CcUC11G210590 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G210590
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein kinase domain-containing protein
Location	CicolChr11: 2494137 .. 2497038 (-)
RNA-Seq Expression	CcUC11G210590
Synteny	CcUC11G210590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTTTGGTTTCGTTTTAAATTTTCTGCTTTTGATATATATGTATGTATGTATATATATATATATATATTTGCTTGTTTCTAATGTTTAAATTGTGGTTTTTATCTTTCTGACAGAAAGATTTGAATTGCTAGTAAAATTTTAAAAGTAAAACAAAGAAATTTACAGATGGAAATAGATAGTGTTTATAACTTTAATTTTCCAAAGTAAGAAAAAAAATCATGTGGTTATTAAACCAGGCCTGAGAGATCCAATTTTAGAATCAGCGAAAACCAAACCACCCAAACATCTTAGATCATTAGCCTGCTTGTGGAGATTTTCGGGTGGTTAGTTTTAAACCTGAGGTTATTTCTTGTTTAAAATGTCATACCTCTTGAATCTTGAAATGATCTAATAGACCTAGTACCTTTCAATTTTGTGTTTAATAAATAAAAAAAAATCATAATCTTTAAATTTTTTATTTTATGATCAAAACTTTATACTGTTCAATAAGAATTCCTTGAACTATCATTAACTTGTTAGAGATTTTTTTTTTTTTCCCCAAAATTCATGGACACGTGTTTTTGGAACTTTTAATTTCTTGTTTAATAGATAAATTAAAAAAGAAATTAAAAGTTCCAAAAACACGTATCCATAAATATTGGGGAAAAAAAAGTTAGAATAATTCAAAGATTTATTAGAAATTTTGGGGATTTATTAAAAGTTTGAAGTTGGGGAGCATGGACTTGTGCCTTTGGCCCAATCTTGAGTACACAAAGTAAATCTGTAATTTAACTCAGAATTTTGAAATAGAAACGTAAGATCCCACGCACAAAAACATCACACTTGGCGTGTGCTGGGCGATCGATAAAACTAAAACCAAGTCGCGCTGTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGAAGAGGAAGGTTTTTATTGGGTGATGGGATGAATGTGTGTTTTGTTTGGGGGGGGGGGGGGGGGGGGGTAATATGAAGAGTATATTACATATTAACTGAATAACTTTAGTTTGTTAACTGGAGTTGGTCGGGATAGAGGGATGTAAACAATTTTATAATTTAAGGAGTTTTTACTCAAAAGCAAATGTCCAGGAATTTTATAGTAAGATAATCTTCTTTGTTCTTTCAATTCTTTAAATTTTCAATACGATACCCAATTGACTCATTAACCAGTTCTTATCACCAAAAGAAAATATCGAACTTAAAAATGGCAGAATGACATTAATGAAATGGTTGCGGTCATTCATTCAATAGCCTAATGATTTGTGGTACAAAGTAATAGTAAGCGTGTATGGGAAGAGGGATGATGAGTTCTAAAACCATGGTGGAATATCTTAAAGCTCAAAGGGAAAATCACACTCTTAAACTGAAGCGAGAGCCCAAGTCCTGTATGTTTGGAAGGATAAATGGGCGAATTATCAACCATGTCCAAGAATCTTTGTCCTTTCTAATAAAAATGCTTCAAAGGTGATCGGAGATTCGGAGCTTGGGATTCTTTTCTTAATTCATTTGTAGGACAATTGATTAGAAGAAATTTGAAGGAAGAAGAGGCCACTGAATGCAGTAATCTGCTGAACTTAGTGCAAGAACTGAGACTATCTAGTCTAACAGGGATGATCGATTGAGATGGGATCTAGATAATTTTGCATACGTTCTTGTTCAATCTTTCGTCAAAGAATTAGGAGATTATTCAACTCTTTTGAAGAGTCTGTCAAAGCTTTGTGGAAGGTGAAAATGAATGTTCTAATCTGGTTAATACTTCAAGGAAATCTGTTAGCGCTGAGTAGGCTTCAAAAGAAGAGTCTGTTCTAATCTTAACAACACATGGGGTGGGGGGACGTCCTCTAACCTCTTGGTCGAAAATATACGCTTGAACCAGTTAAGTCATGCTTCACTTAGGTTGGCAACGAGCGTCCAAATATCGGCTGGAAGTAAATTCAACAAAATATTTAAGCAAAAGTTTCTCATGCAGACAGATCGAACTTGCAGCACCTTCATGGTGCGTTCTTCCCGGATAGATTTGCAGTTGTCATTTTTTTTTCTAAAATATATGTTTTCTGGAGTTCTTTACTTTGTAATCCAGTTTGAGTTCAGTTGTTTTAGGTGGTTTGTTAGTGCTACTTGGTTTATCCAAACAGTTAGATTTATCTTGTAACGGTTCGCTTATCCATGATTTTTTGGTTATTCCTACTAAATTCTACTTTTAATAGTTAGCTCAAGTCATTACAGATAGAAAAACACTACTCGCTAAAATCAGATGGCAAAAAAAGAACTTGTGTAAAAGATAAGTCAGCCAAGGAATGGACCAGAAGCTTACCGTCTTCCAACCATCAGGATCCAAGCAAGCTGTAATCTTGGTGTTAATCCCAGGCAACGGTCCGGGTTCTCGTGTGACCTTTCCCCCACTAAGTTTCACTGCTTCTGCAGTTCTGTACACATCATCTGTACCGATAGCAATCTTTTTCACAGAGAAAGACAGACATGAGTCCTAG

mRNA sequence

ATGGCTGTCAGCCAAGGAATGGACCAGAAGCTTACCGTCTTCCAACCATCAGGATCCAAGCAAGCTGTAATCTTGGTGTTAATCCCAGGCAACGGTCCGGGTTCTCGTGTGACCTTTCCCCCACTAAGTTTCACTGCTTCTGCAGTTCTGTACACATCATCTGTACCGATAGCAATCTTTTTCACAGAGAAAGACAGACATGAGTCCTAG

Coding sequence (CDS)

ATGGCTGTCAGCCAAGGAATGGACCAGAAGCTTACCGTCTTCCAACCATCAGGATCCAAGCAAGCTGTAATCTTGGTGTTAATCCCAGGCAACGGTCCGGGTTCTCGTGTGACCTTTCCCCCACTAAGTTTCACTGCTTCTGCAGTTCTGTACACATCATCTGTACCGATAGCAATCTTTTTCACAGAGAAAGACAGACATGAGTCCTAG

Protein sequence

MAVSQGMDQKLTVFQPSGSKQAVILVLIPGNGPGSRVTFPPLSFTASAVLYTSSVPIAIFFTEKDRHES

Homology

[Close]

BLAST of CcUC11G210590 vs. ExPASy TrEMBL
Match: A0A0D9VEU2 (Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-09
Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 16  PSGSKQAVILVLIPGNGPGSRVTFPPLSFTASAVLYTSSVPIAI 60
           PSGS   VILVLIPGNGPGSR T PP SFT SAVLYTSSVPIAI
Sbjct: 306 PSGSTIDVILVLIPGNGPGSRTTCPPDSFTTSAVLYTSSVPIAI 349

[Close]

BLAST of CcUC11G210590 vs. ExPASy TrEMBL
Match: A0A0D9VEU4 (Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-09
Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 16  PSGSKQAVILVLIPGNGPGSRVTFPPLSFTASAVLYTSSVPIAI 60
           PSGS   VILVLIPGNGPGSR T PP SFT SAVLYTSSVPIAI
Sbjct: 102 PSGSTIDVILVLIPGNGPGSRTTCPPDSFTTSAVLYTSSVPIAI 145

[Close]

BLAST of CcUC11G210590 vs. ExPASy TrEMBL
Match: A0A0D9VEU1 (Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-09
Identity = 37/44 (84.09%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 16  PSGSKQAVILVLIPGNGPGSRVTFPPLSFTASAVLYTSSVPIAI 60
           PSGS   VILVLIPGNGPGSR T PP SFT SAVLYTSSVPIAI
Sbjct: 373 PSGSTIDVILVLIPGNGPGSRTTCPPDSFTTSAVLYTSSVPIAI 416

The following BLAST results are available for this feature:

BLAST of CcUC11G210590 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC11G210590 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC11G210590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D9VEU2	3.2e-09	84.09	Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1	[more]
A0A0D9VEU4	3.2e-09	84.09	Uncharacterized protein OS=Leersia perrieri OX=77586 PE=4 SV=1	[more]
A0A0D9VEU1	3.2e-09	84.09	Protein kinase domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1	[more]

BLAST of CcUC11G210590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G210590.1	CcUC11G210590.1	mRNA