CcUC10G207970 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G207970
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein Wnt-3a like
Location	CicolChr10: 34687338 .. 34688321 (-)
RNA-Seq Expression	CcUC10G207970
Synteny	CcUC10G207970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGAGGCGACAGACAGGCACGGCTACATGCACATGTCAATCCTTCTTTACCATAATGTCTGCTGGTTTGGTTTCTTTGCATTCTTGTTTGTGTATGACTTGCCATTTTCATGCGCTATTTATCTCAAAACGTAAGACCATACGGTTAGCACGCACAGTCGTTTAGTGAGGTCGTAATACGTAGCATGGGAATTATAGTTGACATGGGGTTCAAATTTCTGACTTCCTGCATGGGCATAAGATGATGTTTGACATTCAAAGGAAGATTCCAAATGCAGGTTTCTAGGGGCATCAACTTTCAAGGATCGTGATAAACATTGGGGAATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTATAATAAGCCATCGAAGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCAATAAAAAAGAAAACGTACGGTATTGGTTTGGTCCAAATAAAGGCACAGTTAATGGCTTTAGCTTCTTCCAAGTTTCTCAGGGCAACTTTGATAATGTGATTTAAACAGTTTACACATCGATTTGGAGAGCATTGCCTGTTTGGTTTCTGATGCAGTCACAGCCGATACCTTAACAGGAGAAATGGCAGTGATCAATAAATTTGGGGATGAACACAGCAACTTGTTGGACCGATACGAGAGACTGAGCTTTGAAGTGCGACTAAACCAAGCGATGTTGGAGCGAAGTCTTTCGGAGCCGAGGACGCTGAGATCTCAACCGCGGGCGCAATTTACTGGCCCTGGCTCAGGCTCAGTTCAACTACCATATTTGGTAACAACAACAACTACTACTACTCAGCAGCCCAGACAAGGACGCCGTGGATCCACATTCAACTTCAACAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAAGAGTAGGGCAAAGAAGGAACTCCCACATTTCAAAAACCCCTTGTCTTGGAAAGCCCTCAGCAAATCCATGCGCCTTTGA

mRNA sequence

ATGAGGATCGTGATAAACATTGGGGAATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTATAATAAGCCATCGAAGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCAATAAAAAAGAAAACGTACGGTATTGGTTTGGTCCAAATAAAGGCACAGTTAATGGCTTTAGCTTCTTCCAAGTTTCTCAGGGCAACTTTGATAATTTTACACATCGATTTGGAGAGCATTGCCTGTTTGGTTTCTGATGCAGTCACAGCCGATACCTTAACAGGAGAAATGGCAGTGATCAATAAATTTGGGGATGAACACAGCAACTTGTTGGACCGATACGAGAGACTGAGCTTTGAAGTGCGACTAAACCAAGCGATGTTGGAGCGAAGTCTTTCGGAGCCGAGGACGCTGAGATCTCAACCGCGGGCGCAATTTACTGGCCCTGGCTCAGGCTCAGTTCAACTACCATATTTGGTAACAACAACAACTACTACTACTCAGCAGCCCAGACAAGGACGCCGTGGATCCACATTCAACTTCAACAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAAGAGTAGGGCAAAGAAGGAACTCCCACATTTCAAAAACCCCTTGTCTTGGAAAGCCCTCAGCAAATCCATGCGCCTTTGA

Coding sequence (CDS)

ATGAGGATCGTGATAAACATTGGGGAATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTATAATAAGCCATCGAAGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCAATAAAAAAGAAAACGTACGGTATTGGTTTGGTCCAAATAAAGGCACAGTTAATGGCTTTAGCTTCTTCCAAGTTTCTCAGGGCAACTTTGATAATTTTACACATCGATTTGGAGAGCATTGCCTGTTTGGTTTCTGATGCAGTCACAGCCGATACCTTAACAGGAGAAATGGCAGTGATCAATAAATTTGGGGATGAACACAGCAACTTGTTGGACCGATACGAGAGACTGAGCTTTGAAGTGCGACTAAACCAAGCGATGTTGGAGCGAAGTCTTTCGGAGCCGAGGACGCTGAGATCTCAACCGCGGGCGCAATTTACTGGCCCTGGCTCAGGCTCAGTTCAACTACCATATTTGGTAACAACAACAACTACTACTACTCAGCAGCCCAGACAAGGACGCCGTGGATCCACATTCAACTTCAACAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAAGAGTAGGGCAAAGAAGGAACTCCCACATTTCAAAAACCCCTTGTCTTGGAAAGCCCTCAGCAAATCCATGCGCCTTTGA

Protein sequence

MRIVINIGESMSPSLGPAPLVYNKPSKENKQDSLLVAFKQAIKKKTYGIGLVQIKAQLMALASSKFLRATLIILHIDLESIACLVSDAVTADTLTGEMAVINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGSGSVQLPYLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRAKKELPHFKNPLSWKALSKSMRL

Homology

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BLAST of CcUC10G207970 vs. NCBI nr
Match: KAG6580428.1 (hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-38
Identity = 94/127 (74.02%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 98  MAVINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGSGSVQL 157
           MAV+ KFGDEHSNLLD+YER SFE RLNQA+L RSLSEPRTLRSQ + Q     SGSV+L
Sbjct: 1   MAVVKKFGDEHSNLLDQYERRSFEARLNQAILGRSLSEPRTLRSQQQPQPQLSASGSVRL 60

Query: 158 PYLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILER--KSRAKKELPHFKNPLSWKA 217
           P LV   TT++ QPR+G RGSTFNFN I+NKLLKPIL R  KSRAKKELP F+NP+SWKA
Sbjct: 61  PCLV---TTSSNQPRKGGRGSTFNFNKIINKLLKPILGRKSKSRAKKELPDFRNPVSWKA 120

Query: 218 LSKSMRL 223
           LSKSMRL
Sbjct: 121 LSKSMRL 124

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BLAST of CcUC10G207970 vs. NCBI nr
Match: OAY41638.1 (hypothetical protein MANES_09G117900v8 [Manihot esculenta])

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-18
Identity = 69/127 (54.33%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 97  EMAVI-NKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGSGSV 156
           E+AVI  +FGDE S LLD++ERL+FEV+LNQA+L RSLSEP    S  R++F  P +G  
Sbjct: 3   EIAVILKRFGDEQSTLLDQFERLTFEVQLNQAILGRSLSEP----SVGRSRFQVPLNGE- 62

Query: 157 QLPYLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRAKKELPHFKNPLSWKA 216
             P LV    T  +Q R+ RRGS   FN +L KLLKPI  RK  AKKE+   KNP SWKA
Sbjct: 63  DPPALV----TQVRQGRRRRRGS--GFNKVLMKLLKPIFRRKDGAKKEVLDPKNPKSWKA 118

Query: 217 LSKSMRL 223
            S+S+R+
Sbjct: 123 FSRSLRV 118

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BLAST of CcUC10G207970 vs. NCBI nr
Match: XP_016667768.1 (uncharacterized protein LOC107888144 [Gossypium hirsutum] >XP_017646749.1 PREDICTED: uncharacterized protein LOC108487042 [Gossypium arboreum] >KAB2041065.1 hypothetical protein ES319_D02G123800v1 [Gossypium barbadense] >MBA0765396.1 hypothetical protein [Gossypium trilobum] >MBA0798226.1 hypothetical protein [Gossypium harknessii] >TYG79348.1 hypothetical protein ES288_D02G131800v1 [Gossypium darwinii] >TYH83525.1 hypothetical protein ES332_D02G137900v1 [Gossypium tomentosum] >TYI93313.1 hypothetical protein E1A91_D02G128800v1 [Gossypium mustelinum])

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-17
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTL-RSQPRAQFTGPGSGSVQLP 159
           V+ +FGDE S LLD++ERLSFEV+LNQA+L RSLSEP    RSQ  +QF  P        
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 160 YLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRA-KKELPHFKNPLSWKALS 219
                      + R+GRRGS   FN +L KLLKPIL RK  A KK +   +NP+SWKA S
Sbjct: 76  -----PPAVKPKGRKGRRGS--GFNRVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFS 125

Query: 220 KSMRL 223
           +S+RL
Sbjct: 136 RSLRL 125

[Close]

BLAST of CcUC10G207970 vs. NCBI nr
Match: EOY04453.1 (Uncharacterized protein TCM_019698 [Theobroma cacao])

HSP 1 Score: 99.0 bits (245), Expect = 5.5e-17
Identity = 62/124 (50.00%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGSGSVQLPY 159
           ++ +FGDE S LLD +ERLSFEV+LNQA+L RSLSEP   +    +QF  P       P 
Sbjct: 31  ILRRFGDEQSTLLDEFERLSFEVQLNQAILGRSLSEPSVAKRTLHSQFQAP-------PP 90

Query: 160 LVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERK-SRAKKELPHFKNPLSWKALSK 219
            V          R+GRRGS   FN +L KLLKPIL RK S  +K +   KNP+SWKA S+
Sbjct: 91  AV----------RKGRRGS--GFNRVLKKLLKPILGRKGSAGRKPVADPKNPMSWKAFSR 135

Query: 220 SMRL 223
           S+RL
Sbjct: 151 SLRL 135

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BLAST of CcUC10G207970 vs. NCBI nr
Match: GFY82440.1 (hypothetical protein Acr_02g0006800 [Actinidia rufa])

HSP 1 Score: 98.6 bits (244), Expect = 7.2e-17
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 93  TLTGEMAVINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGS 152
           T+ G   ++ +FGDE S LLD++ERL+FE +L++A+L RSLSEP + R+QP      P  
Sbjct: 3   TMDGIEVILKRFGDEQSTLLDQFERLAFEAQLSRAILGRSLSEPSSYRTQPPLLLLAPPP 62

Query: 153 GSVQLPYLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRAKKELPHFKNPLS 212
           G    P          Q    GRRG+   F  +L  LLKPIL R+   +KE P  K+P  
Sbjct: 63  GMAVAP----------QARPGGRRGARLGFKKVLKSLLKPILRRRPGGRKEGPDPKDPRL 122

Query: 213 WKALSKSMRL 223
           WK+ S+SMR+
Sbjct: 123 WKSFSRSMRV 122

[Close]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL
Match: A0A2C9VA13 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G117900 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 69/127 (54.33%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 97  EMAVI-NKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTLRSQPRAQFTGPGSGSV 156
           E+AVI  +FGDE S LLD++ERL+FEV+LNQA+L RSLSEP    S  R++F  P +G  
Sbjct: 3   EIAVILKRFGDEQSTLLDQFERLTFEVQLNQAILGRSLSEP----SVGRSRFQVPLNGE- 62

Query: 157 QLPYLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRAKKELPHFKNPLSWKA 216
             P LV    T  +Q R+ RRGS   FN +L KLLKPI  RK  AKKE+   KNP SWKA
Sbjct: 63  DPPALV----TQVRQGRRRRRGS--GFNKVLMKLLKPIFRRKDGAKKEVLDPKNPKSWKA 118

Query: 217 LSKSMRL 223
            S+S+R+
Sbjct: 123 FSRSLRV 118

[Close]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL
Match: A0A5D2ZV76 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G099500v1 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTL-RSQPRAQFTGPGSGSVQLP 159
           V+ +FGDE S LLD++ERLSFEV+LNQA+L RSLSEP    RSQ  +QF  P        
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 160 YLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRA-KKELPHFKNPLSWKALS 219
                      + R+GRRGS   FN +L KLLKPIL RK  A KK +   +NP+SWKA S
Sbjct: 76  -----PPAVKPKGRKGRRGS--GFNRVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFS 125

Query: 220 KSMRL 223
           +S+RL
Sbjct: 136 RSLRL 125

[Close]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL
Match: A0A5D2LWW4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G137900v1 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTL-RSQPRAQFTGPGSGSVQLP 159
           V+ +FGDE S LLD++ERLSFEV+LNQA+L RSLSEP    RSQ  +QF  P        
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 160 YLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRA-KKELPHFKNPLSWKALS 219
                      + R+GRRGS   FN +L KLLKPIL RK  A KK +   +NP+SWKA S
Sbjct: 76  -----PPAVKPKGRKGRRGS--GFNRVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFS 125

Query: 220 KSMRL 223
           +S+RL
Sbjct: 136 RSLRL 125

[Close]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL
Match: A0A6P4P769 (uncharacterized protein LOC108487042 OS=Gossypium arboreum OX=29729 GN=LOC108487042 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTL-RSQPRAQFTGPGSGSVQLP 159
           V+ +FGDE S LLD++ERLSFEV+LNQA+L RSLSEP    RSQ  +QF  P        
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 160 YLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRA-KKELPHFKNPLSWKALS 219
                      + R+GRRGS   FN +L KLLKPIL RK  A KK +   +NP+SWKA S
Sbjct: 76  -----PPAVKPKGRKGRRGS--GFNRVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFS 125

Query: 220 KSMRL 223
           +S+RL
Sbjct: 136 RSLRL 125

[Close]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL
Match: A0A1U8HUZ0 (uncharacterized protein LOC107888144 OS=Gossypium hirsutum OX=3635 GN=LOC107888144 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 100 VINKFGDEHSNLLDRYERLSFEVRLNQAMLERSLSEPRTL-RSQPRAQFTGPGSGSVQLP 159
           V+ +FGDE S LLD++ERLSFEV+LNQA+L RSLSEP    RSQ  +QF  P        
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 160 YLVTTTTTTTQQPRQGRRGSTFNFNNILNKLLKPILERKSRA-KKELPHFKNPLSWKALS 219
                      + R+GRRGS   FN +L KLLKPIL RK  A KK +   +NP+SWKA S
Sbjct: 76  -----PPAVKPKGRKGRRGS--GFNRVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFS 125

Query: 220 KSMRL 223
           +S+RL
Sbjct: 136 RSLRL 125

The following BLAST results are available for this feature:

BLAST of CcUC10G207970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580428.1	1.9e-38	74.02	hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sorori...	[more]
OAY41638.1	2.9e-18	54.33	hypothetical protein MANES_09G117900v8 [Manihot esculenta]	[more]
XP_016667768.1	3.2e-17	51.20	uncharacterized protein LOC107888144 [Gossypium hirsutum] >XP_017646749.1 PREDIC...	[more]
EOY04453.1	5.5e-17	50.00	Uncharacterized protein TCM_019698 [Theobroma cacao]	[more]
GFY82440.1	7.2e-17	42.31	hypothetical protein Acr_02g0006800 [Actinidia rufa]	[more]

BLAST of CcUC10G207970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G207970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2C9VA13	1.4e-18	54.33	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G117900 PE=4 SV=...	[more]
A0A5D2ZV76	1.6e-17	51.20	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G099500v1 P...	[more]
A0A5D2LWW4	1.6e-17	51.20	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G137900v1 P...	[more]
A0A6P4P769	1.6e-17	51.20	uncharacterized protein LOC108487042 OS=Gossypium arboreum OX=29729 GN=LOC108487...	[more]
A0A1U8HUZ0	1.6e-17	51.20	uncharacterized protein LOC107888144 OS=Gossypium hirsutum OX=3635 GN=LOC1078881...	[more]

BLAST of CcUC10G207970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..153
None	No IPR available	PANTHER	PTHR48196	FAMILY NOT NAMED	coord: 99..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G207970.1	CcUC10G207970.1	mRNA