CcUC11G211220 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G211220
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Dynein light chain
Location	CicolChr11: 3205080 .. 3206987 (-)
RNA-Seq Expression	CcUC11G211220
Synteny	CcUC11G211220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTCTAACCAAGCAAATGAAAGGATTCAAATCCTTTTACAAGTCTCGCGATGGAGGTCGGAATGTACCAACTCGTGAACTTGTTTCTATGAGTTCAATGAATAAGACATCAATTTACAAGTATAACTGGTTGGGTAGGAAATCTAAAAAAGCAACTGATCAACACGACGACGGTGGCGGTGGTGGCGGCAGCAGTGAGGAAATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAGTCAGTTTCTCATGTAGAAACAAATTTGGGATCAGTGGCTGCATTTCTTCAAGTGAAAGTTTTGGTATCAGACATGCCTGAGATTATGCAAATTCAAGCTTTTAGGACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTCAGCTCAAAACATATGGCTTACAATATTAAAAAGGTATTTGTATTTATCAATTATATATTGTTCCATTGGCAAGTTTTTGTTTAGTGGTTGCTTCTCTATGTGTTTTTGGTGTGTATCATTTCTCTTTTCCTTCGTTCATCTCAATTTGAAATCGACAAGTAAAGAAAGCGAGAAAATGCTACAATGAGATCTACATGGTTTACCACCAGTATGTTAGCTACGGTCATAAATGGAGGGAGAAAATAGGGTTTTATTAGAGAGAATATTAGATAATACAGATTGTTGATGCGCCAGTAGGGTTAGAGAGTTTATGTATAGTGAACTTCTCTAAACTCTAGTGCCAAACTCGTAAATAACATATATCCATTAATGGAGTTTGATCACAAAACAAAAAACTTTGGTAAAATTCTCACTTTTTCCTTTCACTGGGAAGTTCATATTGATCTGTTCATATTGATCTGTTTTTTTTTTTTTTTTTTTCNTCTGGTACTAAATCTGTTCATTATATAATTAAAAAAAAAAAAAAGGTTTTGAGACAGAATTCAAGTGGGCATTTGGTCAAAGGATCCGACAGCCCATGTGTTTAGATTAGTGACTAGCACATATTTTAAAGCTAACAATCTCATATTTTTCATTGAAAATGAAGCTCTTCTTTCCCCCCTCACAATCCATGTGCATTGCTTGATTGCTTAGTGTTTCCTAATTTCCCTTGCAATCATTTTGATAGAATCTCACTTATTACTAAATTAGAATGACTGAGATTGGTTATGAGACTTGAATCAAGAAAGGGGTAGCAAGATTGGTACAAGTTAGATGAATTGCAACAAATTTGGTTGTGAGAAGAGATGAAATTGAGAATGTTCTAGGAAATTGAGGAATTGAGAATGTTCTAATGAATTTCTAGTTTCTACTTAAACGTTAACAAAAAAAAAAAAAAAAAATGAGGATAATATTGTAACTTTTGAAAGAATAGAAACACTATTGAAATAAGTGGCAAAATTCTTGTATGATATGATATTAAATTTAACTTCAACATCAATTTAAGCTTTTGGGTTAATCAGTGATTTAAGATGGTATCAAAGCAGATGGTCAATGAGGTTTTGTGTTCAAACCCATGTTACAGTTTATCGATAGTTTATTACTTGTAAACTTTGAGAACTAGATCTAAATTTTATGACGGCCATTTTAAGTTATTCTTGTCCAAACCAAAAAATTATGTTAGAATAAGTTTTAGAACAACTATTTTCTTTGATACACATCCATTTTTGGAGACATTGACTTATACTAATTAAGTTGGGGATTAATGCAGGAGTTTGATAAAGTTCATGGGCCAGCTTGGCATTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAAAAATTGTACATATTGTTGTTTAGAACTAAGATTCAGAAAGCTAATGAATGAGTTTGAGTTCATAGAGAATGGTGAATCTATGTAAAGGCATTCTATCATTATACAAA

mRNA sequence

ATGGCCACTCTAACCAAGCAAATGAAAGGATTCAAATCCTTTTACAAGTCTCGCGATGGAGGTCGGAATGTACCAACTCGTGAACTTGTTTCTATGAGTTCAATGAATAAGACATCAATTTACAAGTATAACTGGTTGGGTAGGAAATCTAAAAAAGCAACTGATCAACACGACGACGGTGGCGGTGGTGGCGGCAGCAGTGAGGAAATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAGTCAGTTTCTCATGTAGAAACAAATTTGGGATCAGTGGCTGCATTTCTTCAAGTGAAAGTTTTGGTATCAGACATGCCTGAGATTATGCAAATTCAAGCTTTTAGGACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTCAGCTCAAAACATATGGCTTACAATATTAAAAAGGTATTTGAGTTTGATAAAGTTCATGGGCCAGCTTGGCATTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAAAAATTGTACATATTGTTGTTTAGAACTAAGATTCAGAAAGCTAATGAATGAGTTTGAGTTCATAGAGAATGGTGAATCTATGTAAAGGCATTCTATCATTATACAAA

Coding sequence (CDS)

ATGGCCACTCTAACCAAGCAAATGAAAGGATTCAAATCCTTTTACAAGTCTCGCGATGGAGGTCGGAATGTACCAACTCGTGAACTTGTTTCTATGAGTTCAATGAATAAGACATCAATTTACAAGTATAACTGGTTGGGTAGGAAATCTAAAAAAGCAACTGATCAACACGACGACGGTGGCGGTGGTGGCGGCAGCAGTGAGGAAATAATGGGAGGAAGAAAAGTGGTGGTTGAAGGTAGGAAGTCAGTTTCTCATGTAGAAACAAATTTGGGATCAGTGGCTGCATTTCTTCAAGTGAAAGTTTTGGTATCAGACATGCCTGAGATTATGCAAATTCAAGCTTTTAGGACTGCAAGGAGAAGTTATGATAGTTTGGAGAAGTTCAGCTCAAAACATATGGCTTACAATATTAAAAAGGTATTTGAGTTTGATAAAGTTCATGGGCCAGCTTGGCATTGTATTGTGGGCTCAAGTTTTGGGTCATTTGTGACCCACTCAACAGGTTGTTTCCTTTATTTTTCAATGGAAAAATTGTACATATTGTTGTTTAGAACTAAGATTCAGAAAGCTAATGAATGA

Protein sequence

MATLTKQMKGFKSFYKSRDGGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDDGGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKANE

Homology

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BLAST of CcUC11G211220 vs. NCBI nr
Match: XP_038890919.1 (uncharacterized protein LOC120080348 [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 6.1e-89
Identity = 176/193 (91.19%), Postives = 178/193 (92.23%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDDG 60
           M TL KQMKGFKSFYKSRDGGRNVPTRE VS SSM+KTSIYKYNWLGRK+KKATDQH  G
Sbjct: 1   MTTLNKQMKGFKSFYKSRDGGRNVPTREPVSTSSMDKTSIYKYNWLGRKTKKATDQHGRG 60

Query: 61  GGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTAR 120
           G      EEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTAR
Sbjct: 61  G------EEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTAR 120

Query: 121 RSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLY 180
           RSYDSLEKFSSKHMAYNIKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLY
Sbjct: 121 RSYDSLEKFSSKHMAYNIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLY 180

Query: 181 ILLFRTKIQKANE 194
           ILLFRTKIQKA E
Sbjct: 181 ILLFRTKIQKATE 185

[Close]

BLAST of CcUC11G211220 vs. NCBI nr
Match: XP_031736570.1 (uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetical protein Csa_019270 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.0e-88
Identity = 176/200 (88.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDDG 60
           MATL KQMKGFKSFYKSRDGGRNV +RE +SMSS++KTSIYKYNWLGRKSKKAT+QH  G
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGGG 60

Query: 61  GGGGGSS-------EEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQI 120
           GGGGG         EEIMGGRKVVVEGRKSVSHVETNLGSVA+FLQVKVLVSDMPEIMQI
Sbjct: 61  GGGGGGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQI 120

Query: 121 QAFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLY 180
           QAFRTARRSYDSLEKFSSKHMAYNIKK  EFDKV+GPAWHCIVGSSFGSFVTHSTGCFLY
Sbjct: 121 QAFRTARRSYDSLEKFSSKHMAYNIKK--EFDKVYGPAWHCIVGSSFGSFVTHSTGCFLY 180

Query: 181 FSMEKLYILLFRTKIQKANE 194
           FSMEKLYILLFRTKIQKA E
Sbjct: 181 FSMEKLYILLFRTKIQKAIE 198

[Close]

BLAST of CcUC11G211220 vs. NCBI nr
Match: XP_008457739.1 (PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 176/194 (90.72%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRD-GGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MATL KQMKGFKSFYKSRD GGRNV +RE VS SS++KTSIYKYNWLGRKSKKATDQH  
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG GG  EEIMGGRKVVVEGRKSVSHVETNLGSVA+FLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSKHMAYNIKK  EFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKK--EFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKA E
Sbjct: 181 YILLFRTKIQKAIE 192

[Close]

BLAST of CcUC11G211220 vs. NCBI nr
Match: XP_022946213.1 (uncharacterized protein LOC111450366 [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 7.5e-79
Identity = 162/194 (83.51%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGG-RNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MA+L KQMKGFKSFYKSRDG   NVP R LVSMSS++KTS+YKYNWL  KSKK +DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQN-- 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
            GGGGG      GGRKVVVEGRKSVS VETNL SVAAFLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  -GGGGG-----CGGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSK+MAYNIKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKANE
Sbjct: 181 YILLFRTKIQKANE 184

[Close]

BLAST of CcUC11G211220 vs. NCBI nr
Match: KAG7030397.1 (hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 4.9e-78
Identity = 160/194 (82.47%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGG-RNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MA+L KQMKGFKSFYKSRDG   NVP R  VSMSS++KTS+YKYNWL  KSKKA+DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNPVSMSSVDKTSVYKYNWLNGKSKKASDQNGG 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG G       GGR VVVEGRKSVS VETNL SVAAFLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  GGGCG------CGGRTVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSK+MAYNIKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKANE
Sbjct: 181 YILLFRTKIQKANE 186

[Close]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 105 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSF 164
           +DMPE MQ  A   A +   +LEKF+  K +A  IKK  EFDK + P WHCIVG +FGS+
Sbjct: 11  ADMPEDMQQDAVDCATQ---ALEKFNIEKDIAAYIKK--EFDKKYNPTWHCIVGRNFGSY 70

Query: 165 VTHSTGCFLYFSMEKLYILLFRT 187
           VTH T  F+YF + ++ +LLF++
Sbjct: 71  VTHETKHFIYFYLGQVAVLLFKS 88

[Close]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot
Match: Q86A88 (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 100 VKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSS 159
           + V  +DMP+ MQ  A     ++++  E    + +A  IKK  EFDK + P WHCIVG S
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKK--EFDKKYSPTWHCIVGKS 67

Query: 160 FGSFVTHSTGCFLYFSMEKLYILLFR 186
           FGSFVTH T  F+YF++ K  +LLF+
Sbjct: 68  FGSFVTHETKNFIYFNINKHSVLLFK 89

[Close]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot
Match: Q39580 (Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-11
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 105 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSF 164
           +DM E MQ  A   A +   +LEK++  K +A  IKK  EFD+ H P WHCIVG +FGS+
Sbjct: 13  ADMSEEMQADAVDCATQ---ALEKYNIEKDIAAYIKK--EFDRKHNPTWHCIVGRNFGSY 72

Query: 165 VTHSTGCFLYFSMEKLYILLFRT 187
           VTH T  F+YF + ++ ILLF++
Sbjct: 73  VTHETKHFIYFYLGQVAILLFKS 90

[Close]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 105 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSF 164
           +DM E MQ  +   A +   +LEK++  K +A +IKK  EFDK + P WHCIVG +FGS+
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKK--EFDKKYNPTWHCIVGRNFGSY 70

Query: 165 VTHSTGCFLYFSMEKLYILLFRT 187
           VTH T  F+YF + ++ ILLF++
Sbjct: 71  VTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 105 SDMPEIMQIQAFRTARRSYDSLEKFS-SKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSF 164
           +DM E MQ  +   A +   +LEK++  K +A +IKK  EFDK + P WHCIVG +FGS+
Sbjct: 11  ADMSEEMQQDSVECATQ---ALEKYNIEKDIAAHIKK--EFDKKYNPTWHCIVGRNFGSY 70

Query: 165 VTHSTGCFLYFSMEKLYILLFRT 187
           VTH T  F+YF + ++ ILLF++
Sbjct: 71  VTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL
Match: A0A0A0LKY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.0e-89
Identity = 176/196 (89.80%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDDG 60
           MATL KQMKGFKSFYKSRDGGRNV +RE +SMSS++KTSIYKYNWLGRKSKKAT+QH  G
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGRNVSSREPISMSSVDKTSIYKYNWLGRKSKKATEQHGGG 60

Query: 61  GGGGGSS---EEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFR 120
           GGGGG     EEIMGGRKVVVEGRKSVSHVETNLGSVA+FLQVKVLVSDMPEIMQIQAFR
Sbjct: 61  GGGGGVGGIREEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFR 120

Query: 121 TARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSME 180
           TARRSYDSLEKFSSKHMAYNIKK  EFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSME
Sbjct: 121 TARRSYDSLEKFSSKHMAYNIKK--EFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSME 180

Query: 181 KLYILLFRTKIQKANE 194
           KLYILLFRTKIQKA E
Sbjct: 181 KLYILLFRTKIQKAIE 194

[Close]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL
Match: A0A1S3C671 (uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.6e-89
Identity = 176/194 (90.72%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRD-GGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MATL KQMKGFKSFYKSRD GGRNV +RE VS SS++KTSIYKYNWLGRKSKKATDQH  
Sbjct: 1   MATLNKQMKGFKSFYKSRDGGGRNVSSREPVSTSSVDKTSIYKYNWLGRKSKKATDQHSG 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
           GGG GG  EEIMGGRKVVVEGRKSVSHVETNLGSVA+FLQVKVLVSDMPEIMQIQAFRTA
Sbjct: 61  GGGAGGIGEEIMGGRKVVVEGRKSVSHVETNLGSVASFLQVKVLVSDMPEIMQIQAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSKHMAYNIKK  EFDKV+GPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKHMAYNIKK--EFDKVYGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKA E
Sbjct: 181 YILLFRTKIQKAIE 192

[Close]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL
Match: A0A6J1G363 (uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC111450366 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.6e-79
Identity = 162/194 (83.51%), Postives = 172/194 (88.66%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGG-RNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MA+L KQMKGFKSFYKSRDG   NVP R LVSMSS++KTS+YKYNWL  KSKK +DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDGAHHNVPARNLVSMSSVDKTSVYKYNWLNGKSKKTSDQN-- 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
            GGGGG      GGRKVVVEGRKSVS VETNL SVAAFLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  -GGGGG-----CGGRKVVVEGRKSVSQVETNLASVAAFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSK+MAYNIKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKANE
Sbjct: 181 YILLFRTKIQKANE 184

[Close]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL
Match: A0A6J1CN34 (uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013113 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.9e-76
Identity = 156/199 (78.39%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRDGGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHD-- 60
           MATL KQ+KGFKSFYKSRDG R+         + +++  +YKYNWLGRKSKKATDQH   
Sbjct: 1   MATLNKQIKGFKSFYKSRDGARDTAA---FDPAPLDRVPVYKYNWLGRKSKKATDQHGGR 60

Query: 61  ---DGGGGGGSSEEIMGGRK-VVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQ 120
              +GGGGGG   E MGGRK +VVEGRKSVSHVETNL SVAAFLQVKVLVSDMPE+MQ+Q
Sbjct: 61  RGMEGGGGGGDGGEGMGGRKLLVVEGRKSVSHVETNLASVAAFLQVKVLVSDMPEMMQLQ 120

Query: 121 AFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYF 180
           AFR+ARRSYDSLEKFSSKHMA++IKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYF
Sbjct: 121 AFRSARRSYDSLEKFSSKHMAHSIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYF 180

Query: 181 SMEKLYILLFRTKIQKANE 194
           SMEKLYILLFRTKIQKA E
Sbjct: 181 SMEKLYILLFRTKIQKATE 194

[Close]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL
Match: A0A6J1KGV2 (uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.1e-75
Identity = 153/194 (78.87%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 1   MATLTKQMKGFKSFYKSRD-GGRNVPTRELVSMSSMNKTSIYKYNWLGRKSKKATDQHDD 60
           MA+L KQMKGFKSFYKSRD    NVP R  +SMSS++KTS+YKYNWL  KSKK +DQ+  
Sbjct: 1   MASLNKQMKGFKSFYKSRDEAHHNVPARNSISMSSVDKTSVYKYNWLNGKSKKDSDQN-- 60

Query: 61  GGGGGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTA 120
                   E   GGRKVVVEGRKSVS VETNL S+A FLQVKVLVSDMPE+MQ++AFRTA
Sbjct: 61  ------CGEVECGGRKVVVEGRKSVSQVETNLASLATFLQVKVLVSDMPEMMQVEAFRTA 120

Query: 121 RRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180
           RRSYDSLEKFSSK+MAYNIKK  EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL
Sbjct: 121 RRSYDSLEKFSSKYMAYNIKK--EFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKL 180

Query: 181 YILLFRTKIQKANE 194
           YILLFRTKIQKANE
Sbjct: 181 YILLFRTKIQKANE 184

[Close]

BLAST of CcUC11G211220 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 157.9 bits (398), Expect = 8.1e-39
Identity = 83/134 (61.94%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 63  GGGSSEEIMGGRKVVVEGRKSVSHVE----TNLGSVAAFLQVKVLVSDMPEIMQIQAFRT 122
           GGG++E          EGRKSVSHVE      + + A  L V++L +DMP  MQ  AFR 
Sbjct: 86  GGGAAE----------EGRKSVSHVERDTAARIEAAAEMLTVRILAADMPGFMQAHAFRC 145

Query: 123 ARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEK 182
           AR + DSLEKFSSKHMA+N+KK  EFDK +GPAWHCIVGSSFGSFVTHSTGCF+YFSM+K
Sbjct: 146 ARMTLDSLEKFSSKHMAFNLKK--EFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDK 205

Query: 183 LYILLFRTKIQKAN 193
           LY+LLF+TK++ A+
Sbjct: 206 LYVLLFKTKVRPAS 207

[Close]

BLAST of CcUC11G211220 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-19
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 100 VKVLVSDMPEIMQIQAFRTARRSYDSLE-KFSSKHMAYNIKKVFEFDKVHGPAWHCIVGS 159
           V+V  SDMP   Q +AF  +R   ++   K  +K +A+ +KK  +FD  +GPAWHCIVG+
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKK--DFDSAYGPAWHCIVGT 95

Query: 160 SFGSFVTHSTGCFLYFSMEKLYILLFRTKIQKANE 194
           SFGS+VTHSTG FLYF ++K+Y+LLF+T ++  ++
Sbjct: 96  SFGSYVTHSTGGFLYFQIDKVYVLLFKTAVEPLDQ 128

[Close]

BLAST of CcUC11G211220 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 98  LQVKVLV--SDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCI 157
           L+ K +V  SDMP  MQ+QA   A ++ D  + F  K +A +IKK  EFD+ +G  W C+
Sbjct: 2   LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKK--EFDERYGSGWQCV 61

Query: 158 VGSSFGSFVTHSTGCFLYFSMEKLYILLFR 186
           VGS+FG F THS G F+YF +E L  L+F+
Sbjct: 62  VGSNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of CcUC11G211220 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-14
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 0


Query: 99  QVKVLVSDMPEIMQIQAFRTARRSYDSLEKFSSKHMAYNIKKVFEFDKVHGPAWHCIVGS 158
           + KV  +DMP  MQ+QA + A +S D  + F S  +A +IKK  EFD+ +G  W C+VG+
Sbjct: 5   KAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKK--EFDERYGSGWQCVVGT 64

Query: 159 SFGSFVTHSTGCFLYFSMEKLYILLFR 186
           +FG F THS G F+YF +  L  L+F+
Sbjct: 65  NFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of CcUC11G211220 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 72.0 bits (175), Expect = 5.8e-13
Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 63  GGGSSEEIMGGRKVVVEGRKSVSHVETNLGSVAAFLQVKVLVSDMPEIMQIQAFRTARRS 122
           GG  ++ I+  R      R S+  VE    S  A  +  +  +DM + MQ +A   A   
Sbjct: 12  GGAPAQTILDDR------RSSLPEVE---ASPPAGKRAVIKSADMKDDMQKEAIEIA--- 71

Query: 123 YDSLEKFS-SKHMAYNIKKVFEFDKVHGPAWHCIVGSSFGSFVTHSTGCFLYFSMEKLYI 182
             + EK+S  K +A NIKK  EFDK HG  WHCIVG +FGS+VTH T  F+YF +++  +
Sbjct: 72  ISAFEKYSVEKDIAENIKK--EFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAV 122

Query: 183 LLFRT 187
           LLF++
Sbjct: 132 LLFKS 122

The following BLAST results are available for this feature:

BLAST of CcUC11G211220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890919.1	6.1e-89	91.19	uncharacterized protein LOC120080348 [Benincasa hispida]	[more]
XP_031736570.1	1.0e-88	88.00	uncharacterized protein LOC101208065 [Cucumis sativus] >KAE8651528.1 hypothetica...	[more]
XP_008457739.1	1.8e-88	90.72	PREDICTED: uncharacterized protein LOC103497357 [Cucumis melo]	[more]
XP_022946213.1	7.5e-79	83.51	uncharacterized protein LOC111450366 [Cucurbita moschata]	[more]
KAG7030397.1	4.9e-78	82.47	hypothetical protein SDJN02_08744, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CcUC11G211220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	1.1e-11	49.40	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q86A88	1.4e-11	45.35	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
Q39580	4.1e-11	48.19	Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=30...	[more]
P61285	9.1e-11	46.99	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	9.1e-11	46.99	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]

BLAST of CcUC11G211220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKY0	3.0e-89	89.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006120 PE=4 SV=1	[more]
A0A1S3C671	8.6e-89	90.72	uncharacterized protein LOC103497357 OS=Cucumis melo OX=3656 GN=LOC103497357 PE=...	[more]
A0A6J1G363	3.6e-79	83.51	uncharacterized protein LOC111450366 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1CN34	4.9e-76	78.39	uncharacterized protein LOC111013113 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1KGV2	7.1e-75	78.87	uncharacterized protein LOC111493764 OS=Cucurbita maxima OX=3661 GN=LOC111493764...	[more]

BLAST of CcUC11G211220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	8.1e-39	61.94	Dynein light chain type 1 family protein	[more]
AT1G23220.1	2.5e-19	48.42	Dynein light chain type 1 family protein	[more]
AT1G52240.2	1.8e-14	46.67	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	6.9e-14	44.83	Dynein light chain type 1 family protein	[more]
AT4G15930.1	5.8e-13	40.00	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 95..186 e-value: 6.4E-35 score: 132.0
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 100..186 e-value: 1.2E-27 score: 96.1
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 65..192
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 101..186 e-value: 3.0E-28 score: 99.9
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 98..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..71
None	No IPR available	PANTHER	PTHR11886:SF37	DYNEIN LIGHT CHAIN-LIKE PROTEIN	coord: 65..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G211220.1	CcUC11G211220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding