSSTEYPVPVMENCLVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
           LYDSEEKFSLNRRSTVQFKIGTGKK VGS +  RALNNGVKKSSSWFVGE+EKDDKKRKA
Sbjct: 301 LYDSEEKFSLNRRSTVQFKIGTGKKLVGSTIESRALNNGVKKSSSWFVGEEEKDDKKRKA 360

Query: 361 EKILKDSMENAKELSQ 377
           EKILKDSMEN+ ELSQ
Sbjct: 361 EKILKDSMENSNELSQ 376

[Close]

BLAST of CcUC11G213230 vs. NCBI nr
Match: KAA0039434.1 (transcription initiation factor TFIID subunit 8 [Cucumis melo var. makuwa] >TYK00623.1 transcription initiation factor TFIID subunit 8 [Cucumis melo var. makuwa])

HSP 1 Score: 679.1 bits (1751), Expect = 2.2e-191
Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGF GASDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFVGASDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPE QCRS+EKSF NLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+P+KVLNNSSTEY VPVMENCHVDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  GS + L ALNNGVKKSSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 375

[Close]

BLAST of CcUC11G213230 vs. NCBI nr
Match: XP_008459385.1 (PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis melo])

HSP 1 Score: 678.7 bits (1750), Expect = 2.9e-191
Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPE QCRS+EKSF NLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+P+KVLNNSSTEY VPVMENCHVDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  GS + L ALNNGVK SSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKNSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 375

[Close]

BLAST of CcUC11G213230 vs. NCBI nr
Match: XP_023538136.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 658.3 bits (1697), Expect = 4.0e-185
Identity = 324/376 (86.17%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           M+DGGGESGKVHERP+TRKNLG EDFP+ALAKIAVAQICESEGFQTFQQSALETLAD+AV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQN+GKTANFCANFAGRTECN+FDIIQALEDLGS+QGFAGA DIEHCLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSIQGFAGALDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF Y+VPKFPV+KERKLRPTFLQIGEE PG+HIPSWLPALPDPE YI SPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           V+E+VVEP  IKTEPEKQC+SAEKS WNLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSS+V+PD++LNNSST+YPVP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTQYPVPARENCLVDTHVSVLETFAPAIESMKNS 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
           L+DSEEKFSLNRRSTVQFKIGTGKKPV S + L+ALNNGVK SSSWFVG+D+KDDKKRKA
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKA 360

Query: 361 EKILKDSMENAKELSQ 377
           EKILK+S+EN+ EL Q
Sbjct: 361 EKILKNSIENSNELYQ 376

[Close]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.7e-50
Identity = 134/364 (36.81%), Postives = 199/364 (54.67%), Query Frame = 0


Query: 23  SEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTEC 82
           S +F  A AK AVAQ+CES G++ F+  ALE+L+  A++Y+  +GKTA   AN  GR++C
Sbjct: 23  SYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQC 82

Query: 83  NLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVI- 142
           N+FDII AL+DL    G  G S     L  S  ++EI  +V+ +EE+PF   +P FPV  
Sbjct: 83  NVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAI 142

Query: 143 --KERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQC 202
             + RK+ P+F++IGE PPG+HIP WLPA PDP  Y E+P   E V +P   K E  +Q 
Sbjct: 143 SDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQR 202

Query: 203 RSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPF------LAPPLQFGEKQV 262
           R AE++  +LQ+ L C                  +I   NP       +   ++  E ++
Sbjct: 203 RKAERALLSLQRKLVC------------------KISSRNPVWGDMDGVKEEMRDDESEL 262

Query: 263 SSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNNLYDSEEKFSLNRR 322
            S+   +KV             E+ + D  +SV+E FAPA+E+ ++  + SE      + 
Sbjct: 263 RSVSSGEKV-------------ESLNRD-GLSVIEAFAPAMEAARDG-FSSEAHTEWKKN 322

Query: 323 STVQF-KIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKAEKILKDSMENAK 377
             V   K+ T KK +G  + L     G  +  S FV E+++DDK+R+AE IL+  MEN  
Sbjct: 323 KPVALSKLRTEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPV 352

[Close]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot
Match: Q5VWG9 (Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 51/170 (30.00%), Postives = 82/170 (48.24%), Query Frame = 0


Query: 24  EDFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECN 83
           E + R+L +++VAQIC++ G+ + Q SA   L DV  RY+Q +G+  +  +   GRT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 84  LFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKE 143
           L D+ +A + +G                   ++ E+  Y+   E + F + +P FPV K 
Sbjct: 63  LDDVGEAFQLMG------------------VSLHELEDYIHNIEPVTFPHQIPSFPVSKN 122

Query: 144 RKLRPTFLQIGE---EPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPT 191
             L+  F Q G    E   E+IP +LP        I S   +EE  + PT
Sbjct: 123 NVLQ--FPQPGSKDAEERKEYIPDYLPP-------IVSSQEEEEEEQVPT 145

[Close]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot
Match: Q5HZG4 (Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3 PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.2e-10
Identity = 50/170 (29.41%), Postives = 81/170 (47.65%), Query Frame = 0


Query: 24  EDFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECN 83
           E + R+L +++VAQIC++ G+ + Q SA   L DV  RY+Q +G+  +  +   GRT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 84  LFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKE 143
           L D+ +A + +G                    + E+  Y+   E + F + +P FPV K 
Sbjct: 63  LDDVGEAFQLMG------------------VNLHELEDYIHNIEPVTFPHQIPSFPVSKN 122

Query: 144 RKLRPTFLQIGE---EPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPT 191
             L+  F Q G    E   ++IP +LP        I S   +EE  + PT
Sbjct: 123 NVLQ--FPQPGSKDAEERKDYIPDYLPP-------IVSSQEEEEEEQVPT 145

[Close]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 42/179 (23.46%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 28  RALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNLFDI 87
           R   ++ V+ +    GF++ +++++ETL ++   Y+  +G++A        RT+  L DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 88  IQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKERKLR 147
           +  L ++G                    V  +  Y  +++ +     V   P +  + + 
Sbjct: 94  VVTLVEMG------------------FNVDTLPAYAKRSQRM-----VITAPPVTNQPVT 153

Query: 148 PTFLQIGE-EPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQCRSAEKS 206
           P  L  G+  P   HIPS  P  PDP  YI++PT +E V +   ++ +   Q R  E++
Sbjct: 154 PKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA 189

[Close]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 42/179 (23.46%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 28  RALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNLFDI 87
           R   ++ V+ +    GF++ +++++ETL ++   Y+  +G++A        RT+  L DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 88  IQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKERKLR 147
           +  L ++G                    V  +  Y  +++ +     V   P +  + + 
Sbjct: 94  VVTLVEMG------------------FNVDTLPAYAKRSQRM-----VITAPPVTNQPVT 153

Query: 148 PTFLQIGE-EPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQCRSAEKS 206
           P  L  G+  P   HIPS  P  PDP  YI++PT +E V +   ++ +   Q R  E++
Sbjct: 154 PKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA 189

[Close]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL
Match: A0A0A0KSJ1 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_5G639490 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.6e-192
Identity = 343/375 (91.47%), Postives = 357/375 (95.20%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKE A
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEE+PF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPEKQCR+ EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCRT-EKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+PDKVLNNSSTEY VPVMENC VDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  G+ + LRALNNGVKKSSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 374

[Close]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL
Match: A0A5D3BLI6 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002430 PE=3 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGF GASDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFVGASDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPE QCRS+EKSF NLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+P+KVLNNSSTEY VPVMENCHVDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  GS + L ALNNGVKKSSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKKSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 375

[Close]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL
Match: A0A1S3CA13 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103498533 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.4e-191
Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           MSDGGGESGKVHERP+TRKNLGSEDFPRALAKIAVAQICESEGFQ FQQSALETLADVAV
Sbjct: 1   MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQNMG TANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA
Sbjct: 61  RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF YSVPKFPV+KERKLRP+FLQIGEEPPGEHIPSWLPALPDPE YIESP 
Sbjct: 121 RYVAQAEEIPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           VKEEVVEP TIKTEPE QCRS+EKSF NLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP
Sbjct: 181 VKEEVVEPQTIKTEPEIQCRSSEKSFRNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSSIV+P+KVLNNSSTEY VPVMENCHVDTHVSVLETFAPAIESIKNN
Sbjct: 241 FLAPPLQFGEKEVSSIVLPNKVLNNSSTEYHVPVMENCHVDTHVSVLETFAPAIESIKNN 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
            + SEEK+SLNR+STVQFKIGTGKK  GS + L ALNNGVK SSSWFVGEDEKDDKKRKA
Sbjct: 301 FHMSEEKYSLNRKSTVQFKIGTGKKAAGSMIELTALNNGVKNSSSWFVGEDEKDDKKRKA 360

Query: 361 EKILKDSMENAKELS 376
           EKILKDSMEN+ ELS
Sbjct: 361 EKILKDSMENSNELS 375

[Close]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL
Match: A0A6J1JHK2 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111487069 PE=3 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 8.1e-184
Identity = 323/376 (85.90%), Postives = 353/376 (93.88%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           M+DGGGESGKVHERP+TRKNLG EDFP+ALAKIA+AQICESEGFQTFQQSALETLAD+AV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAIAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQN+GKTANFCANFAGRTECN+FDIIQALEDLGSVQGFAGA DIEHCLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDIIQALEDLGSVQGFAGALDIEHCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF Y+VPKFPV+KERKLRPTFLQIGEE PG+HIPSWLPALPDPE YI SPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQIGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           V+E+VVEP  IKTEPEKQC+ AEKS WNLQQ LFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKGAEKSLWNLQQGLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSS+V+PD++LNNSSTEYPVP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESMKNS 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
           L+DSEEKFSLNRRSTVQFKIGTGKKPV S + L+ALNNGVK SSSWFVG+D+KDDKKRKA
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPVSSMIELKALNNGVKNSSSWFVGDDKKDDKKRKA 360

Query: 361 EKILKDSMENAKELSQ 377
           EKILK+S+EN+ EL Q
Sbjct: 361 EKILKNSIENSNELYQ 376

[Close]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL
Match: A0A6J1E0M7 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111429744 PE=3 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 1.1e-183
Identity = 322/376 (85.64%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLGSEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAV 60
           M+DGGGESGKVHERP+TRKNLG EDFP+ALAKIAVAQICESEGFQTFQQSALETLAD+AV
Sbjct: 1   MNDGGGESGKVHERPKTRKNLGGEDFPQALAKIAVAQICESEGFQTFQQSALETLADIAV 60

Query: 61  RYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIA 120
           RYVQN+GKTANFCANFAGRTECN+FD+IQALEDLGSVQGFAGA DIE CLASSSTVKEIA
Sbjct: 61  RYVQNIGKTANFCANFAGRTECNVFDVIQALEDLGSVQGFAGALDIERCLASSSTVKEIA 120

Query: 121 CYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPT 180
            YV+QAEEIPF Y+VPKFPV+KERKLRPTFLQ GEE PG+HIPSWLPALPDPE YI SPT
Sbjct: 121 RYVAQAEEIPFAYAVPKFPVVKERKLRPTFLQTGEETPGKHIPSWLPALPDPETYIASPT 180

Query: 181 VKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 240
           V+E+VVEP  IKTEPEKQC+SAEKS WNLQQWLFCNGLEGS+RE PRNAAMTKQ QESNP
Sbjct: 181 VEEKVVEPQKIKTEPEKQCKSAEKSLWNLQQWLFCNGLEGSRREGPRNAAMTKQTQESNP 240

Query: 241 FLAPPLQFGEKQVSSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNN 300
           FLAPPLQFGEK+VSS+V+PD++LNNSSTEYPVP  ENC VDTHVSVLETFAPAIES+KN+
Sbjct: 241 FLAPPLQFGEKEVSSVVLPDRILNNSSTEYPVPARENCLVDTHVSVLETFAPAIESLKNS 300

Query: 301 LYDSEEKFSLNRRSTVQFKIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKA 360
           L+DSEEKFSLNRRSTVQFKIGTGKKP  S + L+ALNNGVK SSSWFVG+D+KDDKKRKA
Sbjct: 301 LHDSEEKFSLNRRSTVQFKIGTGKKPESSMIELKALNNGVKNSSSWFVGDDKKDDKKRKA 360

Query: 361 EKILKDSMENAKELSQ 377
           EKILK+S+EN+ EL Q
Sbjct: 361 EKILKNSIENSNELYQ 376

[Close]

BLAST of CcUC11G213230 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-56
Identity = 148/387 (38.24%), Postives = 210/387 (54.26%), Query Frame = 0


Query: 1   MSDGGGESGKVHERPRTRKNLG-SEDFPRALAKIAVAQICES-------------EG--F 60
           M +GGGE G      + ++++    DF  ALA++A AQICES             EG  F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGAS 120
            +FQ++ALETL DV ++Y+QN+GKTA F  N AGR E N  DI+QALEDLGS  GF GA 
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 DIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPS 180
           D+EHCLA S  VK+I  Y  +AEEIPFVYS+P+FP  + ++  P+F  IG EPP EHIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQRE 240
           WLPA P+ +    S  +  +       K E + Q R    S  ++QQ +  + L+  +  
Sbjct: 181 WLPAFPETKMSNGSEEINVD-------KIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 240

Query: 241 DPRNAAMTKQIQESNPFLAPPLQFGEKQV--SSIVVPDKVLNN--SSTEYPVPVMENCHV 300
           D ++     +  E NPFLA P+  GEK V  S +V P ++     S+   P   M   H 
Sbjct: 241 DQKDVQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSH- 300

Query: 301 DTHVSVLETFAPAIE-SIKNNLYDSEEKFSLNRRST----VQFKIGTGKKPVGSAMGLRA 360
             H+  LE +A + + + KN L   E++   +   T    ++FKIGT K     A     
Sbjct: 301 --HIPALEAYALSDKINDKNRLAGMEDEQKRDGARTQGALLRFKIGTRK-----ASECWK 360

Query: 361 LNNGVKKSSSWFVGEDEKDDKKRKAEK 363
           +N  +++   WF  +  K +KK + E+
Sbjct: 361 INQCLEE-KGWFKEDGNKREKKVEREE 371

[Close]

BLAST of CcUC11G213230 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 215.7 bits (548), Expect = 6.4e-56
Identity = 151/385 (39.22%), Postives = 204/385 (52.99%), Query Frame = 0


Query: 1   MSDGGGESG-KVHERPRTRKNLGSEDFPRALAKIAVAQICES------------EG--FQ 60
           M++G GE G +  E    RK     DF  ++A++AVAQICES            EG  F 
Sbjct: 17  MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76

Query: 61  TFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASD 120
           +FQ+SAL+TL DVAV+Y+Q++GKTA+  AN AGR + N  DI+QALEDLGS  GFAG SD
Sbjct: 77  SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136

Query: 121 IEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVIKERKLRPTFLQIGEEPPGEHIPSW 180
            +HCLA S  VK+I  Y  +AEEIPFVYS+P+FP  KE+K  P+F ++G EPP EHIP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196

Query: 181 LPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQCRSAEKSFWNLQQWLFCNGLEGSQRED 240
           LPA P+ E    S       +E      E      S + SF          G     +  
Sbjct: 197 LPAFPETELCDRSEETNAATIEGEIPSKENGSSLPSMQLSFDG-------GGRLEIHKSS 256

Query: 241 PRNAAMTKQIQESNPFLAPPLQFGEKQVSSIVVPDKVLNN--SSTEYPVPVMENCHVDTH 300
                 T+ + E N FL  PL+F EK VS +V P ++ N    +   P   + N H   H
Sbjct: 257 KDVGESTEAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNH---H 316

Query: 301 VSVLETFAPAIESIKNN---LYDSEEKFSLNRR--STVQFKIGTGKKPVGSAMGLRALNN 360
           + +LE  AP+ +    N   +    EK  + R+  + V+FKIGT K+ +  A       N
Sbjct: 317 IPILEASAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKRSMCLA------KN 376

Query: 361 GVKKSSSWFVGEDEKDDKKRKAEKI 364
              +   WF    E +DK+ K  +I
Sbjct: 377 RSFQEEGWF---QEGEDKREKTSEI 382

[Close]

BLAST of CcUC11G213230 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 199.5 bits (506), Expect = 4.7e-51
Identity = 134/364 (36.81%), Postives = 199/364 (54.67%), Query Frame = 0


Query: 23  SEDFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTEC 82
           S +F  A AK AVAQ+CES G++ F+  ALE+L+  A++Y+  +GKTA   AN  GR++C
Sbjct: 23  SYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQC 82

Query: 83  NLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEIACYVSQAEEIPFVYSVPKFPVI- 142
           N+FDII AL+DL    G  G S     L  S  ++EI  +V+ +EE+PF   +P FPV  
Sbjct: 83  NVFDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAI 142

Query: 143 --KERKLRPTFLQIGEEPPGEHIPSWLPALPDPEAYIESPTVKEEVVEPPTIKTEPEKQC 202
             + RK+ P+F++IGE PPG+HIP WLPA PDP  Y E+P   E V +P   K E  +Q 
Sbjct: 143 SDRSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQR 202

Query: 203 RSAEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNPF------LAPPLQFGEKQV 262
           R AE++  +LQ+ L C                  +I   NP       +   ++  E ++
Sbjct: 203 RKAERALLSLQRKLVC------------------KISSRNPVWGDMDGVKEEMRDDESEL 262

Query: 263 SSIVVPDKVLNNSSTEYPVPVMENCHVDTHVSVLETFAPAIESIKNNLYDSEEKFSLNRR 322
            S+   +KV             E+ + D  +SV+E FAPA+E+ ++  + SE      + 
Sbjct: 263 RSVSSGEKV-------------ESLNRD-GLSVIEAFAPAMEAARDG-FSSEAHTEWKKN 322

Query: 323 STVQF-KIGTGKKPVGSAMGLRALNNGVKKSSSWFVGEDEKDDKKRKAEKILKDSMENAK 377
             V   K+ T KK +G  + L     G  +  S FV E+++DDK+R+AE IL+  MEN  
Sbjct: 323 KPVALSKLRTEKKFLGQPLDLSLQMKGEDRPIS-FVREEDRDDKRRRAEFILRQCMENPV 352

[Close]

BLAST of CcUC11G213230 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 86.3 bits (212), Expect = 5.9e-17
Identity = 55/159 (34.59%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 25  DFPRALAKIAVAQICESEGFQTFQQSALETLADVAVRYVQNMGKTANFCANFAGRTECNL 84
           +F  +L KIAV+QIC+S G++    SAL TL     +++Q++ + A+  +N A RTE NL
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 85  FDIIQALED--LGSVQGFAGAS---DIE-HCLASSSTVKEIACYVSQAEEIPFVYSVPKF 144
           FDI+  L+D  L +   F G S   DIE  CL  S+ ++ ++ +V+ A EIPF   +P+ 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPR- 144

Query: 145 PVIKERKLRPTF------LQIGEEPPGEHIPSWLPALPD 172
                R+   +F      + +        +P+WLP  PD
Sbjct: 145 -----RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPD 177

The following BLAST results are available for this feature:

BLAST of CcUC11G213230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742212.1	7.5e-192	91.47	transcription initiation factor TFIID subunit 8 [Cucumis sativus] >KGN52513.1 hy...	[more]
XP_038889606.1	1.3e-191	91.22	transcription initiation factor TFIID subunit 8-like [Benincasa hispida]	[more]
KAA0039434.1	2.2e-191	91.47	transcription initiation factor TFIID subunit 8 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_008459385.1	2.9e-191	91.47	PREDICTED: transcription initiation factor TFIID subunit 8 [Cucumis melo]	[more]
XP_023538136.1	4.0e-185	86.17	transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of CcUC11G213230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	6.7e-50	36.81	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5VWG9	1.8e-10	30.00	Transcription initiation factor TFIID subunit 3 OS=Homo sapiens OX=9606 GN=TAF3 ...	[more]
Q5HZG4	5.2e-10	29.41	Transcription initiation factor TFIID subunit 3 OS=Mus musculus OX=10090 GN=Taf3...	[more]
A7MAZ4	1.2e-09	23.46	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	1.2e-09	23.46	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]

BLAST of CcUC11G213230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSJ1	3.6e-192	91.47	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A5D3BLI6	1.1e-191	91.47	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CA13	1.4e-191	91.47	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JHK2	8.1e-184	85.90	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E0M7	1.1e-183	85.64	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CcUC11G213230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15570.1	3.7e-56	38.24	Bromodomain transcription factor	[more]
AT3G02160.1	6.4e-56	39.22	Bromodomain transcription factor	[more]
AT4G34340.1	4.7e-51	36.81	TBP-associated factor 8	[more]
AT1G31240.1	5.9e-17	34.59	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	SMART	SM00576	17neu3	coord: 24..100 e-value: 2.8E-29 score: 113.3
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 27..95 e-value: 1.2E-21 score: 76.5
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 161..209 e-value: 1.4E-7 score: 32.0
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 160..211 e-value: 1.00796E-10 score: 54.5863
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 22..106 e-value: 4.5E-23 score: 82.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 30..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR46338:SF7	BROMODOMAIN TRANSCRIPTION FACTOR	coord: 1..376
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..376

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G213230.1	CcUC11G213230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity