CcUC11G210180 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC11G210180
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L31
LocationCicolChr11: 2080145 .. 2082072 (+)
RNA-Seq ExpressionCcUC11G210180
SyntenyCcUC11G210180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGTAATACGGGCCCTATATGAAGGCTTTTACATAGAGCCCCTAAATATTTTAATTTAAATATGCTCAAATGGGTCTATTTTGGTCCATTCCCTGAGCCCATTTATTATACTCCTTGGCCCATATTTAGACCCAAACTGGATATAATTCAATCTGGGCTTTCTTTAACGAAATCCGCGTGGCAATGAGCCCGCGATAATTTCAATCCTTATATAAATTCAGCATTAGGGTTTTTTTGTGCCTCTGAAGATCTTCTCTTTCGTTGGAGGCCACTCTTCGCGTCGCTGAACGCCAGGTCTCTACTCTTCAACTCTAAACACATCTCTTGAGTTTAGTACTTCATTTTCGCACTTGAAGCTTTGGATATTGGGAAATCATCAACATTTTTGGTTTTAATTACTTTTTTTGTTTTTGCTTCGATCGTCTTACCCACTTCGTCGCATTTCTATTATTTGTTGCTTATGAATCCTCTTATTAGATAGTGCAATCGGATTTTCTGCATCGTAGAACTTAGGATAATTAAAAATTTTCTGCTTATGGTGGACTTGTATTGATTCGCTTACTGGTACAGGTGTTTCTGAAGAGATTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTTCACAAACGCCTTCATGGCTGGTACGTTCATTTTATCTGCCTCTCCTATGTGCTTTTTTCTTTCTTAATGGTCGTTATTTATATTCTAGCTGATTTCACATAATGTACTTTATGTGGAGGAGTAGCCTCGATTTAGTAACTTCAGGATGTTTTTGTACTTCATTTGGAAGTGCGTGCTATGAATTTACTGTTGCTTCGTTTCCCTTGCAACTATGTAGATTGTATTAGATTGGTTATTACTTCAGTTAGTTCTTTCAGTCTATTGAACTCAACTGGGAAAATCAACCCCTGACCTATGTTTGAGATTTGTTGTTAATTGTTAAGGTATGGTTTGTTGCTAGGCGACCATGCTTAATTGGGTGTTAGGTACTGTCTGAGGAAAAACTCAATTATTTGTGTACGAATGACCAGAATTATCATATTGCCCCACTACACAAGCATGTTTTCTTGTATCATCTGGATATAAGATCGAAAAGTTAGAAGTTTTAATTGGTATATTACATGCTCCATTGTTTTGTGTTAGTAGTTTCTCCCAGTGCCTGTGATGTCCAATTCTTTGGACTGTTTTAGTTTATTGCCATATATGGGCACTGATACAGATAGAGTGCAGAGTTTTTTTTTTGTTCACATGTAGATTTATGTATGTCTTAGACCATGATTGACAATTTGACAGTGCATTGTCATTACCTCCCCATTTCTATTTAACGTGCATCTCTATCTATTTTCACGATTGTATCATTTCTGGAAATAGTGTGAACCACAATAATAGTGTTGTTTCTTACTTGTTAGCCCTTAACGTTTGTGAATGAACAGCACCTTTAAGAAGAAGGCTCCCAAGGCTATTAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGAGTTGTCACCTGTTTTTGAGGGTAAGATGAGATTAGGTGCTTGTAGTTTTGATTTGTTGAATGAAAGAAGACTGTCATACTTAATTGTTGTCTTGGAGATTTTTTTTTGTTAAATTAACTCATAGTTCGTGAACTTCCATATTATTAAGTTCAAATGTTTTTGGGTTACGTTGAGCAA

mRNA sequence

ATGAACGTGTTTCTGAAGAGATTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTTCACAAACGCCTTCATGGCTGCTGATTTCACATAATGTACTTTATGTGGAGGACACCTTTAAGAAGAAGGCTCCCAAGGCTATTAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGAGTTGTCACCTGTTTTTGAGGGTAAGATGAGATTAGGTGCTTGTAGTTTTGATTTGTTGAATGAAAGAAGACTGTCATACTTAATTGTTGTCTTGGAGATTTTTTTTTGTTAAATTAACTCATAGTTCGTGAACTTCCATATTATTAAGTTCAAATGTTTTTGGGTTACGTTGAGCAA

Coding sequence (CDS)

ATGAACGTGTTTCTGAAGAGATTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTTCACAAACGCCTTCATGGCTGCTGATTTCACATAATGTACTTTATGTGGAGGACACCTTTAAGAAGAAGGCTCCCAAGGCTATTAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATTTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACTAAAGTCATTGAGGAAGATGATTGA

Protein sequence

MNVFLKRFKNGGEDQREKGGGGYQRVYYQPSQTPSWLLISHNVLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Homology
[Close]
BLAST of CcUC11G210180 vs. NCBI nr
Match: MBA0752557.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 180.6 bits (457), Expect = 9.1e-42
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 43  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 102
           V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
Sbjct: 5   VIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 64

Query: 103 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 65  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 102

[Close]
BLAST of CcUC11G210180 vs. NCBI nr
Match: MBA0816999.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 180.6 bits (457), Expect = 9.1e-42
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 43  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 102
           V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
Sbjct: 59  VIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 118

Query: 103 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 119 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 156

[Close]
BLAST of CcUC11G210180 vs. NCBI nr
Match: XP_008459190.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022999548.1 60S ribosomal protein L31 [Cucurbita maxima] >XP_038889415.1 60S ribosomal protein L31 [Benincasa hispida] >KAA0061504.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7030475.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10769.1 60S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 29  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 89  DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CcUC11G210180 vs. NCBI nr
Match: KAB1996412.1 (hypothetical protein ES319_D13G229500v1 [Gossypium barbadense] >TYH36137.1 hypothetical protein ES332_D13G244400v1 [Gossypium tomentosum])

HSP 1 Score: 178.7 bits (452), Expect = 3.5e-41
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 44  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK 103
           ++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK
Sbjct: 3   VFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK 62

Query: 104 RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 63  RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 99

[Close]
BLAST of CcUC11G210180 vs. NCBI nr
Match: XP_012465111.1 (PREDICTED: 60S ribosomal protein L31-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 177.9 bits (450), Expect = 5.9e-41
Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 0 

Query: 44  LYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK 103
           ++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK
Sbjct: 3   VFVYSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARK 62

Query: 104 RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 63  RNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 99

[Close]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-40
Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDE
Sbjct: 29  TFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIPA+GLKGLGTK+IE++D
Sbjct: 89  DAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.2e-40
Identity = 84/92 (91.30%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 30  TFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 89

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIP  GLKGLGT+VI+E++
Sbjct: 90  DAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-39
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDE
Sbjct: 28  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDE 87

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 88  DAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.7e-39
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDE
Sbjct: 28  TFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDE 87

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 88  DAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.8e-39
Identity = 82/92 (89.13%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDE
Sbjct: 29  TFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVA+IPA  LKGLG ++IEEDD
Sbjct: 89  DAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match: A0A7J9CVQ4 (Uncharacterized protein (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_001383 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.4e-42
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 43  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 102
           V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
Sbjct: 5   VIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 64

Query: 103 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 65  KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 102

[Close]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match: A0A7J9I4G3 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_001602 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.4e-42
Identity = 91/98 (92.86%), Postives = 96/98 (97.96%), Query Frame = 0 

Query: 43  VLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 102
           V++V  TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR
Sbjct: 59  VIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIAR 118

Query: 103 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 119 KRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 156

[Close]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match: A0A5D3CKL3 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00820 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 29  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 89  DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match: A0A6J1KK05 (60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 29  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 89  DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match: A0A6J1G2V4 (60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 29  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 88

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 89  DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of CcUC11G210180 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 164.1 bits (414), Expect = 8.2e-41
Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDE
Sbjct: 28  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDE 87

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 88  DAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CcUC11G210180 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-40
Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDE
Sbjct: 28  TFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDE 87

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
           DAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 88  DAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of CcUC11G210180 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 158.3 bits (399), Expect = 4.5e-39
Identity = 88/124 (70.97%), Postives = 97/124 (78.23%), Query Frame = 0 

Query: 17  EKGGGGYQRVYYQPSQTPSWLLISHNVLYVEDTFKKKAPKAIKEIRKFAEKAMGTKDVRV 76
           EKG G  + V      T  + +  H  L+   TFKKKAP AIKEIRKFA KAMGTKDVRV
Sbjct: 2   EKGKGRKEEVV-----TREYTINLHRRLH-SCTFKKKAPNAIKEIRKFALKAMGTKDVRV 61

Query: 77  DVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI 136
           DVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI
Sbjct: 62  DVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVI 119

Query: 137 EEDD 141
           EE++
Sbjct: 122 EEEE 119

[Close]
BLAST of CcUC11G210180 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 54/92 (58.70%), Postives = 56/92 (60.87%), Query Frame = 0 

Query: 49  TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 108
           TFKKKAPKAIKEIRKFAEKAMGTKDVRVD                               
Sbjct: 28  TFKKKAPKAIKEIRKFAEKAMGTKDVRVD------------------------------- 85

Query: 109 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 141
              EE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 88  ---EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:
BLAST of CcUC11G210180 vs. NCBI nr
Match NameE-valueIdentityDescription
MBA0752557.19.1e-4292.86hypothetical protein [Gossypium gossypioides][more]
MBA0816999.19.1e-4292.86hypothetical protein [Gossypium harknessii][more]
XP_008459190.12.6e-41100.00PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosoma... [more]
KAB1996412.13.5e-4192.78hypothetical protein ES319_D13G229500v1 [Gossypium barbadense] >TYH36137.1 hypot... [more]
XP_012465111.15.9e-4192.78PREDICTED: 60S ribosomal protein L31-like isoform X2 [Gossypium raimondii][more]
BLAST of CcUC11G210180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P462901.0e-4091.3060S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
Q9M5735.2e-4091.3060S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
P514201.2e-3990.2260S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
Q9STR15.7e-3988.0460S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1[more]
Q9MAV79.8e-3989.1360S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1[more]
BLAST of CcUC11G210180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J9CVQ44.4e-4292.86Uncharacterized protein (Fragment) OS=Gossypium gossypioides OX=34282 GN=Gogos_0... [more]
A0A7J9I4G34.4e-4292.86Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_001602 PE=3 SV... [more]
A0A5D3CKL31.3e-41100.0060S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1KK051.3e-41100.0060S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1[more]
A0A6J1G2V41.3e-41100.0060S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111450292 PE=3 SV=... [more]
BLAST of CcUC11G210180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56710.18.2e-4190.22Ribosomal protein L31e family protein [more]
AT4G26230.14.1e-4088.04Ribosomal protein L31e family protein [more]
AT2G19740.14.5e-3970.97Ribosomal protein L31e family protein [more]
AT5G56710.22.0e-1858.70Ribosomal protein L31e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 42..113
e-value: 3.4E-31
score: 119.6
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 49..112
e-value: 9.8E-31
score: 105.8
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 48..140
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 49..112
e-value: 1.36418E-28
score: 98.4104
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 39..140
e-value: 2.9E-38
score: 132.2
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 49..112
NoneNo IPR availablePANTHERPTHR10956:SF38OS06G0319700 PROTEINcoord: 48..140
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 74..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC11G210180.1CcUC11G210180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome