CcUC10G206950 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G206950
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RING-CH-type domain-containing protein
Location	CicolChr10: 33870198 .. 33873009 (-)
RNA-Seq Expression	CcUC10G206950
Synteny	CcUC10G206950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCCGTCAGCGGTAGTGACTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGAGGAGGGTTCGTGTTATTCTCAGTTCTTTTCGACTAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCGGCCGGAGGTTGGGGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCCGTGGAGGTTGAAAATGAAAATGGGATAACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGTAAGTCTAATCCCTGTTTTCATTTAGCAACTTTTGATGTTTCTCTCTCCCATGTATTCTGATCATATTCCTCACTCATTCTATGTTTATATTATGCTGGATAGTTCTTTGAGTTCATATTTTCAGATTATTTTCTTGCTGCTCTTCTTTGGTCTGTTCTTGTGATGAGCATCTTCTGTGTAAATTCTCATGGGGTTGGACTATACACAAATTTAAATGAGAGAGATGTATTTGAGACTTAAACCTTACCTTTTCCTTAGCTTTAAGGAAAATTCCTTAGTGTTACGAGCTTGAATGTTGCAGACATAAGGATGCTTACTTAGAGGAAAAGCTTAGACGTACAACAAGAAATAAGAGTAAAGCATAAGAAAGAGCATTTATGCATCTCCAAGCAAGTTACACTTATAACCTTCTTCCTCAGTTCCTTGGCCTGTTTCTGATGGCTTAGGAATCTCTCTCTGTTTCTCTCTACACGCCTCCTCTGTAAAGTGGATACTCCATTGCTATTCTGAACCATAATTCAGTTGAAGTGGGGAAAAGTTATATTGATCACTCAACAGATCACTTTAAGATCTCTAGTTTCCTGTATTATATGCCAAGTTTGCAGTTTTCCCAACTTGTTTAGTCCCACAATTAGCTCTTTCAGTTCCTAATTCTCTTGAACTAACATGTCCAAATGGCAGTCCATCTTGTGTCAACCAGCTGTTGGTTACCCATTATTATAAACTTGTCTCAGTACACTTCTAATCAATTTATTTCTCATCGATCCGATTCATGCCCTTGATCTAACTTTTCTTACAATTATAATAGGTTTTGTTCCGATTAGCTTGGCTCGATCCAAGTCACTACTTGAAAGCTCACTGTACTGAGCTGCTTTAGAAGCTTACTATTCCACAATGCTTATAACACTCCAGGGAAAATAATGTTGTGGAGTTTGTTGAGTCTCGTATATCTGTTGTTATATATAGCCAAAAGAAAGATATCCATGAAGAGTTTTAAAGCTGTCAAAATGTAAGGTCTGGTCATGCCATCTGTTGTGGAAACAAGATGATCAACATTTTATTTGATGTTAAAATTACTTTTCCAATATCAATAGTGAATAGAATATGTAAGTACACATATGAAAAAGGGTTATTTTTTAATCACTGAGAAACGAACAGACGATATGTTCTAGCACTTGGCCGTGAATTCCATCGATAAGTGATCTGACTCCACTAAGAAAAAGGTTCCTAAGTATTGTTCCTGGACAAAGATTCTGAGCATAGGTGATTGTATTTATAGCCATCTTTAATCAACTATTTATTGTGGGTTTCAATCAAATGTCTCATTAATTGGTGACACTGGATTGGGTTGTATTACATGATACATTCACCCCATGTGATCTTTGTGTGAAAATTCTTTAATCAAATGGATGGACCAGGGCATTTGCATGTTTGTTCCTTTGGCTACTTTATTTATTATTCCTAATCTTCTTAAATCTTATTATTAGGACATGTGAGATTTGCCATTCCATTGCACGGAACATTCTCGGACCAAACGAGGTTGAGGTAACAGAGCAATCTAACGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGACAGCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTACTCGCTTGTATGGTATTTGCTTTTGTTATATCTTGGCTGTTCCACTTCAACGTGCCCTCATAAACATATTGCCAGGAAAAAAGTAGTTTCGAAACGGTGGAAAATCCGGTTGAGGAACTTGCAGAATTTGCAGCTGCAAAAGACCCTCCAGCGAATTGCCTACAGAGTGTCCATAACTTCATATAGATTATCATCTTATACACATGTACCTGTCCCAACATTCCCCACAAAAGTTCTTTCTTTTCACTGCACTTCCATTCAATTCCAAGTTATAGAGAAATGTGGTTCAGTCGAGAACATCCTTGACGATTCTGAGCTTTCCAACGAGCATTGTCCTCATTTTTCTTCTTATTATTATTATGGGTTTTCAATATGGTTTCTCTGAATGATATCTTGTTAAAGTATTTGGTTGTTGAGCGTTGATTATGACAATGTATAGGAGAAACCCATAAACAGGCTCTCATTTTTATAGTGAAATGAAGAGGCTAATCTCCATTTTTGTAAAGCTTGGAATTTAAGAGGAATTTCTATTACTTCCTCAAATGAAGAAGAGGCATTTTCCTTGTGGACCAAAACAGGAACATGTGTCGTCCTGATGTCGGGGAAGACGAGGCGTGTATGGGATGGGACCTCTCTGTTTTCGAATGGAAACAAAATTCTGTCAGGAAAACTCATCAAACTGTGGCGTGA

mRNA sequence

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCCGTCAGCGGTAGTGACTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGAGGAGGGTTCGTGTTATTCTCAGTTCTTTTCGACTAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCGGCCGGAGGTTGGGGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCCGTGGAGGTTGAAAATGAAAATGGGATAACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGTGAGATTTGCCATTCCATTGCACGGAACATTCTCGGACCAAACGAGGTTGAGGTAACAGAGCAATCTAACGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGACAGCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTACTCGCTTGTATGGAAAAAAGTAGTTTCGAAACGGTGGAAAATCCGGTTGAGGAACTTGCAGAATTTGCAGCTGCAAAAGACCCTCCAGCGAATTGCCTACAGAACATGTGTCGTCCTGATGTCGGGGAAGACGAGGCGTGTATGGGATGGGACCTCTCTGTTTTCGAATGGAAACAAAATTCTGTCAGGAAAACTCATCAAACTGTGGCGTGA

Coding sequence (CDS)

ATGGGGCCTCAGGAAGTTTCCCAGTCCGACATTGATTTGGAACAGGGGAATCATCGGCGGTCCGTCAGCGGTAGTGACTTGAGCGCCGATTGTAGCGTCTATTTCTCTGACGCCGAGGAGGGTTCGTGTTATTCTCAGTTCTTTTCGACTAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCGGCCGGAGGTTGGGGTTGTTTCGGATTCTCGGCGAGTTTCGTCGGTTTCGGATCGTTCCGTGGAGGTTGAAAATGAAAATGGGATAACTGAAATTAAGGTGCATTCAGCTAAAGTAGAGAGGGATTGCAGGATTTGTCATTTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCATGCAAGGATGATTTGGCTGCTGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATTAAAGGAAATAAGACATGTGAGATTTGCCATTCCATTGCACGGAACATTCTCGGACCAAACGAGGTTGAGGTAACAGAGCAATCTAACGAATCCAACAACGCCTCCTCGACAACTACAGTTGCTGCATCAATTCCCTCATCAGACAGCCAAAGCTTCTGGCGTGGGCACCGGTTTCTGAATTTTTTACTCGCTTGTATGGAAAAAAGTAGTTTCGAAACGGTGGAAAATCCGGTTGAGGAACTTGCAGAATTTGCAGCTGCAAAAGACCCTCCAGCGAATTGCCTACAGAACATGTGTCGTCCTGATGTCGGGGAAGACGAGGCGTGTATGGGATGGGACCTCTCTGTTTTCGAATGGAAACAAAATTCTGTCAGGAAAACTCATCAAACTGTGGCGTGA

Protein sequence

MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRFAFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNESNNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMEKSSFETVENPVEELAEFAAAKDPPANCLQNMCRPDVGEDEACMGWDLSVFEWKQNSVRKTHQTVA

Homology

[Close]

BLAST of CcUC10G206950 vs. NCBI nr
Match: TYK25001.1 (E3 ubiquitin-protein ligase MARCH2-like [Cucumis melo var. makuwa])

HSP 1 Score: 458.8 bits (1179), Expect = 3.5e-125
Identity = 232/265 (87.55%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMEKSSFETVENPVEELAEFAAAKDPP 240
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACMEK        P+ +L  F+      
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMEK--------PINKLCAFS------ 240

Query: 241 ANCLQNMCRPDVGEDEACMGWDLSV 266
               +NM RP VGEDEAC+GWDLSV
Sbjct: 241 ----RNMFRPGVGEDEACLGWDLSV 247

[Close]

BLAST of CcUC10G206950 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida])

HSP 1 Score: 427.6 bits (1098), Expect = 8.6e-116
Identity = 212/215 (98.60%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. NCBI nr
Match: XP_004137745.1 (uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical protein Csa_002551 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 7.3e-115
Identity = 211/215 (98.14%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASSTTTVAASIPSSDSQSFW GHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. NCBI nr
Match: XP_008442485.1 (PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo])

HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-114
Identity = 210/215 (97.67%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. NCBI nr
Match: XP_022145623.1 (uncharacterized protein LOC111015024 isoform X2 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 4.6e-109
Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFV++PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVE+TEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASST  VAASIPSSDSQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. ExPASy TrEMBL
Match: A0A5D3DN10 (E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001190 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.7e-125
Identity = 232/265 (87.55%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACMEKSSFETVENPVEELAEFAAAKDPP 240
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACMEK        P+ +L  F+      
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACMEK--------PINKLCAFS------ 240

Query: 241 ANCLQNMCRPDVGEDEACMGWDLSV 266
               +NM RP VGEDEAC+GWDLSV
Sbjct: 241 ----RNMFRPGVGEDEACLGWDLSV 247

[Close]

BLAST of CcUC10G206950 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.5e-115
Identity = 211/215 (98.14%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASSTTTVAASIPSSDSQSFW GHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSQSFWCGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.0e-115
Identity = 210/215 (97.67%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFVS+PEVGVV DSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE
Sbjct: 61  AFVSQPEVGVVPDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVE+TEQSNES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVELTEQSNES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASSTTTVAASIPSSDS SFWRGHRFLNFLLACM
Sbjct: 181 NNASSTTTVAASIPSSDSHSFWRGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.2e-109
Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFV++PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVE+TEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           NNASST  VAASIPSSDSQSFWRGHRFLNFLLACM
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLACM 215

[Close]

BLAST of CcUC10G206950 vs. ExPASy TrEMBL
Match: A0A6J1CX83 (uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107
Identity = 199/213 (93.43%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MGPQEVSQSDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSCYSQFFSTNGGSYDEYRF 60
           M   EVSQSDIDLEQGNHRRSVSGSD+SADCSVYFSDA+EGSCYSQFFSTNGGSYDEYRF
Sbjct: 1   MPTPEVSQSDIDLEQGNHRRSVSGSDVSADCSVYFSDADEGSCYSQFFSTNGGSYDEYRF 60

Query: 61  AFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQE 120
           AFV++PEVGVVSDSRRVSSVSDRSVEVENENGITEIKVH AKVERDCRICHLGLESNSQE
Sbjct: 61  AFVAQPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHLAKVERDCRICHLGLESNSQE 120

Query: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNES 180
           SGIPIELGCSCKDDLAAAHKHCAETWFKI+GNKTCEICHSIARNILGP+EVE+TEQS ES
Sbjct: 121 SGIPIELGCSCKDDLAAAHKHCAETWFKIRGNKTCEICHSIARNILGPHEVELTEQSTES 180

Query: 181 NNASSTTTVAASIPSSDSQSFWRGHRFLNFLLA 214
           NNASST  VAASIPSSDSQSFWRGHRFLNFLLA
Sbjct: 181 NNASSTAAVAASIPSSDSQSFWRGHRFLNFLLA 213

[Close]

BLAST of CcUC10G206950 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 176.0 bits (445), Expect = 4.2e-44
Identity = 86/149 (57.72%), Postives = 107/149 (71.81%), Query Frame = 0


Query: 67  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIE 126
           E  +V D  R S+ S  SVE++ E G+ E  VH ++ ERDCRICH+ L++ + ESG+PIE
Sbjct: 39  EEEIVKDEERRSNASVCSVEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIE 98

Query: 127 LGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNESNNASST 186
           LGCSCK DLAAAHKHCAETWFKIKGNK CE+C SIA N++G  EVE  E  NE+N   + 
Sbjct: 99  LGCSCKADLAAAHKHCAETWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENL 158

Query: 187 TTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           T   +     + +SFW+GHRFLNFLLACM
Sbjct: 159 TLRTSGPRLVEGRSFWQGHRFLNFLLACM 187

[Close]

BLAST of CcUC10G206950 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-39
Identity = 103/214 (48.13%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 9   SDIDLEQGN----HRRSVSGSDLSADCSVYFSDAEE-GSCYSQFFSTNGGSYDEYRFAFV 68
           +DIDLEQG     HRRS+ GSD+    SVY+SD E+  SCYS F+ST GGSY EY     
Sbjct: 3   TDIDLEQGGAFGYHRRSLDGSDV----SVYYSDGEDVMSCYSYFYSTTGGSY-EYE---- 62

Query: 69  SRPEVGVVSDSRRVSSV-SDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESG 128
                     SR+VSSV S  S E+++++        +A  E+DCRICHLG+E++    G
Sbjct: 63  -------GDQSRKVSSVMSPSSSEIDDDDA-------TAPPEKDCRICHLGVETS---GG 122

Query: 129 IPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNE-VEVTEQSNESN 188
             IELGCSCKDDLA AH+ CAETWFKIKG+KTCEIC S+ARN+ G NE V  T +  E  
Sbjct: 123 GAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVARNVGGANEMVGSTMEERELR 182

Query: 189 NASSTTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
           N   T        ++  ++ W+  R +N +LACM
Sbjct: 183 NGEETAAGEGG-GATVVENRWQPQRVVNLVLACM 189

[Close]

BLAST of CcUC10G206950 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30
Identity = 86/211 (40.76%), Postives = 112/211 (53.08%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSC-YSQFFSTNGGSY-DEYRFAFVSRP 68
           S IDLE G+  R    SD+S +        +  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----D 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIE 128
           ++   +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  DLDDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 126

Query: 129 LGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSIARNILG-PNEV-EVTEQSNESNNAS 188
           LGCSCKDDL   HK CA+TWFKIKGNKTCEIC SIA+N     NE+ + T ++N  +  +
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEA 186

Query: 189 STTTVAASIPSSDSQSFWRGHRFLNFLLACM 216
             T    +   SD +   RG+RFLNFLL CM
Sbjct: 187 GNTPTMVATSDSDDRRLCRGNRFLNFLLTCM 188

[Close]

BLAST of CcUC10G206950 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22
Identity = 71/205 (34.63%), Postives = 94/205 (45.85%), Query Frame = 0


Query: 44  YSQFFSTNGGSYDEYRFAFVSRPEVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKV 103
           YS   S +G S D    + V     GV +  +++ S   +             K    K 
Sbjct: 21  YSVEISIDGDSSDWDSLSQVDLESGGVPAPEKQLHSGGKKR---RTRRRKRRKKKKKKKG 80

Query: 104 ERDCRICHLGLESNSQES-------------------------------GIPIELGCSCK 163
            RDCRICHL LE+N +                                 G+P++LGCSCK
Sbjct: 81  GRDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCK 140

Query: 164 DDLAAAHKHCAETWFKIKGNKTCEICHSIARNILGPNEVEVTEQSNESNNASSTTTVAA- 216
            DL  AH  CAETWFKIKGN TCEIC ++A N+ G       EQSN  + AS+ +  AA 
Sbjct: 141 GDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAAAG 200

[Close]

BLAST of CcUC10G206950 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17
Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 9   SDIDLEQGNHRRSVSGSDLSADCSVYFSDAEEGSC-YSQFFSTNGGSY-DEYRFAFVSRP 68
           S IDLE G+  R    SD+S +        +  SC Y   F +   S+  E+  A     
Sbjct: 7   SHIDLENGSGERQYRPSDVSGE--------DSSSCDYDYDFHSAVRSFCGEFEIA----D 66

Query: 69  EVGVVSDSRRVSSVSDRSVEVENENGITEIKVHSAKVERDCRICHLGLESNSQESGIPIE 128
           ++   +D+  V+S S R                    E+DCRICHLGLES+  E G P+ 
Sbjct: 67  DLDDETDTESVASGSIR-----------------GSPEKDCRICHLGLESSRHECGDPMV 124

Query: 129 LGCSCKDDLAAAHKHCAETWFKIKGNK 154
           LGCSCKDDL   HK CA+TWFKIKGNK
Sbjct: 127 LGCSCKDDLGYVHKQCADTWFKIKGNK 124

The following BLAST results are available for this feature:

BLAST of CcUC10G206950 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25001.1	3.5e-125	87.55	E3 ubiquitin-protein ligase MARCH2-like [Cucumis melo var. makuwa]	[more]
XP_038904640.1	8.6e-116	98.60	uncharacterized protein LOC120090971 [Benincasa hispida]	[more]
XP_004137745.1	7.3e-115	98.14	uncharacterized protein LOC101218915 [Cucumis sativus] >KGN58813.1 hypothetical ...	[more]
XP_008442485.1	1.2e-114	97.67	PREDICTED: uncharacterized protein LOC103486339 [Cucumis melo]	[more]
XP_022145623.1	4.6e-109	93.49	uncharacterized protein LOC111015024 isoform X2 [Momordica charantia]	[more]

BLAST of CcUC10G206950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G206950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN10	1.7e-125	87.55	E3 ubiquitin-protein ligase MARCH2-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LAC9	3.5e-115	98.14	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73318...	[more]
A0A1S3B5A7	6.0e-115	97.67	uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=...	[more]
A0A6J1CWG7	2.2e-109	93.49	uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CX83	1.2e-107	93.43	uncharacterized protein LOC111015024 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC10G206950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	4.2e-44	57.72	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	4.1e-39	48.13	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	2.6e-30	40.76	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.5e-22	34.63	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	1.1e-17	40.14	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 106..159 e-value: 1.1E-17 score: 74.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 107..158 e-value: 1.9E-9 score: 37.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 99..165 score: 18.613285
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 93..166 e-value: 1.1E-14 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 8..215
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 8..215
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 107..159 e-value: 9.88544E-12 score: 56.952
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G206950.1	CcUC10G206950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding