CcUC10G206500 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G206500
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor AS1
Location	CicolChr10: 33509024 .. 33509656 (-)
RNA-Seq Expression	CcUC10G206500
Synteny	CcUC10G206500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCCAATGGGGGCTTTCTTCAAACTGATTCATCCACTCCACCTCCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCGTCGGTCACCTTAACACTTTCTTCCCCTACAGTTCCAACCTACTCTCCCATCCCCTGGCTGCAGCAGGCAGAGAGAATGCCAGAAAATATACCTCTTGTGTTAGGCAATTTAGCACCTCAAATGTCAATGCCGTCGTGCGGTGGAAGCCTCTTTGCTTCCGAGCTTGTAGAATGCTGCCGAGAGCTCGACGAAGGGCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGGAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAGGAGGTTGAAGGAAAAGTGAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTAGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCAAAACATTTAAGCCTTACTAAATTTCTTGAGCACATGGGTTGCAGAACTAGAATTGCTGAGTCCAGTGGGAGGTGA

mRNA sequence

ATGGCTACTTCCAATGGGGGCTTTCTTCAAACTGATTCATCCACTCCACCTCCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCGTCGGTCACCTTAACACTTTCTTCCCCTACAGTTCCAACCTACTCTCCCATCCCCTGGCTGCAGCAGGCAGAGAGAATGCCAGAAAATATACCTCTTGTGTTAGGCAATTTAGCACCTCAAATGTCAATGCCGTCGTGCGGTGGAAGCCTCTTTGCTTCCGAGCTTGTAGAATGCTGCCGAGAGCTCGACGAAGGGCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGGAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAGGAGGTTGAAGGAAAAGTGAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTAGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCAAAACATTTAAGCCTTACTAAATTTCTTGAGCACATGGGTTGCAGAACTAGAATTGCTGAGTCCAGTGGGAGGTGA

Coding sequence (CDS)

ATGGCTACTTCCAATGGGGGCTTTCTTCAAACTGATTCATCCACTCCACCTCCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCGTCGGTCACCTTAACACTTTCTTCCCCTACAGTTCCAACCTACTCTCCCATCCCCTGGCTGCAGCAGGCAGAGAGAATGCCAGAAAATATACCTCTTGTGTTAGGCAATTTAGCACCTCAAATGTCAATGCCGTCGTGCGGTGGAAGCCTCTTTGCTTCCGAGCTTGTAGAATGCTGCCGAGAGCTCGACGAAGGGCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGGAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAGGAGGTTGAAGGAAAAGTGAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTAGAGAGGATTGAAGCTGAGTATAAGGAACAATTGGCAGGGTTGAGAAAAGATGCAGAGGCCAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCAAAACATTTAAGCCTTACTAAATTTCTTGAGCACATGGGTTGCAGAACTAGAATTGCTGAGTCCAGTGGGAGGTGA

Protein sequence

MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQAERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHLSLTKFLEHMGCRTRIAESSGR

Homology

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BLAST of CcUC10G206500 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa])

HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-106
Identity = 204/210 (97.14%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            +RMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of CcUC10G206500 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-106
Identity = 205/210 (97.62%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            ER+PEN+PLVLGNLAPQMSMPSCGGSLFASELVECCREL+EGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHLSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 210

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BLAST of CcUC10G206500 vs. NCBI nr
Match: XP_004137788.1 (transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_001688 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.3e-104
Identity = 201/210 (95.71%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            +RMPEN+PLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of CcUC10G206500 vs. NCBI nr
Match: XP_022982614.1 (transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription factor AS1-like [Cucurbita maxima])

HSP 1 Score: 384.0 bits (985), Expect = 8.1e-103
Identity = 199/210 (94.76%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            ER+PEN+PLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           A+QWAAKHLSLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

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BLAST of CcUC10G206500 vs. NCBI nr
Match: KAG6596407.1 (E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.0 bits (985), Expect = 8.1e-103
Identity = 197/210 (93.81%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            ER+PE +PLVLGN+APQM+MPSCGGSLFASELVECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

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BLAST of CcUC10G206500 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.3e-58
Identity = 132/213 (61.97%), Postives = 159/213 (74.65%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYS---PI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV   +   PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQAE-RMPENIP--LVLGNLAPQMSMPSCGG---SLFASELVECCRELDEGHRAWAA 120
           PWLQQ +    EN P  LVLG++     MPSC G   S+F SELVECCREL+EGHRAWA 
Sbjct: 216 PWLQQQQPERAENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWAD 275

Query: 121 HKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGL 180
           HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL GL
Sbjct: 276 HKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGL 335

Query: 181 RKDAEAKEQKLAEQWAAKHLSLTKFLE-HMGCR 202
           R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 RRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

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BLAST of CcUC10G206500 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-38
Identity = 94/185 (50.81%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQAERMPENIPLVLGNLAP 77
           P LPPW+S+S   SS    SPSVTL+L+S  V      P                    P
Sbjct: 163 PILPPWMSSSPSSSS----SPSVTLSLASAAVAPAPAAP--------------------P 222

Query: 78  QMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIRQKM 137
                  GG +  +EL+ECCRE++EG RAWAAH+KE AWR++R E+QLE+E+A R R+  
Sbjct: 223 PTWGGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRREAT 282

Query: 138 EEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHLSLTKFLEH 197
           EE E K++ALREE+  A+ER+EAEY+E++AGLR+DAEAKEQK+AEQWAAKH  L KFL+ 
Sbjct: 283 EEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQ 323

Query: 198 M-GCR 202
           +  CR
Sbjct: 343 VAACR 323

[Close]

BLAST of CcUC10G206500 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34
Identity = 92/199 (46.23%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSL----------RPPSPSVTLTLSSPTVP--TYSPIPWLQQ---AE 77
           P LPPWLS++ G ++           RPPSPSVTL+L+S  V     +P PW+     A+
Sbjct: 160 PVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPDRAAAD 219

Query: 78  RMPENIPLVL--GNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 137
             P   P     G  AP       G +L  +EL ECCREL+EG RAWAAH++E AWRL+R
Sbjct: 220 AAPYGFPSPSQHGGAAPPGMAVVDGQAL--AELAECCRELEEGRRAWAAHRREAAWRLKR 279

Query: 138 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 197
            E QLE E+  R R+  EE E K++ +R E+  A ER+E +++E++A LR+DA+ KE+K+
Sbjct: 280 VEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKM 339

Query: 198 AEQWAAKHLSLTKFLEHMG 200
           AEQWAAKH  + KF+E MG
Sbjct: 340 AEQWAAKHARVAKFVEQMG 356

[Close]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 204/210 (97.14%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            +RMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 204/210 (97.14%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            +RMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 201/210 (95.71%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVP Y+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            +RMPEN+PLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL
Match: A0A6J1J530 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 199/210 (94.76%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            ER+PEN+PLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           A+QWAAKHLSLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 197/210 (93.81%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYSPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVP YSPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  AERMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
            ER+PE +PLVLGN+APQM+MPSCGGSLFASELVECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAGLRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHLSLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of CcUC10G206500 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-59
Identity = 132/213 (61.97%), Postives = 159/213 (74.65%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPTYS---PI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV   +   PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWLQQAE-RMPENIP--LVLGNLAPQMSMPSCGG---SLFASELVECCRELDEGHRAWAA 120
           PWLQQ +    EN P  LVLG++     MPSC G   S+F SELVECCREL+EGHRAWA 
Sbjct: 216 PWLQQQQPERAENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWAD 275

Query: 121 HKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGL 180
           HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL GL
Sbjct: 276 HKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGL 335

Query: 181 RKDAEAKEQKLAEQWAAKHLSLTKFLE-HMGCR 202
           R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 RRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

The following BLAST results are available for this feature:

BLAST of CcUC10G206500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442545.1	2.7e-106	97.14	PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription f...	[more]
XP_038903104.1	2.7e-106	97.62	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]
XP_004137788.1	3.3e-104	95.71	transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_...	[more]
XP_022982614.1	8.1e-103	94.76	transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription f...	[more]
KAG6596407.1	8.1e-103	93.81	E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of CcUC10G206500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	6.3e-58	61.97	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	5.6e-38	50.81	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	3.7e-34	46.23	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of CcUC10G206500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN74	1.3e-106	97.14	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	1.3e-106	97.14	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A0A0LAJ9	1.6e-104	95.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1	[more]
A0A6J1J530	3.9e-103	94.76	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 S...	[more]
A0A6J1I2B9	3.9e-103	93.81	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 S...	[more]

BLAST of CcUC10G206500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	4.5e-59	61.97	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..183
None	No IPR available	COILS	Coil	Coil	coord: 120..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..47
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 18..210
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 18..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G206500.1	CcUC10G206500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus