CcUC11G211740 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G211740
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionAnaphase-promoting complex
LocationCicolChr11: 3756637 .. 3758848 (+)
RNA-Seq ExpressionCcUC11G211740
SyntenyCcUC11G211740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCTCCGGCGCCTGCGAAACCGGCAAAATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCACCGCCCTAGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTCTCCTCCATAACCTCAATCGCAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCTTGATATCATCCATTCCATATACTTCTCAAATCTCCGATTAGTTGCCCTACTGAACGGCAACCATGGGGGATTTGTCCAATTCTATAACGGCGTTTCCCACTGTGTGATCTCTCTGAAGTCCAGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGAGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAGTAAGTGAACTTCTTGTTGGTAATGTAGTAAGCATACCTTTCTTGATTTATTTTATGATGGACATGAGGTTCCTGTAGAATATACTGGACGGATTGAAAGCATTTAGTTTTGAGTTGTATCATCAGATTGTTCTCTACTTGTTATTAATGGCATTAGATAGAAACATAACCAAATTTTTCAGGGAAAAGGAAAACTCAAGCAATTGTGCCTTACTAACAGAAATTCCCAGTTTGAAGATGAAACTAAATTCGTAACCTAATGACTTCTTGTTGGAGGATGAACTTATAATCAAATACTAAACAAATCCCAGATCAAATAATGACAAAAGAAAGAGCTAAGAAACTAGTTCTTAAGATCTTGTTCATGTGATACATTTTGGTTGGTCATTTCTTCCCACTTTTTCCTATATGTGTTATTGTACAAGTGTAACGTTCATCTGTATTCCATTGATCTCAAATACTCAACTGTAACCTTAAGTTTATTGACTAAACTCCATTTCTTTACTGATTTCATATGATAAAATGGCTACTGTAGTCTTGTTGATAGACTGAAATTTAGAAGCTTCTCTGCCTTGGTTTGTGTATGAACTGAGTTGACCTTGAAATTCACCAGTCAAGTTATGATATTAGTTAGAAAGACAGCTAGCAAGCAAGTCGAGTAAGACAACTATTATTAAGTTGAGCGAGTTTTTGCTAGTACTAATCAAAGACAAACTTAAAGTCCAAATTCTCATAAAGTTGATAGGCACTTATCTATCGTGGATCTCTGTAGTCTTCCTTACAACCGCTACCAATTCTTAAACAGAAAGTTGTACGATTGCGAAGACCGTTTCTGATCGAGAATGGAATTCATCCCGTGAAACATCGTCTCATTATCACCAATAGTTATTTCGTTGAACACTTCTATTTAAATTTGCTTAAAGTCTGTTTCTACATGGGACCAATCCACCCTAATTAAGTTGTGATGTCACAATCTCATAATACTATGTTTGTTGCTCAACTTGGCTAAGTTGGGAAATTTTGCGAATCCAAAGTAAGTCACATGGGAAGTCTCTGTTCATTTCATCCAATCTTAGCAAAACTGGTTTAAGGTTGGATCATTCCTTATCTAGGTGATTTTTGGAAAATTCAAGCGGAAAGGAAGCATTTGAAAGCATCTTTGGTTTGATGACTAAAGATAACACCGATGGACTAGAAGCATTAATAACATAGTGGAATTGTTTAGGTCTCATCTAATAACAATTTCGTTTTAGTTTTTCATCTTCCCTAAGGAAAGACTTATTTTTTCGGGTAAATTTATAAAAATAAAAACTACTTTTGAACCATCCAAAACTTACCTTGGATACTTGCTAAACAAAATTAAACATTAAACTAGACTTAAACTACGAAGTGTGAGAGGCAACTTCAAGGCACCTTTTTGTGCATTGCTCATTTTCCTTTAGATATTGTGCAATTGTTCTTGACACTTTTGATTGGTTCTTGACTTTGTCTAACAATATTTATGATATTTTTCCTCCATTTTTTTGGATATTTCAAGGTGTGAAGAAGAAGGTTTTGTGGCCTACTCTAAACAGGGTTTTCTTCAGGTTTCTATGGGCGAGAGGAATGGAAGAATTTTCAGGGACTCTTTCTCTACTTTCTGTAGTTTTATAGATTTTGTTCTCTTTCATGATATGTAAATACCTTTTCTAGATCGTAGTCTTTCTTCTTTGATTTCAAACTGGAGACCGTTCTTATTATTCACCATGTTGGGAGTTCTTACTCAGTTCATGTCATTCAT

mRNA sequence

ATTTCTCCGGCGCCTGCGAAACCGGCAAAATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCACCGCCCTAGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTCTCCTCCATAACCTCAATCGCAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGAGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAGTGTGAAGAAGAAGGTTTTGTGGCCTACTCTAAACAGGGTTTTCTTCAGTCTTTCTTCTTTGATTTCAAACTGGAGACCGTTCTTATTATTCACCATGTTGGGAGTTCTTACTCAGTTCATGTCATTCAT

Coding sequence (CDS)

ATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCACCGCCCTAGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTCTCCTCCATAACCTCAATCGCAATAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGAGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAGTGTGAAGAAGAAGGTTTTGTGGCCTACTCTAAACAGGGTTTTCTTCAGTCTTTCTTCTTTGATTTCAAACTGGAGACCGTTCTTATTATTCACCATGTTGGGAGTTCTTACTCAGTTCATGTCATTCAT

Protein sequence

MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDASDRRRLLKSRGRLLLILRSFDRRSFHSEECEEEGFVAYSKQGFLQSFFFDFKLETVLIIHHVGSSYSVHVIH
Homology
[Close]
BLAST of CcUC11G211740 vs. NCBI nr
Match: KAG6586369.1 (Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-10
Identity = 47/67 (70.15%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATA------STDTTST-NSSLLHNLNRNKDPA 60
          MLRRQP+KI+VKIEDKEELEQ R+R A A A      +TDTTS+  +SLLHNLNRNKDP 
Sbjct: 1  MLRRQPSKIEVKIEDKEELEQARKRAAAAAAAAAASTTTDTTSSAAASLLHNLNRNKDPT 60

[Close]
BLAST of CcUC11G211740 vs. NCBI nr
Match: KGN60724.1 (hypothetical protein Csa_019232 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-10
Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTNSSLLHNLNRNKDPASKAQRLD 60
          MLRRQPT IDV+IEDKEELEQLR+R A A       ST SSLLHNL+RNKDPASKAQRL 
Sbjct: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAA-------STYSSLLHNLSRNKDPASKAQRLG 55

Query: 61 AS 63
           S
Sbjct: 61 IS 55

[Close]
BLAST of CcUC11G211740 vs. NCBI nr
Match: OVA19190.1 (Anaphase-promoting complex [Macleaya cordata])

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-07
Identity = 36/65 (55.38%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTN---SSLLHNLNRNKDPASKAQ 60
          MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++L+H L+RNKDP++K Q
Sbjct: 1  MLRRKPSKIEVKIEDKEELEEARKRSIASSAATTTTTTTTRAAALIHQLDRNKDPSNKPQ 60

Query: 61 RLDAS 63
          R+  S
Sbjct: 61 RIGLS 65

[Close]
BLAST of CcUC11G211740 vs. NCBI nr
Match: PNX80228.1 (hypothetical protein L195_g036225 [Trifolium pratense])

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-07
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTNSSLLHNLNRNKDPASKAQRLD 60
          MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +SLL   +R +DP+SKA R+ 
Sbjct: 1  MLRRKPTKIQVKIEDKEELEEARRRNAAATNTTTTTTGAASLLRQFDRAEDPSSKANRIG 60

Query: 61 AS 63
           S
Sbjct: 61 LS 62

[Close]
BLAST of CcUC11G211740 vs. NCBI nr
Match: KAG5564275.1 (hypothetical protein RHGRI_000468 [Rhododendron griersonianum])

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-06
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTN---SSLLHNLNR-NKDPASKA 60
          MLRR+P+KI+VK+EDKEELE+ R+R+A A A+T TTS+    +SLLH+ +R +KDP+SK+
Sbjct: 1  MLRRKPSKIEVKVEDKEELEEARKRSAAAAATTSTTSSTTGAASLLHHFDRSSKDPSSKS 60

Query: 61 QRLDAS 63
           R+  S
Sbjct: 61 HRIGLS 66

[Close]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match: A0A0A0LFB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALA-----TASTDTTSTNSSLLHNLNRNKDPASK 60
          MLRRQP+KI+VKIEDKEELEQ R+R A A     T +TD TS   SLLHN+NRNKD ASK
Sbjct: 1  MLRRQPSKIEVKIEDKEELEQARKRAAAAASTTTTTTTDATSAAGSLLHNINRNKDQASK 60

Query: 61 AQRLDAS 63
          AQRL  S
Sbjct: 61 AQRLGIS 67

[Close]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match: A0A0A0LI59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 46/62 (74.19%), Postives = 49/62 (79.03%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTNSSLLHNLNRNKDPASKAQRLD 60
          MLRRQPT IDV+IEDKEELEQLR+R A A       ST SSLLHNL+RNKDPASKAQRL 
Sbjct: 1  MLRRQPTMIDVEIEDKEELEQLRKRPAAA-------STYSSLLHNLSRNKDPASKAQRLG 55

Query: 61 AS 63
           S
Sbjct: 61 IS 55

[Close]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match: A0A200R928 (Anaphase-promoting complex OS=Macleaya cordata OX=56857 GN=BVC80_8407g9 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.2e-08
Identity = 36/65 (55.38%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTN---SSLLHNLNRNKDPASKAQ 60
          MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++L+H L+RNKDP++K Q
Sbjct: 1  MLRRKPSKIEVKIEDKEELEEARKRSIASSAATTTTTTTTRAAALIHQLDRNKDPSNKPQ 60

Query: 61 RLDAS 63
          R+  S
Sbjct: 61 RIGLS 65

[Close]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match: A0A2K3LNW2 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036225 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTSTNSSLLHNLNRNKDPASKAQRLD 60
          MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +SLL   +R +DP+SKA R+ 
Sbjct: 1  MLRRKPTKIQVKIEDKEELEEARRRNAAATNTTTTTTGAASLLRQFDRAEDPSSKANRIG 60

Query: 61 AS 63
           S
Sbjct: 61 LS 62

[Close]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match: A0A371EQJ7 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_52824 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.7e-07
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0 

Query: 1  MLRRQPTKIDVKIEDKEELEQLRQRTALATASTDTTST---NSSLLHNLNRNKDPASKAQ 60
          MLRR+P+KI+VKIEDKEELE+ R+R A A  +T TT+T    S+LL  L+R +DP+SKA 
Sbjct: 1  MLRRKPSKIEVKIEDKEELEEARRRNASAATTTTTTTTTTGTSALLRQLDRGEDPSSKAH 60

Query: 61 RLDAS 63
          R+  S
Sbjct: 61 RIGLS 65

The following BLAST results are available for this feature:
BLAST of CcUC11G211740 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6586369.11.0e-1070.15Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. soro... [more]
KGN60724.12.3e-1074.19hypothetical protein Csa_019232 [Cucumis sativus][more]
OVA19190.11.1e-0755.38Anaphase-promoting complex [Macleaya cordata][more]
PNX80228.13.1e-0759.68hypothetical protein L195_g036225 [Trifolium pratense][more]
KAG5564275.11.2e-0656.06hypothetical protein RHGRI_000468 [Rhododendron griersonianum][more]
BLAST of CcUC11G211740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFB12.9e-1168.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1[more]
A0A0A0LI591.1e-1074.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1[more]
A0A200R9285.2e-0855.38Anaphase-promoting complex OS=Macleaya cordata OX=56857 GN=BVC80_8407g9 PE=4 SV=... [more]
A0A2K3LNW21.5e-0759.68Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036225 PE=4 SV=1[more]
A0A371EQJ75.7e-0756.92Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_52824 P... [more]
BLAST of CcUC11G211740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018860Anaphase-promoting complex, subunit CDC26PFAMPF10471ANAPC_CDC26coord: 1..58
e-value: 1.3E-6
score: 29.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G211740.1CcUC11G211740.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031145 anaphase-promoting complex-dependent catabolic process
biological_process GO:0030071 regulation of mitotic metaphase/anaphase transition
cellular_component GO:0005680 anaphase-promoting complex