CcUC11G209390 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCAACGACGGAGGAGAGCGAGCCGGTTAGAATTGAGCTGCCGGAGGTTGGAAGAATAAGAAGCTTTAGTTCGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAGCTCGACCATGGCAGTGGAGGAGGAGGACAAGAGAGATACCGTAGATGCTTCTCTTTGGGCAGCGGTTGAGAGATTACCGACGTTTGAACGGTTGAGATCTTCATTGTTCGACGACGACGTTGGAGGAGTAGAAGTTGAGGAGAATGATGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTCATTCAAAAGCTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTCACAAAAATTAAAGAGAGAATCTACAAGTAA ATGGCTCCAACGACGGAGGAGAGCGAGCCGGTTAGAATTGAGCTGCCGGAGGTTGGAAGAATAAGAAGCTTTAGTTCGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAGCTCGACCATGGCAGTGGAGGAGGAGGACAAGAGAGATACCGTAGATGCTTCTCTTTGGGCAGCGGTTGAGAGATTACCGACGTTTGAACGGTTGAGATCTTCATTGTTCGACGACGACGTTGGAGGAGTAGAAGTTGAGGAGAATGATGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTCATTCAAAAGCTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTCACAAAAATTAAAGAGAGAATCTACAAGTAA ATGGCTCCAACGACGGAGGAGAGCGAGCCGGTTAGAATTGAGCTGCCGGAGGTTGGAAGAATAAGAAGCTTTAGTTCGTCATTCCGCCAACAGAATTCGAGTTTTCGAAGCAGCTCGACCATGGCAGTGGAGGAGGAGGACAAGAGAGATACCGTAGATGCTTCTCTTTGGGCAGCGGTTGAGAGATTACCGACGTTTGAACGGTTGAGATCTTCATTGTTCGACGACGACGTTGGAGGAGTAGAAGTTGAGGAGAATGATGGGAGAAGAGTTGTTGATGTTACTAAGCTTGGAGATGTGGAGCGCCATCTCTTCATTCAAAAGCTCATCAAACACATTGAAAATGATAATCTCAAGCTCTTCACAAAAATTAAAGAGAGAATCTACAAGTAA MAPTTEESEPVRIELPEVGRIRSFSSSFRQQNSSFRSSSTMAVEEEDKRDTVDASLWAAVERLPTFERLRSSLFDDDVGGVEVEENDGRRVVDVTKLGDVERHLFIQKLIKHIENDNLKLFTKIKERIYK Homology
BLAST of CcUC11G209390 vs. NCBI nr
Match: XP_038892176.1 (pleiotropic drug resistance protein 3-like [Benincasa hispida]) HSP 1 Score: 191.8 bits (486), Expect = 3.7e-45 Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 0
BLAST of CcUC11G209390 vs. NCBI nr
Match: XP_031741892.1 (pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 9.0e-44 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CcUC11G209390 vs. NCBI nr
Match: XP_031745924.1 (ABC transporter G family member 37-like [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 9.0e-44 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CcUC11G209390 vs. NCBI nr
Match: KAE8637316.1 (hypothetical protein CSA_019102, partial [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 9.0e-44 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CcUC11G209390 vs. NCBI nr
Match: XP_004140460.1 (pleiotropic drug resistance protein 3 isoform X1 [Cucumis sativus] >KGN50690.2 hypothetical protein Csa_004732 [Cucumis sativus]) HSP 1 Score: 187.2 bits (474), Expect = 9.0e-44 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.8e-26 Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.4e-25 Identity = 69/131 (52.67%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy Swiss-Prot
Match: Q7PC82 (ABC transporter G family member 42 OS=Arabidopsis thaliana OX=3702 GN=ABCG42 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy Swiss-Prot
Match: Q7PC83 (ABC transporter G family member 41 OS=Arabidopsis thaliana OX=3702 GN=ABCG41 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy TrEMBL
Match: A0A0A0KMI3 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G292220 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy TrEMBL
Match: A0A5D3CR38 (Pleiotropic drug resistance protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00570 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42 Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy TrEMBL
Match: A0A1S3C5F9 (LOW QUALITY PROTEIN: pleiotropic drug resistance protein 3-like OS=Cucumis melo OX=3656 GN=LOC103496678 PE=3 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 4.1e-42 Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy TrEMBL
Match: A0A6J1DJT5 (pleiotropic drug resistance protein 3-like OS=Momordica charantia OX=3673 GN=LOC111021552 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.7e-36 Identity = 95/132 (71.97%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of CcUC11G209390 vs. ExPASy TrEMBL
Match: A0A1S3B6X0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.7e-28 Identity = 81/132 (61.36%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of CcUC11G209390 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 ) HSP 1 Score: 117.9 bits (294), Expect = 6.3e-27 Identity = 72/127 (56.69%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of CcUC11G209390 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 ) HSP 1 Score: 97.4 bits (241), Expect = 8.8e-21 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CcUC11G209390 vs. TAIR 10
Match: AT4G15233.1 (ABC-2 and Plant PDR ABC-type transporter family protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CcUC11G209390 vs. TAIR 10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CcUC11G209390 vs. TAIR 10
Match: AT4G15215.1 (pleiotropic drug resistance 13 ) HSP 1 Score: 67.4 bits (163), Expect = 9.7e-12 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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