
CcUC10G207920 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAACATGGTTTTTGTTTAGCAATTAGTTTTGAATGATGGATCAAAAACTGCCACGAGGGGTTGTTGAAACAGAGGTGGTGCAGGGGAACAGGACGGGTAGTGTGTCTTATGTGGGGGAGATGAATTTCGATGCGCACATGGTTGTAATACTGGCAGCCATATTATGTGCACTCATTGGAGCGGTTGGAGTGAACTCTATTATACGGTGCGTTTTGCGGTGTGGGTATAGGTTCGGCAGGGAGAGGGCTGCTCAGGAGGCGGTAGCGGGGCTTAAGGAGCGAGAACTCACTCTGATTCCGATCGGGGTTTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGGAATTTGCCTCGCTCAGTTTGAGGAGGGCGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGTATTGATACCTGGCTCTTGTCTCACTCATCTTGCCCCAACTGCCGCCATTCCGTCAAACCTAAACAACCTGCTGCGCCGCCACCCCATGTCGTTGTGACCATGCCCTATCCCAATTATACCTTGTAGATGTAATGACTCGTTGTGGACGAGGCTTTAAAAACTATGCTGTTGCAATTTTGTGTATCTACTTCATCTGTATTCCGTGCACTACAAACATTTGAAGGCTTGCTTTTTCCTTATGATATGCATTATGCTGAGGATAACTAGGTTTACTTCCTTCAAATAAGATACTGTAATTGATGACTTGTCTACCAAGACATGCTTAAATATACCTTAGTTATCTAATCCCACCATTTTAATAGTTCACACAGCAACAACAAGTGAGAGTCGAAAAAATTGGGTCAACCATTTTAGTACATGGGGAAGGGACATTAAGATTGGGTTGAGCGGGCCGATCAGCCAAATGGGCCGATGATCCAAATGGGCCCATATTGAATGAGATTAGGTCAGTTATGATGCTTTCATTTGCTTTGCTCCGGTGCAATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCGACGCCTCCTAAAGCTTGATATAGTACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATTTTGGCCGACTGGTACGGAATCAATCTTGGCATGAGGAGTTTGAGTTTCCATTCAATTTATAGATTTGTTGATTGTTGGTTGATGTGCAGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTATCTGCTTGTGCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGCCATCCGTCCCACCTTCACTTCCTTTATTATTTGGGTTTGCCTGCTTTTACTTGTTTTATGGCTCAACAAATGTAAGTACCTTTCGGCAATGCTATTGCTAGTCGCTCTGCTTCCTCTCCTACTCTTTTCAATTCCATACATTTGTACATCTTTTACATTTACGCCACTTTTTATAACATTTCTTCTTCTTCATCTTCTTTTTTCTTGCTCATTCTATTTTTCTGCTTTATCCAAATTCATCTCCCCGTTTTTTAATTTATTATATTATTAAACCAACGATTTATTTACATGAAAAGTAGTTTCAAAACAAAATATTTTCATATTTTTTTTTTTAATGTTTTCCAACTAAACCATTATTTATATATTTTCTAACTAAAAATGATAAAATATTTTGGACAAAATGTATTTATGGTTTCTTAAATTTGAGTTTAATTGAGAAACTAGTTAGAACTGTTTTAGAAATTTAAGGGAAATGATGGATTTGTTTTTCAAATTTTTGTAACCAAATGGACGTCAAATCCAAATGTTAAGACTTTCATTTTGTCCAATAATCTTTTTAATCTTTATATATATTATATATATAAAATAATGGGAAATAAGAATAAAAAAACAAACTAGGGCAAAATGTTTTATGATAAATAGTTTTCCTCCAATCACAAATGAATTTGTTGTTTTCTCTCCATTGAATTGATTTGAAGTTTTTATTCGTTTCGATGTTAATGAATATCAGATCTTATTCCTGAAACTGAAACAAAGGAAATCGGAGGAAAAGGCCTACTTGAGCAGCAAATAA ATTAAACATGGTTTTTGTTTAGCAATTAGTTTTGAATGATGGATCAAAAACTGCCACGAGGGGTTGTTGAAACAGAGGTGGTGCAGGGGAACAGGACGGGTAGTGTGTCTTATGTGGGGGAGATGAATTTCGATGCGCACATGGTTGTAATACTGGCAGCCATATTATGTGCACTCATTGGAGCGGTTGGAGTGAACTCTATTATACGGTGCGTTTTGCGGTGTGGGTATAGGTTCGGCAGGGAGAGGGCTGCTCAGGAGGCGGTAGCGGGGCTTAAGGAGCGAGAACTCACTCTGATTCCGATCGGGGTTTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGGAATTTGCCTCGCTCAGTTTGAGGAGGGCGACAAGCTTAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGTATTGATACCTGGCTCTTGTCTCACTCATCTTGCCCCAACTGCCGCCATTCCGTCAAACCTAAACAACCTGCTGCGCCGCCACCCCATGTCGTTGTGACCATGCCCTATCCCAATTATACCTTGTAGATGTAATGACTCGTTGTGGACGAGGCTTTAAAAACTATGCTGTTGCAATTTTGTGTATCTACTTCATCTGTATTCCGTGCACTACAAACATTTGAAGGCTTGCTTTTTCCTTATGATATGCATTATGCTGAGGATAACTAGGTTTACTTCCTTCAAATAAGATACTGTAATTGATGACTTGTCTACCAAGACATGCTTAAATATACCTTAGTTATCTAATCCCACCATTTTAATAGTTCACACAGCAACAACAAGTGAGAGTCGAAAAAATTGGGTCAACCATTTTAGTACATGGGGAAGGGACATTAAGATTGGGTTGAGCGGGCCGATCAGCCAAATGGGCCGATGATCCAAATGGGCCCATATTGAATGAGATTAGGTCAGTTATGATGCTTTCATTTGCTTTGCTCCGGTGCAATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCGACGCCTCCTAAAGCTTGATATAGTACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATTTTGGCCGACTGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTATCTGCTTGTGCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGCCATCCGTCCCACCTTCACTTCCTTTATTATTTGGATCTTATTCCTGAAACTGAAACAAAGGAAATCGGAGGAAAAGGCCTACTTGAGCAGCAAATAA ATGGCGTTAGGTCATCGGCGGTCATTCAAAATCACTGTCAATGCCAAGATCTGTAACCTTTATATCAAGCTCAAGGCCACTCTGAAGCCCCCTTCCGGGAAATTCCGACGCCTCCTAAAGCTTGATATAGTACTCATCGGAGTGGATTCCAAATCCGAATCACGGATCCTCGTTCAACGCCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTGAAGAAGTATTTGGGGCGTCGCCGATCTGAAATGCCCCAATATTCATACCTACTTGTTGAATCTGAAAATCAATCTTGGCATTTTGGCCGACTGGAACTAAGGTGTGTGGCTGCTTTTGTTGTTGGATTGGGTTATCTGCTTGTGCTTGCACTCAACACACACATTGGCCTTGTTATTGCTAATGCCAATGCCATCCGTCCCACCTTCACTTCCTTTATTATTTGGATCTTATTCCTGAAACTGAAACAAAGGAAATCGGAGGAAAAGGCCTACTTGAGCAGCAAATAA MALGHRRSFKITVNAKICNLYIKLKATLKPPSGKFRRLLKLDIVLIGVDSKSESRILVQRRRTLKSRMLSFVKKYLGRRRSEMPQYSYLLVESENQSWHFGRLELRCVAAFVVGLGYLLVLALNTHIGLVIANANAIRPTFTSFIIWILFLKLKQRKSEEKAYLSSK Homology
BLAST of CcUC10G207920 vs. NCBI nr
Match: XP_038906422.1 (uncharacterized protein LOC120092221 [Benincasa hispida]) HSP 1 Score: 192.2 bits (487), Expect = 3.6e-45 Identity = 111/148 (75.00%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of CcUC10G207920 vs. NCBI nr
Match: KAE8650972.1 (hypothetical protein Csa_002588 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 2.4e-41 Identity = 105/148 (70.95%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CcUC10G207920 vs. NCBI nr
Match: XP_008442323.1 (PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]) HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35 Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0
BLAST of CcUC10G207920 vs. NCBI nr
Match: KAA0044224.1 (RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32 Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of CcUC10G207920 vs. NCBI nr
Match: XP_023540743.1 (uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31 Identity = 82/125 (65.60%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of CcUC10G207920 vs. ExPASy TrEMBL
Match: A0A0A0LCL9 (50S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_3G728110 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 105/148 (70.95%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CcUC10G207920 vs. ExPASy TrEMBL
Match: A0A1S3B4Y8 (uncharacterized protein LOC103486229 OS=Cucumis melo OX=3656 GN=LOC103486229 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 9.6e-36 Identity = 94/148 (63.51%), Postives = 113/148 (76.35%), Query Frame = 0
BLAST of CcUC10G207920 vs. ExPASy TrEMBL
Match: A0A5A7TM08 (RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005850 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 7.6e-33 Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of CcUC10G207920 vs. ExPASy TrEMBL
Match: A0A5D3DNQ2 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00230 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32 Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|