CcUC10G207950 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G207950
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr10: 34685503 .. 34686216 (-)
RNA-Seq Expression	CcUC10G207950
Synteny	CcUC10G207950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGCTTGTGTAAGGTGGGCCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAAGAAAATGGTTTAAAACCAAGTGTAGGCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCAGTGGATGGAATCTATGTGTTGAACAAAATGAAGCAAATCAACTGTACGCCCGATCGCACTCTGCTACACGGGCTGATAAAATGGGATAAAATCCGAATAGCCTTGAGGACGTACAAGGAAATGGTTAGCTCAGGCCACACCATCGAAGCAAAAATGATGAATACCTTCACGAGAGCGTTATGCAGGAGATCCTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGGACGAGTTTCAAGTCATCGATCGGAGTACATATGGCCTGCTGATCCAAGCACTGTGTTCAAACATGGTTTCGGAGGCTCTGGCAAATTTGCATCATATGATTGAAAGAGGGTACCCTCCAAGAGCGGCTACCATTGACGTTGTTCAAACGCTTTGCCATAAGGGAAGCGTCAATGAAGCATTGTGTGTTTTGAGGCATGGAATACCTTTCAGAAGAATTTCTTTTGACTTGATAATTGATGAGCTAAATAAACAAGGAATGTGGTTTAGTGCTTGTAACGTATATGCTTTAGCTTTGAAACGAGGTGTTAAGCCCAGGAAGACCCCAAGATAA

mRNA sequence

ATGGATGGCTTGTGTAAGGTGGGCCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAAGAAAATGGTTTAAAACCAAGTGTAGGCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCAGTGGATGGAATCTATGTGTTGAACAAAATGAAGCAAATCAACTGTACGCCCGATCGCACTCTGCTACACGGGCTGATAAAATGGGATAAAATCCGAATAGCCTTGAGGACGTACAAGGAAATGGTTAGCTCAGGCCACACCATCGAAGCAAAAATGATGAATACCTTCACGAGAGCGTTATGCAGGAGATCCTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGGACGAGTTTCAAGTCATCGATCGGAGTACATATGGCCTGCTGATCCAAGCACTGTGTTCAAACATGGTTTCGGAGGCTCTGGCAAATTTGCATCATATGATTGAAAGAGGGTACCCTCCAAGAGCGGCTACCATTGACGTTGTTCAAACGCTTTGCCATAAGGGAAGCGTCAATGAAGCATTGTGTGTTTTGAGGCATGGAATACCTTTCAGAAGAATTTCTTTTGACTTGATAATTGATGAGCTAAATAAACAAGGAATGTGGTTTAGTGCTTGTAACGTATATGCTTTAGCTTTGAAACGAGGTGTTAAGCCCAGGAAGACCCCAAGATAA

Coding sequence (CDS)

ATGGATGGCTTGTGTAAGGTGGGCCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAAGAAAATGGTTTAAAACCAAGTGTAGGCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGACCAGTGGATGGAATCTATGTGTTGAACAAAATGAAGCAAATCAACTGTACGCCCGATCGCACTCTGCTACACGGGCTGATAAAATGGGATAAAATCCGAATAGCCTTGAGGACGTACAAGGAAATGGTTAGCTCAGGCCACACCATCGAAGCAAAAATGATGAATACCTTCACGAGAGCGTTATGCAGGAGATCCTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAGGACGAGTTTCAAGTCATCGATCGGAGTACATATGGCCTGCTGATCCAAGCACTGTGTTCAAACATGGTTTCGGAGGCTCTGGCAAATTTGCATCATATGATTGAAAGAGGGTACCCTCCAAGAGCGGCTACCATTGACGTTGTTCAAACGCTTTGCCATAAGGGAAGCGTCAATGAAGCATTGTGTGTTTTGAGGCATGGAATACCTTTCAGAAGAATTTCTTTTGACTTGATAATTGATGAGCTAAATAAACAAGGAATGTGGTTTAGTGCTTGTAACGTATATGCTTTAGCTTTGAAACGAGGTGTTAAGCCCAGGAAGACCCCAAGATAA

Protein sequence

MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINCTPDRTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLLEDAHQVFEKMKDEFQVIDRSTYGLLIQALCSNMVSEALANLHHMIERGYPPRAATIDVVQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRKTPR

Homology

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BLAST of CcUC10G207950 vs. NCBI nr
Match: XP_038904608.1 (pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 8.8e-114
Identity = 212/243 (87.24%), Postives = 219/243 (90.12%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL EAE NGLKPSV TFNTLFNGYCKEGRPVDGIYVLNKMKQINC
Sbjct: 244 MDGLCKVGRSDEAMELLIEAEGNGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 303

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLLHGLIKW KIRIAL TYKEMVSSGHTIEAKMMNTF RALCRRSW EKDLL
Sbjct: 304 TPDRITYTTLLHGLIKWGKIRIALSTYKEMVSSGHTIEAKMMNTFMRALCRRSWNEKDLL 363

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATID-V 180
           EDAHQVFEKMKD++QVID+STYGLLIQALCS NM+SEALANLHHMIE+GY PRA  ID V
Sbjct: 364 EDAHQVFEKMKDDYQVIDQSTYGLLIQALCSGNMISEALANLHHMIEKGYSPRAIIIDVV 423

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQTLCH+GSV+EAL VL HGIPFRR SFDLIIDELNKQ M FSACNVY LALKRGV P K
Sbjct: 424 VQTLCHRGSVDEALLVLGHGIPFRRFSFDLIIDELNKQEMRFSACNVYGLALKRGVNPTK 483

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BLAST of CcUC10G207950 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108
Identity = 200/243 (82.30%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLL GLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRRSWKEKDLL
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+E QVIDRSTYGLLIQALCS N  SEALANLHHMI +GY PRA TIDV 
Sbjct: 370 EDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH G  +EALCVL HGI F RISFDLII+ELN++GMWFSACNVY LALKRG+KP K
Sbjct: 430 VQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTK 489

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BLAST of CcUC10G207950 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.1 bits (1032), Expect = 3.3e-108
Identity = 199/243 (81.89%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLL GLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRR+WKEKDLL
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+E QVIDRSTYGLLIQALCS N  SEALANLHHMI +GY PRA TIDV 
Sbjct: 370 EDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH G  +EALCVL HGI F RISFDLII+ELN++GMWFSACNVY LALKRG+KP K
Sbjct: 430 VQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTK 489

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BLAST of CcUC10G207950 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 401.7 bits (1031), Expect = 4.2e-108
Identity = 198/243 (81.48%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLL GLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRR+WKEKDLL
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+E QVIDRSTYGLLIQALCS N  SEALANLHHMI +GY PRA TIDV 
Sbjct: 370 EDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH G  +EALCVL HGI F RISFDL+I+ELN++GMWFSACNVY LALKRG+KP K
Sbjct: 430 VQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKPTK 489

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BLAST of CcUC10G207950 vs. NCBI nr
Match: XP_023528121.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.0 bits (1029), Expect = 7.2e-108
Identity = 198/243 (81.48%), Postives = 212/243 (87.24%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLL GLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRRSWKEKDLL
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+E QV+DRSTYGLLIQALCS N   EALANLHHMI +GY PRA TIDV 
Sbjct: 370 EDAHQVFEKMKNELQVVDRSTYGLLIQALCSGNRTCEALANLHHMIGKGYSPRAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH G  +EALCVL HGI F RISFDLII+ELN++GMWFSACNVY LALKRG+KP K
Sbjct: 430 VQALCHSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNVYGLALKRGIKPTK 489

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BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-24
Identity = 79/272 (29.04%), Postives = 122/272 (44.85%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DG CK+G+ DEA  +LNE   +GLKP+   FN L + +CKE R  + + +  +M +  C
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRR-SWKEKDL 120
            PD     +L+ GL + D+I+ AL   ++M+S G        NT   A  RR   KE   
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550

Query: 121 L-----------------------------EDAHQVFEKMKDEFQVIDRSTYGLLIQALC 180
           L                             + A  +FEKM  +       +  +LI  LC
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610

Query: 181 -SNMVSEALANLHHMIERGYPPRAATID-VVQTLCHKGSVNEALCVLR----HGIPFRRI 233
            S MV EA+     M+ RG  P   T + ++  LC  G + + L + R     GIP   +
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670

[Close]

BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.5e-19
Identity = 62/232 (26.72%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +D LCK G  D+A+ L NE E  G+K  V T+++L  G C +G+  DG  +L +M   N 
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD      L+   +K  K+  A   Y EM++ G   +    N+     C+     ++ L
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-----ENCL 371

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALC-SNMVSEALANLHHMIERGYPPRAATID-V 180
            +A+Q+F+ M  +    D  TY +LI + C +  V + +     +  +G  P   T + +
Sbjct: 372 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 431

Query: 181 VQTLCHKGSVNEALCVLR----HGIPFRRISFDLIIDELNKQGMWFSACNVY 223
           V   C  G +N A  + +     G+P   +++ +++D L   G    A  ++
Sbjct: 432 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

[Close]

BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot
Match: Q9CAN6 (Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63070 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18
Identity = 70/247 (28.34%), Postives = 109/247 (44.13%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DGLCK    D+A +L N+ E  G+KP V T+N L +  C  GR  D   +L+ M + N 
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTI-EAKMMNTFTRALCRRSWKEKDL 120
            PD      L+   +K  K+  A + Y EMV S H   +    NT  +  C+        
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK-----R 376

Query: 121 LEDAHQVFEKMKDEFQVIDRSTYGLLIQAL-----CSNMVSEALANLHHMIERGYPPRAA 180
           +E+  +VF +M     V +  TY  LI        C N    A      M+  G  P   
Sbjct: 377 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN----AQMVFKQMVSDGVHPDIM 436

Query: 181 TIDV-VQTLCHKGSVNEALCVL----RHGIPFRRISFDLIIDELNKQGMWFSACNVYALA 233
           T ++ +  LC+ G+V  AL V     +  +    +++  +I+ L K G      +++   
Sbjct: 437 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 494

[Close]

BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 68/242 (28.10%), Postives = 109/242 (45.04%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           M+  CK G   +A ++ +E  +  L+P+V +FNTL NGYCK G   +G  + ++M++   
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD      L++ L K +K+  A   + EM   G      +  T      R    E DL+
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG--EIDLM 366

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCSNMVSEALANL-HHMIERGYPPRAAT-IDV 180
           ++++Q   KM  +    D   Y  L+   C N    A  N+   MI RG  P   T   +
Sbjct: 367 KESYQ---KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 426

Query: 181 VQTLCHKGSVNEALCVLR----HGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGV 233
           +   C  G V  AL + +    +GI   R+ F  ++  + K+G    A       L+ G+
Sbjct: 427 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 483

[Close]

BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-17
Identity = 65/232 (28.02%), Postives = 104/232 (44.83%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DGLCK G  D A  L NE E  G K  + T+NTL  G+C  GR  DG  +L  M +   
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           +P+      L+   +K  K+R A +  KEM+  G        N+     C+     ++ L
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK-----ENRL 389

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALC-SNMVSEALANLHHMIERGYPPRAATID-V 180
           E+A Q+ + M  +    D  T+ +LI   C +N + + L     M  RG      T + +
Sbjct: 390 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 449

Query: 181 VQTLCHKGSVNEALCVLRHGIPFR----RISFDLIIDELNKQGMWFSACNVY 223
           VQ  C  G +  A  + +  +  R     +S+ +++D L   G    A  ++
Sbjct: 450 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

[Close]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-108
Identity = 198/243 (81.48%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLL GLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRR+WKEKDLL
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+E QVIDRSTYGLLIQALCS N  SEALANLHHMI +GY PRA TIDV 
Sbjct: 370 EDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPRAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH G  +EALCVL HGI F RISFDL+I+ELN++GMWFSACNVY LALKRG+KP K
Sbjct: 430 VQALCHSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNVYGLALKRGIKPTK 489

[Close]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.0e-108
Identity = 199/243 (81.89%), Postives = 213/243 (87.65%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELL+EAE NG+KPSV TFNTLFNGYCKEGRP+DGI VL KMKQ+NC
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           TPDR    TLLHGLIKW KIR ALRTYKEMVSSGH+IE KMMNTF RALCRR+WKEKDLL
Sbjct: 310 TPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATIDV- 180
           EDAHQVFEKMK+EFQVIDRSTYGLLIQALCS N  SEALANLHHMI +GY P A TIDV 
Sbjct: 370 EDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYSPWAITIDVM 429

Query: 181 VQTLCHKGSVNEALCVLRHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGVKPRK 238
           VQ LCH GS +EALCVL HGI F RISFDLII+ELN++GMW SAC+VY LALKRG+KP K
Sbjct: 430 VQALCHSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSVYGLALKRGIKPTK 489

[Close]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.6e-103
Identity = 192/252 (76.19%), Postives = 211/252 (83.73%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDGLCKVGRSDEAMELLNEAEENGL+PSV TFNTLFNGYCKEGRP+DGI+VL KMKQ+NC
Sbjct: 243 MDGLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNC 302

Query: 61  TPDR----TLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PDR    TLLHGLIKW KIR ALRTYKEMVSSGH++E KMMNTF RALCRRSWKEKDLL
Sbjct: 303 MPDRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLL 362

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATID-V 180
           EDAHQVFEKMK+EFQVI RSTYG++I ALCS N +SEA+ANLHHMI +GY PRA TI+ V
Sbjct: 363 EDAHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVV 422

Query: 181 VQTLCHKGSVNEALCVL---------RHGIPFRRISFDLIIDELNKQGMWFSACNVYALA 238
           V+ LC +GS NEAL V+          H IPF R+S+DLIIDELNKQGMWF AC VY LA
Sbjct: 423 VEALCRRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYGLA 482

[Close]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL
Match: A0A2I4EIR4 (pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108989956 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.1e-74
Identity = 148/247 (59.92%), Postives = 181/247 (73.28%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDG CKVGRSDEAMELL+EAEE GL P+V ++NTLF GYCKEGRP++GI VL +MKQ NC
Sbjct: 279 MDGFCKVGRSDEAMELLDEAEEMGLTPNVVSYNTLFQGYCKEGRPLEGIGVLKQMKQRNC 338

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD     TLLHGL+KW KIR ALRTYKEMV  G  ++ +MMNTF R LCRRSWKEKD+L
Sbjct: 339 MPDYICYSTLLHGLLKWGKIRSALRTYKEMVGDGFEVDERMMNTFLRRLCRRSWKEKDML 398

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCS-NMVSEALANLHHMIERGYPPRAATID-V 180
           EDA+QVFEKMK  F VID STY L+IQALC+   + +AL NLH MI  G+ P   T + +
Sbjct: 399 EDAYQVFEKMKKRFYVIDLSTYSLMIQALCTGKKIEQALDNLHDMIRMGHSPPIITFNSI 458

Query: 181 VQTLCHKGSVNEALCVLR-----HGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRG 237
           ++ LC  G V+EAL VL        +P  RIS++L+I+ELN++     ACN+Y +ALKRG
Sbjct: 459 IRALCAGGRVDEALLVLALMDEGRRMP-NRISYNLLIEELNRRKWLLGACNIYGMALKRG 518

[Close]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL
Match: A0A5N6RKM0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.6e-71
Identity = 145/248 (58.47%), Postives = 176/248 (70.97%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           MDG CKVGRSDEA+ELL+EA E GL P+V T+NTLFNGYCKEGRP+ GI VL +MKQ NC
Sbjct: 217 MDGFCKVGRSDEAVELLDEAVEMGLTPNVVTYNTLFNGYCKEGRPLKGIGVLKQMKQRNC 276

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD     TLLHGL+KW KIR ALRTYKEMV  G   + +MMNT  R LC+RSWKEKDLL
Sbjct: 277 MPDYITYSTLLHGLLKWGKIRSALRTYKEMVGDGFEADERMMNTLLRGLCKRSWKEKDLL 336

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALC-SNMVSEALANLHHMIERGYPPRAATID-V 180
           E+A+Q+FEKMK+ F VID STYGL+++ALC      EAL NLH     G+ P   T + V
Sbjct: 337 ENAYQLFEKMKNGFYVIDLSTYGLMVKALCVGEKTEEALDNLHDFTRMGHSPHIITFNSV 396

Query: 181 VQTLCHKGSVNEALCVL-----RHGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRG 238
           ++ LC +G V+EAL VL        IP  RIS++L+I+E N++     ACN+Y  ALKRG
Sbjct: 397 IRALCAEGRVDEALLVLILMDEGRRIP-NRISYNLLIEECNRRKWLLGACNIYGAALKRG 456

[Close]

BLAST of CcUC10G207950 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 79/272 (29.04%), Postives = 122/272 (44.85%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DG CK+G+ DEA  +LNE   +GLKP+   FN L + +CKE R  + + +  +M +  C
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRR-SWKEKDL 120
            PD     +L+ GL + D+I+ AL   ++M+S G        NT   A  RR   KE   
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550

Query: 121 L-----------------------------EDAHQVFEKMKDEFQVIDRSTYGLLIQALC 180
           L                             + A  +FEKM  +       +  +LI  LC
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610

Query: 181 -SNMVSEALANLHHMIERGYPPRAATID-VVQTLCHKGSVNEALCVLR----HGIPFRRI 233
            S MV EA+     M+ RG  P   T + ++  LC  G + + L + R     GIP   +
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670

[Close]

BLAST of CcUC10G207950 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 6.1e-20
Identity = 62/232 (26.72%), Postives = 109/232 (46.98%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +D LCK G  D+A+ L NE E  G+K  V T+++L  G C +G+  DG  +L +M   N 
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD      L+   +K  K+  A   Y EM++ G   +    N+     C+     ++ L
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-----ENCL 371

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALC-SNMVSEALANLHHMIERGYPPRAATID-V 180
            +A+Q+F+ M  +    D  TY +LI + C +  V + +     +  +G  P   T + +
Sbjct: 372 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 431

Query: 181 VQTLCHKGSVNEALCVLR----HGIPFRRISFDLIIDELNKQGMWFSACNVY 223
           V   C  G +N A  + +     G+P   +++ +++D L   G    A  ++
Sbjct: 432 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478

[Close]

BLAST of CcUC10G207950 vs. TAIR 10
Match: AT1G63070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 70/247 (28.34%), Postives = 109/247 (44.13%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DGLCK    D+A +L N+ E  G+KP V T+N L +  C  GR  D   +L+ M + N 
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTI-EAKMMNTFTRALCRRSWKEKDL 120
            PD      L+   +K  K+  A + Y EMV S H   +    NT  +  C+        
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK-----R 376

Query: 121 LEDAHQVFEKMKDEFQVIDRSTYGLLIQAL-----CSNMVSEALANLHHMIERGYPPRAA 180
           +E+  +VF +M     V +  TY  LI        C N    A      M+  G  P   
Sbjct: 377 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN----AQMVFKQMVSDGVHPDIM 436

Query: 181 TIDV-VQTLCHKGSVNEALCVL----RHGIPFRRISFDLIIDELNKQGMWFSACNVYALA 233
           T ++ +  LC+ G+V  AL V     +  +    +++  +I+ L K G      +++   
Sbjct: 437 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 494

[Close]

BLAST of CcUC10G207950 vs. TAIR 10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 68/242 (28.10%), Postives = 109/242 (45.04%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           M+  CK G   +A ++ +E  +  L+P+V +FNTL NGYCK G   +G  + ++M++   
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
            PD      L++ L K +K+  A   + EM   G      +  T      R    E DL+
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG--EIDLM 366

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALCSNMVSEALANL-HHMIERGYPPRAAT-IDV 180
           ++++Q   KM  +    D   Y  L+   C N    A  N+   MI RG  P   T   +
Sbjct: 367 KESYQ---KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 426

Query: 181 VQTLCHKGSVNEALCVLR----HGIPFRRISFDLIIDELNKQGMWFSACNVYALALKRGV 233
           +   C  G V  AL + +    +GI   R+ F  ++  + K+G    A       L+ G+
Sbjct: 427 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 483

[Close]

BLAST of CcUC10G207950 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-18
Identity = 65/232 (28.02%), Postives = 104/232 (44.83%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVGTFNTLFNGYCKEGRPVDGIYVLNKMKQINC 60
           +DGLCK G  D A  L NE E  G K  + T+NTL  G+C  GR  DG  +L  M +   
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329

Query: 61  TPD----RTLLHGLIKWDKIRIALRTYKEMVSSGHTIEAKMMNTFTRALCRRSWKEKDLL 120
           +P+      L+   +K  K+R A +  KEM+  G        N+     C+     ++ L
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK-----ENRL 389

Query: 121 EDAHQVFEKMKDEFQVIDRSTYGLLIQALC-SNMVSEALANLHHMIERGYPPRAATID-V 180
           E+A Q+ + M  +    D  T+ +LI   C +N + + L     M  RG      T + +
Sbjct: 390 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 449

Query: 181 VQTLCHKGSVNEALCVLRHGIPFR----RISFDLIIDELNKQGMWFSACNVY 223
           VQ  C  G +  A  + +  +  R     +S+ +++D L   G    A  ++
Sbjct: 450 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

The following BLAST results are available for this feature:

BLAST of CcUC10G207950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904608.1	8.8e-114	87.24	pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida]	[more]
KAG7017186.1	1.5e-108	82.30	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6580429.1	3.3e-108	81.89	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022935128.1	4.2e-108	81.48	pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]	[more]
XP_023528121.1	7.2e-108	81.48	pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp...	[more]

BLAST of CcUC10G207950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMF6	4.0e-24	29.04	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q6NQ83	8.5e-19	26.72	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9CAN6	1.9e-18	28.34	Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidop...	[more]
O04491	1.6e-17	28.10	Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th...	[more]
Q9LPX2	2.1e-17	28.02	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of CcUC10G207950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9P1	2.1e-108	81.48	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1J506	6.0e-108	81.89	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A6J1DW66	7.6e-103	76.19	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]
A0A2I4EIR4	1.1e-74	59.92	pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Jug...	[more]
A0A5N6RKM0	2.6e-71	58.47	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1	[more]

BLAST of CcUC10G207950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64320.1	2.8e-25	29.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22470.1	6.1e-20	26.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63070.1	1.4e-19	28.34	pentatricopeptide (PPR) repeat-containing protein	[more]
AT1G09680.1	1.1e-18	28.10	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12775.1	1.5e-18	28.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 1..41 e-value: 2.8E-11 score: 43.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 65..90 e-value: 0.13 score: 12.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 1..29 e-value: 4.8E-6 score: 24.4 coord: 31..63 e-value: 8.2E-8 score: 30.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 28..62 score: 11.290196
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1..27 score: 10.314641
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 69..235 e-value: 3.7E-18 score: 68.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..68 e-value: 5.7E-18 score: 66.9
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..237
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G207950.1	CcUC10G207950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding