CcUC10G204600 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G204600
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	dehydration-responsive element-binding protein 1F-like
Location	CicolChr10: 31915406 .. 31916017 (+)
RNA-Seq Expression	CcUC10G204600
Synteny	CcUC10G204600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCATCTTCTAGCTCAACCAACGAACATCTTTCGCTACGAACGATGGTGAAGCGAAGGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCTATTTACAAAGGCGTTCGCCAGAGAAATGGTAAATGGGTCAGCGAGCTCCGACGACCTAACAAAAAGTCTAGCTTTTGGGTTGGAACTTTTTGTAGCTCGAAAATGGCGGCGGTGGCATACGATGTCGTTACCTTGGCCATTAGAGGTGAGTCTGCAACTCTCAATTTTCCTGAGTTGGCTCACTCTTTTCCACGAGTTATGTCGCCATCGTTGTCCATTAACGATATTCGGATGATGGCAGTTGAGGCTGCAGAGGCATTTACGTCAAGCGATATATTGACGTCTTTGTCTCCATCGTCATCGTCATCGTCATCGTTGTGTTCTTCTTTGATGTCGGAGGAGAAAGGGGTGTCGAATTTGTTTTGGGATGAGGAGGAGGTGTTTAACATGCCGACGATAATCGCCGATATGGCAGAGGGGTTGATTCTAACACCACCGGGAATGAAGAGCGAATTTGATTTAGAGGATTACGAGAACGCATTTGAGTTGTCATTATGGAACTACGAGTGA

mRNA sequence

ATGGCTTCTTCATCTTCTAGCTCAACCAACGAACATCTTTCGCTACGAACGATGGTGAAGCGAAGGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCTATTTACAAAGGCGTTCGCCAGAGAAATGGTAAATGGGTCAGCGAGCTCCGACGACCTAACAAAAAGTCTAGCTTTTGGGTTGGAACTTTTTGTAGCTCGAAAATGGCGGCGGTGGCATACGATGTCGTTACCTTGGCCATTAGAGGTGAGTCTGCAACTCTCAATTTTCCTGAGTTGGCTCACTCTTTTCCACGAGTTATGTCGCCATCGTTGTCCATTAACGATATTCGGATGATGGCAGTTGAGGCTGCAGAGGCATTTACGTCAAGCGATATATTGACGTCTTTGTCTCCATCGTCATCGTCATCGTCATCGTTGTGTTCTTCTTTGATGTCGGAGGAGAAAGGGGTGTCGAATTTGTTTTGGGATGAGGAGGAGGTGTTTAACATGCCGACGATAATCGCCGATATGGCAGAGGGGTTGATTCTAACACCACCGGGAATGAAGAGCGAATTTGATTTAGAGGATTACGAGAACGCATTTGAGTTGTCATTATGGAACTACGAGTGA

Coding sequence (CDS)

ATGGCTTCTTCATCTTCTAGCTCAACCAACGAACATCTTTCGCTACGAACGATGGTGAAGCGAAGGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCTATTTACAAAGGCGTTCGCCAGAGAAATGGTAAATGGGTCAGCGAGCTCCGACGACCTAACAAAAAGTCTAGCTTTTGGGTTGGAACTTTTTGTAGCTCGAAAATGGCGGCGGTGGCATACGATGTCGTTACCTTGGCCATTAGAGGTGAGTCTGCAACTCTCAATTTTCCTGAGTTGGCTCACTCTTTTCCACGAGTTATGTCGCCATCGTTGTCCATTAACGATATTCGGATGATGGCAGTTGAGGCTGCAGAGGCATTTACGTCAAGCGATATATTGACGTCTTTGTCTCCATCGTCATCGTCATCGTCATCGTTGTGTTCTTCTTTGATGTCGGAGGAGAAAGGGGTGTCGAATTTGTTTTGGGATGAGGAGGAGGTGTTTAACATGCCGACGATAATCGCCGATATGGCAGAGGGGTTGATTCTAACACCACCGGGAATGAAGAGCGAATTTGATTTAGAGGATTACGAGAACGCATTTGAGTTGTCATTATGGAACTACGAGTGA

Protein sequence

MASSSSSSTNEHLSLRTMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAEAFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFELSLWNYE

Homology

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BLAST of CcUC10G204600 vs. NCBI nr
Match: NP_001267604.1 (dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL03400.1 CBF3 protein [Cucumis sativus] >AMK37722.1 CRT/DRE-binding factor 3 [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M+SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES  LNFP  AHSFPRVMS S SI+DIR MA++ AE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVS-NLFWDEEEVFNMPTIIADMAEGLILT 180
            FTS DILT LS SS SS SLC SLMSEEK V  N FWDEEEVFNMP IIA MAEGLI+T
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLC-SLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKSEFDLEDYENAFELSLWNYE 204
           PPGMK EFD ED EN  ELSLW++E
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

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BLAST of CcUC10G204600 vs. NCBI nr
Match: KAE8651078.1 (hypothetical protein Csa_001557 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M+SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSF
Sbjct: 21  MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 80

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES  LNFP  AHSFPRVMS S SI+DIR MA++ AE
Sbjct: 81  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 140

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVS-NLFWDEEEVFNMPTIIADMAEGLILT 180
            FTS DILT LS SS SS SLC SLMSEEK V  N FWDEEEVFNMP IIA MAEGLI+T
Sbjct: 141 TFTSGDILTPLSLSSPSSLSLC-SLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 200

Query: 181 PPGMKSEFDLEDYENAFELSLWNYE 204
           PPGMK EFD ED EN  ELSLW++E
Sbjct: 201 PPGMKKEFDWEDSENTIELSLWSHE 224

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BLAST of CcUC10G204600 vs. NCBI nr
Match: XP_008442807.1 (PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo] >KAA0043910.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa] >TYK25227.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 5.9e-74
Identity = 157/204 (76.96%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES +LNFP  AHSFPRVMS S SINDIR MA++ AE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTP 180
            FTSSDI+  LS S SS SSLC SLMSEEK V N FWDEEEVFNMP IIA +AEGLI+TP
Sbjct: 121 TFTSSDIMMPLS-SPSSPSSLC-SLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITP 180

Query: 181 PGMKSEFDLEDYENAFELSLWNYE 204
           PGMK EFD ED EN  ELSLW++E
Sbjct: 181 PGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CcUC10G204600 vs. NCBI nr
Match: XP_038906080.1 (dehydration-responsive element-binding protein 1B-like [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-73
Identity = 155/204 (75.98%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSFW 60
           M+SSSSSSTN+HLS   +VKRRAGR+KFQETRHPI+KGVRQRNGKWVSELRRPNKKSS W
Sbjct: 1   MSSSSSSSTNDHLSPPAVVKRRAGRQKFQETRHPIFKGVRQRNGKWVSELRRPNKKSSLW 60

Query: 61  VGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAEA 120
           VGTFC+ K AAVAYDVV LAI+GESA+LNFP LA+SFPRVMS S +I+DIR MA+E A+A
Sbjct: 61  VGTFCNPKTAAVAYDVVALAIKGESASLNFPNLAYSFPRVMSSS-TIHDIRTMAIETAKA 120

Query: 121 FTSSDILTSLSP-SSSSSSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTP 180
           FTSSDILTSLSP S  SS SL  SL ++EK V N FWDE+EVFNMP IIA MAEGLILTP
Sbjct: 121 FTSSDILTSLSPLSPPSSQSLLCSLTADEKVVPNFFWDEDEVFNMPAIIAGMAEGLILTP 180

Query: 181 PGMKSEFDLEDYENAFELSLWNYE 204
           P +KSEFD ED EN  EL+LW++E
Sbjct: 181 PKIKSEFDWEDCENIIELTLWSHE 203

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BLAST of CcUC10G204600 vs. NCBI nr
Match: XP_023528801.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 154/209 (73.68%), Postives = 164/209 (78.47%), Query Frame = 0


Query: 1   MASSSSSSTNEHL--SLRT-MVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKS 60
           M SSSSSSTNEHL  S +T   KR+AGRKKFQETRHPIYKGVRQRNGKWVSELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEA 120
           +FWVGTFCS +MAAVAYDVV L I+GESA LNFP   H FPRV S S SINDIR MAVEA
Sbjct: 61  TFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AEAFTSSDILTSLSPSSSSSSSLCSSLMSEEKG-----VSNLFWDEEEVFNMPTIIADMA 180
           AEAFTSS+ L+SL     SSSSLCSSL SEEK         L  DEEEVFNMP IIADMA
Sbjct: 121 AEAFTSSNRLSSL-----SSSSLCSSLTSEEKVTPKVLTDRLVLDEEEVFNMPAIIADMA 180

Query: 181 EGLILTPPGMKSEFDLEDYENAFELSLWN 202
           EGLILTPPGMK  F+ E+YE+  ELSLWN
Sbjct: 181 EGLILTPPGMKKGFNWEEYEDTVELSLWN 204

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BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-32
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVRQRN GKWVSE+R PNKK+  W+GTF +++MAA A+DV  
Sbjct: 32  KKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAA 91

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDI-LTSLSPSSSS 139
           LA+RG SA LNF   A S  R+  P S    DI+  A EAA AF       T+ +     
Sbjct: 92  LALRGRSACLNF---ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDM 151

Query: 140 SSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFE 199
             ++  ++ + E+     + DEE +F MPT++ +MAEG++L PP ++   +  D E   +
Sbjct: 152 EETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DGEGDGD 211

Query: 200 LSLWNY 203
           +SLW+Y
Sbjct: 212 VSLWSY 213

[Close]

BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVR+RN GKWV E+R PNKK+  W+GTF +++MAA A+DV  
Sbjct: 35  KKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAA 94

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDILTSLSPSSSSS 139
           LA+RG SA LNF   A S  R+  P S    DI+  A EAA AF       +        
Sbjct: 95  LALRGRSACLNF---ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDME 154

Query: 140 SSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFEL 199
            +L  ++ + E+  +  +  +E +F MP+++A+MAEG++L  P ++   + E   +  ++
Sbjct: 155 ETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDDDDV 214

Query: 200 SLWNY 203
           SLW+Y
Sbjct: 215 SLWSY 216

[Close]

BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 79/191 (41.36%), Postives = 116/191 (60.73%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+RAGRKKF+ETRHPIY+GVRQRN GKWV E+R PNKKS  W+GTF + +MAA A+DV  
Sbjct: 38  KKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAA 97

Query: 80  LAIRGESATLNFPELAHSFPRVMSPSLSI-NDIRMMAVEAAEAFTSSDILTSLSPSSSSS 139
           LA+RG SA LNF   A S  R+  P  +   +I+  A EAA AF +         ++ + 
Sbjct: 98  LALRGRSACLNF---ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAE 157

Query: 140 SSLCSSL-----MSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYE 199
            +    +      +EE+     + D+E +  MP    +MAEG++L PP  +  ++  D++
Sbjct: 158 EAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPP--EVGWNHNDFD 217

Query: 200 NAFELSLWNYE 204
              ++SLW+++
Sbjct: 218 GVGDVSLWSFD 223

[Close]

BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-28
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVRQRN GKWV ELR PNKK+  W+GTF +++MAA A+DV  
Sbjct: 35  KKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAA 94

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDI-LTSLSPSSSS 139
           +A+RG SA LNF   A S  R+  P S    +I+  A EAA  F      +T+ +     
Sbjct: 95  IALRGRSACLNF---ADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDM 154

Query: 140 SSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFE 199
             +L  ++ + E+     + DEE +  M +++ +MAEG++L  P ++  ++  D E   +
Sbjct: 155 EETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSVQWNYNF-DVEGDDD 214

Query: 200 LSLWNY 203
           +SLW+Y
Sbjct: 215 VSLWSY 216

[Close]

BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 71/184 (38.59%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 24  GRKKFQETRHPIYKGVRQR--NGKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVTLAI 83
           G  K    RHP+Y+GVRQR  + KWVSE+R P K +  W+GTF + +MAA+AYDV  LA+
Sbjct: 3   GTSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALAL 62

Query: 84  RGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAEAFTSSDILTSLSPSSSSSSSLC 143
           +G  A LNFP    S P     S+S  DI+  A  AA AF ++     ++ ++S +S + 
Sbjct: 63  KGSQAELNFPNSVSSLP--APTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVA 122

Query: 144 SSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPG---MKSEFDLEDYENAFELS 203
               S +    N F DE+ VF+MP ++ +MAEG++L+PP      + +D + +    +  
Sbjct: 123 CMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDY- 182

[Close]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL
Match: I3WEU3 (CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.5e-75
Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M+SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES  LNFP  AHSFPRVMS S SI+DIR MA++ AE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVS-NLFWDEEEVFNMPTIIADMAEGLILT 180
            FTS DILT LS SS SS SLC SLMSEEK V  N FWDEEEVFNMP IIA MAEGLI+T
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLC-SLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKSEFDLEDYENAFELSLWNYE 204
           PPGMK EFD ED EN  ELSLW++E
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL
Match: A0A140DCV7 (CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.5e-75
Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M+SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES  LNFP  AHSFPRVMS S SI+DIR MA++ AE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVS-NLFWDEEEVFNMPTIIADMAEGLILT 180
            FTS DILT LS SS SS SLC SLMSEEK V  N FWDEEEVFNMP IIA MAEGLI+T
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLC-SLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180

Query: 181 PPGMKSEFDLEDYENAFELSLWNYE 204
           PPGMK EFD ED EN  ELSLW++E
Sbjct: 181 PPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL
Match: A0A5D3DNN2 (Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003570 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.8e-74
Identity = 157/204 (76.96%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES +LNFP  AHSFPRVMS S SINDIR MA++ AE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTP 180
            FTSSDI+  LS S SS SSLC SLMSEEK V N FWDEEEVFNMP IIA +AEGLI+TP
Sbjct: 121 TFTSSDIMMPLS-SPSSPSSLC-SLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITP 180

Query: 181 PGMKSEFDLEDYENAFELSLWNYE 204
           PGMK EFD ED EN  ELSLW++E
Sbjct: 181 PGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL
Match: A0A1S3B6L0 (dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 GN=LOC103486580 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.8e-74
Identity = 157/204 (76.96%), Postives = 170/204 (83.33%), Query Frame = 0


Query: 1   MASSSSSSTNEHLSLRTMV-KRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKSSF 60
           M SSSSSSTN+HL   T V KR+AGRKKFQETRHPIYKGVRQRNGKWV ELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAE 120
           WVGTFCS K AA+AYDVV LAI+GES +LNFP  AHSFPRVMS S SINDIR MA++ AE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 AFTSSDILTSLSPSSSSSSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTP 180
            FTSSDI+  LS S SS SSLC SLMSEEK V N FWDEEEVFNMP IIA +AEGLI+TP
Sbjct: 121 TFTSSDIMMPLS-SPSSPSSLC-SLMSEEKVVPNYFWDEEEVFNMPAIIAGIAEGLIITP 180

Query: 181 PGMKSEFDLEDYENAFELSLWNYE 204
           PGMK EFD ED EN  ELSLW++E
Sbjct: 181 PGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL
Match: A0A6J1F3A6 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111441748 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.4e-67
Identity = 152/209 (72.73%), Postives = 164/209 (78.47%), Query Frame = 0


Query: 1   MASSSSSSTNEHL--SLRT-MVKRRAGRKKFQETRHPIYKGVRQRNGKWVSELRRPNKKS 60
           M SSSSSSTNEHL  S +T   KR+AGRKKFQETRHPIYKGVRQRNGKWVSELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSSKMAAVAYDVVTLAIRGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEA 120
           +FWVGTFC+ +MAAVAYDVV L I+GESA LNFP   H FPRV S S SINDIR MAVEA
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVEA 120

Query: 121 AEAFTSSDILTSLSPSSSSSSSLCSSLMSEEKGV-----SNLFWDEEEVFNMPTIIADMA 180
           AEAFTSS+ L+SL     SSSSLCSSL SEEK +       L  DEEEVFNMP IIA MA
Sbjct: 121 AEAFTSSNRLSSL-----SSSSLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMA 180

Query: 181 EGLILTPPGMKSEFDLEDYENAFELSLWN 202
           EGLILTPPGMK  F+ E+YE+  ELSLWN
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWN 204

[Close]

BLAST of CcUC10G204600 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-33
Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVRQRN GKWVSE+R PNKK+  W+GTF +++MAA A+DV  
Sbjct: 32  KKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAA 91

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDI-LTSLSPSSSS 139
           LA+RG SA LNF   A S  R+  P S    DI+  A EAA AF       T+ +     
Sbjct: 92  LALRGRSACLNF---ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDM 151

Query: 140 SSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFE 199
             ++  ++ + E+     + DEE +F MPT++ +MAEG++L PP ++   +  D E   +
Sbjct: 152 EETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DGEGDGD 211

Query: 200 LSLWNY 203
           +SLW+Y
Sbjct: 212 VSLWSY 213

[Close]

BLAST of CcUC10G204600 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVR+RN GKWV E+R PNKK+  W+GTF +++MAA A+DV  
Sbjct: 35  KKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAA 94

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDILTSLSPSSSSS 139
           LA+RG SA LNF   A S  R+  P S    DI+  A EAA AF       +        
Sbjct: 95  LALRGRSACLNF---ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDME 154

Query: 140 SSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFEL 199
            +L  ++ + E+  +  +  +E +F MP+++A+MAEG++L  P ++   + E   +  ++
Sbjct: 155 ETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDDDDV 214

Query: 200 SLWNY 203
           SLW+Y
Sbjct: 215 SLWSY 216

[Close]

BLAST of CcUC10G204600 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 79/191 (41.36%), Postives = 116/191 (60.73%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+RAGRKKF+ETRHPIY+GVRQRN GKWV E+R PNKKS  W+GTF + +MAA A+DV  
Sbjct: 38  KKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAA 97

Query: 80  LAIRGESATLNFPELAHSFPRVMSPSLSI-NDIRMMAVEAAEAFTSSDILTSLSPSSSSS 139
           LA+RG SA LNF   A S  R+  P  +   +I+  A EAA AF +         ++ + 
Sbjct: 98  LALRGRSACLNF---ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAE 157

Query: 140 SSLCSSL-----MSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYE 199
            +    +      +EE+     + D+E +  MP    +MAEG++L PP  +  ++  D++
Sbjct: 158 EAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPP--EVGWNHNDFD 217

Query: 200 NAFELSLWNYE 204
              ++SLW+++
Sbjct: 218 GVGDVSLWSFD 223

[Close]

BLAST of CcUC10G204600 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 20  KRRAGRKKFQETRHPIYKGVRQRN-GKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVT 79
           K+ AGRKKF+ETRHPIY+GVRQRN GKWV ELR PNKK+  W+GTF +++MAA A+DV  
Sbjct: 35  KKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAA 94

Query: 80  LAIRGESATLNFPELAHSFPRVMSP-SLSINDIRMMAVEAAEAFTSSDI-LTSLSPSSSS 139
           +A+RG SA LNF   A S  R+  P S    +I+  A EAA  F      +T+ +     
Sbjct: 95  IALRGRSACLNF---ADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDM 154

Query: 140 SSSLCSSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPGMKSEFDLEDYENAFE 199
             +L  ++ + E+     + DEE +  M +++ +MAEG++L  P ++  ++  D E   +
Sbjct: 155 EETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSVQWNYNF-DVEGDDD 214

Query: 200 LSLWNY 203
           +SLW+Y
Sbjct: 215 VSLWSY 216

[Close]

BLAST of CcUC10G204600 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-27
Identity = 71/184 (38.59%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 24  GRKKFQETRHPIYKGVRQR--NGKWVSELRRPNKKSSFWVGTFCSSKMAAVAYDVVTLAI 83
           G  K    RHP+Y+GVRQR  + KWVSE+R P K +  W+GTF + +MAA+AYDV  LA+
Sbjct: 3   GTSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALAL 62

Query: 84  RGESATLNFPELAHSFPRVMSPSLSINDIRMMAVEAAEAFTSSDILTSLSPSSSSSSSLC 143
           +G  A LNFP    S P     S+S  DI+  A  AA AF ++     ++ ++S +S + 
Sbjct: 63  KGSQAELNFPNSVSSLP--APTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVA 122

Query: 144 SSLMSEEKGVSNLFWDEEEVFNMPTIIADMAEGLILTPPG---MKSEFDLEDYENAFELS 203
               S +    N F DE+ VF+MP ++ +MAEG++L+PP      + +D + +    +  
Sbjct: 123 CMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDY- 182

The following BLAST results are available for this feature:

BLAST of CcUC10G204600 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267604.1	1.5e-74	77.56	dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL034...	[more]
KAE8651078.1	1.5e-74	77.56	hypothetical protein Csa_001557 [Cucumis sativus]	[more]
XP_008442807.1	5.9e-74	76.96	PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo]...	[more]
XP_038906080.1	1.3e-73	75.98	dehydration-responsive element-binding protein 1B-like [Benincasa hispida]	[more]
XP_023528801.1	1.1e-67	73.68	dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pe...	[more]

BLAST of CcUC10G204600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93835	4.4e-32	45.70	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	2.1e-29	42.70	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	2.3e-28	41.36	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	3.0e-28	42.47	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
Q9SJR0	1.1e-25	38.59	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CcUC10G204600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I3WEU3	7.5e-75	77.56	CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1	[more]
A0A140DCV7	7.5e-75	77.56	CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
A0A5D3DNN2	2.8e-74	76.96	Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. maku...	[more]
A0A1S3B6L0	2.8e-74	76.96	dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1F3A6	4.4e-67	72.73	dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=...	[more]

BLAST of CcUC10G204600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25490.1	3.1e-33	45.70	C-repeat/DRE binding factor 1	[more]
AT4G25480.1	1.5e-30	42.70	dehydration response element B1A	[more]
AT5G51990.1	1.6e-29	41.36	C-repeat-binding factor 4	[more]
AT4G25470.1	2.1e-29	42.47	C-repeat/DRE binding factor 2	[more]
AT2G36450.1	7.5e-27	38.59	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 36..47 score: 41.21 coord: 73..93 score: 48.14
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 35..97 e-value: 1.5E-19 score: 81.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 34..83 e-value: 1.8E-8 score: 34.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 35..91 score: 16.27829
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 34..93 e-value: 1.56727E-22 score: 84.2455
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 35..92 e-value: 5.9E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31839:SF39	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B-LIKE	coord: 4..201
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 4..201
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 35..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G204600.1	CcUC10G204600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity