CcUC10G204950 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATACGTGGCAAGGCTTTAAGCAACGTGGAAGAGTCCCAGCCGCCCCTTCTGGCCACAATCTCTGCCAAATTCCCACAATCGGGGAAATCTCTCCGCCGCGATTCTCCGCCATGGCGACCCGCCTTCCGAGGACGAAGCCATTCTGGTCCCTAACTTCCAGATTATCGCCCGACGACAACTCTCCGATTGCCGCTCTCATCGGATCTAGGCGAAGGTGGTCGTCATCGTCGTCTTCGTCTTCGTGTTCGTTGCCGAGTAAATCACAGAAAACGGAGAAAAAGTTAATGGACCGTCTTTCATCGGTGATAGACGCCGTCAATGACCGTAAACTCCCTCCTGAGCTTCGAGGCCAGCGTAACTCTGTCAGGTTCTCCCTGCCTTTACTTCATATCTGATTGATATATCCCTATTTTATTTTCATTATGTGTTCTTAATGCTTGGTTTTTGTTGATAATTTGTTAATTCATGAAACAGAGATTTTTGTATAAAAAATTGTTCGTACTCCATGAATTCTGCATACCTTTTCTTGTGACAAAGATTATCATTATAACCATGCTTACTTGAGATTGTTTTCCCCTTTATGTGATTTCATTGTCAGTCACTTCCATTCGAATCCTTGAAACTTAGAGGTATTAAACTATCTACCAAATATGCACCAACTAATTAGCAATACTTTTATCTCCGTCAAAAAGAAAAGAAAAAATTAGAAGGAAGAAAACCCCTTGAGTTTATAAACGTCCATTCTTTTGGTTGTAACATAGCCATGAACAACAAATCTAGTCATATTCATATTATGCATGAGACTATATGCTATCATTTCTATGTAAATTTATTATGATGAACATTTTATTTTATTGAAATTAGGGCTATCCTCACTATGATGAACATTTTATTTTGCACTATATTGAAGAACTCTTCTTTTCAGTTACTGTTGGGTTGAGTAGGTAGGATATTTTGGACAGGTCAGAAACTGATCTGATGAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGAAATTCGAGAACTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTACTAATCCTCATGCTGATCCAGCAGAAGACACATTGTACCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGGTTGAACTCAACAAAGAGATCAGGAGTAACATATCTCTATGGCGATCTTCGTTGAAGAAAGCATTTGAAAGTAGAGGCAATGGAGATAATTCAAAATGGACTGAGAGTTCAGAGGCTTTGCAAGCTCAATTGCAACACATCAATGACAAGGTTAGTTATCAGTTTCATGGCCCCTTGATAATGGAAAGTTGGTACTTAAATTCCAACCAGAAGTTGGTCAATTCAACAATTAAAGTTGGTACTTAAATTCCAACCAGAAGTTGGTCAATTCAACAATTCCAAAATGGTTGCTTGCTGGGCTTTAAGCTTTTGGGTTGGGGAATGTTTTTTTCCTTAAAACTAGAAGACTAATATTACTAGACAGTTTGATTTGGGGTTGGTCTCAAACTAGTCCGTAGATTTTAAAATTGAACATAGGAAATGCCCGATTTTGTTCTCATTAACGAGTAAAATCTAGGTACCTCACATTTTTTATAAGATAAGTAAGCTAACTCACTTGTTCTCAATTGATTTTGAGATGAAATTTCATGTTATAACCAATAACGTTTAGTTAATTGATGTTCTTACTGATTCCACAACCATTGTAAATAATGTAGTTTCCATTTGCAGGTTTTTCGATATAACTTAATTGTTCCTTTCGGGCGGCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATAAGGGAAATCGTTTCTCCTCTTTGAACTTGCATGGGTTTTGCTTTTCAGGTGAAACCAGCATTCATATCTTCACAGATAGAAAAATTACTGAAACCATAGCATTAAGAAGACAAGAAATTGTAGTGTTTTGGCGTTATACAAAATGGTACCTTTCTTAATCCTGCCGCCGACGTTTCTTTTATGACGCAGCTGAAAGTTGTTTTCAGTATATGCTAAAATCCTTTTGTATCAGATCCATACTTTGTTTATATAATATAATTGAACATTC GATACGTGGCAAGGCTTTAAGCAACGTGGAAGAGTCCCAGCCGCCCCTTCTGGCCACAATCTCTGCCAAATTCCCACAATCGGGGAAATCTCTCCGCCGCGATTCTCCGCCATGGCGACCCGCCTTCCGAGGACGAAGCCATTCTGGTCCCTAACTTCCAGATTATCGCCCGACGACAACTCTCCGATTGCCGCTCTCATCGGATCTAGGCGAAGGTGGTCGTCATCGTCGTCTTCGTCTTCGTGTTCGTTGCCGAGTAAATCACAGAAAACGGAGAAAAAGTTAATGGACCGTCTTTCATCGGTGATAGACGCCGTCAATGACCGTAAACTCCCTCCTGAGCTTCGAGGCCAGCGTAACTCTGTCAGGTCAGAAACTGATCTGATGAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGAAATTCGAGAACTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTACTAATCCTCATGCTGATCCAGCAGAAGACACATTGTACCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGGTTGAACTCAACAAAGAGATCAGGAGTAACATATCTCTATGGCGATCTTCGTTGAAGAAAGCATTTGAAAGTAGAGGCAATGGAGATAATTCAAAATGGACTGAGAGTTCAGAGGCTTTGCAAGCTCAATTGCAACACATCAATGACAAGGTTTTTCGATATAACTTAATTGTTCCTTTCGGGCGGCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATAAGGGAAATCGTTTCTCCTCTTTGAACTTGCATGGGTTTTGCTTTTCAGGTGAAACCAGCATTCATATCTTCACAGATAGAAAAATTACTGAAACCATAGCATTAAGAAGACAAGAAATTGTAGTGTTTTGGCGTTATACAAAATGGTACCTTTCTTAATCCTGCCGCCGACGTTTCTTTTATGACGCAGCTGAAAGTTGTTTTCAGTATATGCTAAAATCCTTTTGTATCAGATCCATACTTTGTTTATATAATATAATTGAACATTC GATACGTGGCAAGGCTTTAAGCAACGTGGAAGAGTCCCAGCCGCCCCTTCTGGCCACAATCTCTGCCAAATTCCCACAATCGGGGAAATCTCTCCGCCGCGATTCTCCGCCATGGCGACCCGCCTTCCGAGGACGAAGCCATTCTGGTCCCTAACTTCCAGATTATCGCCCGACGACAACTCTCCGATTGCCGCTCTCATCGGATCTAGGCGAAGGTGGTCGTCATCGTCGTCTTCGTCTTCGTGTTCGTTGCCGAGTAAATCACAGAAAACGGAGAAAAAGTTAATGGACCGTCTTTCATCGGTGATAGACGCCGTCAATGACCGTAAACTCCCTCCTGAGCTTCGAGGCCAGCGTAACTCTGTCAGGTCAGAAACTGATCTGATGAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGAAATTCGAGAACTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTACTAATCCTCATGCTGATCCAGCAGAAGACACATTGTACCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGGTTGAACTCAACAAAGAGATCAGGAGTAACATATCTCTATGGCGATCTTCGTTGAAGAAAGCATTTGAAAGTAGAGGCAATGGAGATAATTCAAAATGGACTGAGAGTTCAGAGGCTTTGCAAGCTCAATTGCAACACATCAATGACAAGGTTTTTCGATATAACTTAATTGTTCCTTTCGGGCGGCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATAA DTWQGFKQRGRVPAAPSGHNLCQIPTIGEISPPRFSAMATRLPRTKPFWSLTSRLSPDDNSPIAALIGSRRRWSSSSSSSSCSLPSKSQKTEKKLMDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLMNVVERRIWNSMEEGKFENLPGKGKPLNLSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISLWRSSLKKAFESRGNGDNSKWTESSEALQAQLQHINDKVFRYNLIVPFGRQMFGLKWEKEMDRLVE Homology
BLAST of CcUC10G204950 vs. NCBI nr
Match: XP_022941444.1 (dnaJ homolog subfamily C member 28-like [Cucurbita moschata]) HSP 1 Score: 400.6 bits (1028), Expect = 1.0e-107 Identity = 209/236 (88.56%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of CcUC10G204950 vs. NCBI nr
Match: KAG6596520.1 (DnaJ-like subfamily C member 28, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399.8 bits (1026), Expect = 1.8e-107 Identity = 207/232 (89.22%), Postives = 214/232 (92.24%), Query Frame = 0
BLAST of CcUC10G204950 vs. NCBI nr
Match: XP_004137995.3 (uncharacterized protein LOC101220350 isoform X1 [Cucumis sativus]) HSP 1 Score: 397.5 bits (1020), Expect = 8.8e-107 Identity = 214/264 (81.06%), Postives = 224/264 (84.85%), Query Frame = 0
BLAST of CcUC10G204950 vs. NCBI nr
Match: XP_023540908.1 (dnaJ homolog subfamily C member 28 [Cucurbita pepo subsp. pepo] >KAG7028056.1 DnaJ-like subfamily C member 28, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 394.8 bits (1013), Expect = 5.7e-106 Identity = 204/228 (89.47%), Postives = 211/228 (92.54%), Query Frame = 0
BLAST of CcUC10G204950 vs. NCBI nr
Match: XP_038904150.1 (dnaJ homolog subfamily C member 28 [Benincasa hispida]) HSP 1 Score: 389.8 bits (1000), Expect = 1.8e-104 Identity = 203/226 (89.82%), Postives = 210/226 (92.92%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy Swiss-Prot
Match: Q8VCE1 (DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14 Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy Swiss-Prot
Match: Q9NX36 (DnaJ homolog subfamily C member 28 OS=Homo sapiens OX=9606 GN=DNAJC28 PE=1 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy TrEMBL
Match: A0A6J1FNC7 (dnaJ homolog subfamily C member 28-like OS=Cucurbita moschata OX=3662 GN=LOC111446735 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 5.0e-108 Identity = 209/236 (88.56%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy TrEMBL
Match: A0A0A0LGF4 (DUF1992 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G746580 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 4.3e-107 Identity = 214/264 (81.06%), Postives = 224/264 (84.85%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy TrEMBL
Match: A0A1S3B761 (dnaJ homolog subfamily C member 28 OS=Cucumis melo OX=3656 GN=LOC103486543 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.5e-104 Identity = 197/224 (87.95%), Postives = 207/224 (92.41%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy TrEMBL
Match: A0A6J1KSG4 (dnaJ homolog subfamily C member 28-like OS=Cucurbita maxima OX=3661 GN=LOC111498294 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 2.6e-104 Identity = 201/227 (88.55%), Postives = 209/227 (92.07%), Query Frame = 0
BLAST of CcUC10G204950 vs. ExPASy TrEMBL
Match: A0A6J1CS21 (uncharacterized protein LOC111014234 OS=Momordica charantia OX=3673 GN=LOC111014234 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 4.9e-103 Identity = 204/270 (75.56%), Postives = 223/270 (82.59%), Query Frame = 0
BLAST of CcUC10G204950 vs. TAIR 10
Match: AT5G03560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 260.4 bits (664), Expect = 1.6e-69 Identity = 134/191 (70.16%), Postives = 157/191 (82.20%), Query Frame = 0
BLAST of CcUC10G204950 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 2.9e-07 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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