CcUC10G204250 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G204250
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	F-box protein CPR30-like
Location	CicolChr10: 31548274 .. 31549204 (+)
RNA-Seq Expression	CcUC10G204250
Synteny	CcUC10G204250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGCGTATTGTGACGAACAACTCTGGGGAAAAGGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTCCCACTCCATGATGACTACAAGTATTTACACTTTTTTTGGCCATTCTCATGGTTTAATCGTATTTGTGGGTGATATGATCTTTTTCTTTTCCTCTGTAATCTTACTACTAGACAATTTCGTAAACTCCCACCCTCGATTATTCTCTTCGATGAAAATCAGAATAAGCCTAAGGGCGACTATTCAAGTAGGTATTTAATTTCGAGTATCACCGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGGTTATAGTCATGCATTTTTCATATGAAGTTTCAAGTATCAGTCTCTAAGAGTGGAAATTTATGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTACTTCCGATGCCTTTATTTAACATGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGACGTCACATTTGCTCCTTCGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGTTTTTTGCCAAATTATGTTACAAGAGAGTTTAAATCAGAAAGTGCACAATAGAAGTTTAGGGATTTTGAATGGATCTGTTGTTCTATTTAATTATCCATCTCGTGGTGTGAATGAAAAAAGCTTCGATATTTGGGAGATGGAGAAGGATAAGTTTGGCACTATTTCGTGGTTAAAGCTATTTTCAATTGACCCTCATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAACTCATAGAGCTCCCAATAAAAGGTTATCCAGGATTAATAAGGAATGAAACT

mRNA sequence

ATGACAAGCGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTCCCACTCCATGATGACTACAAACAATTTCGTAAACTCCCACCCTCGATTATTCTCTTCGATGAAAATCAGAATAAGCCTAAGGGCGACTATTCAAGTAGGTATTTAATTTCGAGTATCACCGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGTCTCTAAGAGTGGAAATTTATGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTACTTCCGATGCCTTTATTTAACATGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGACGTCACATTTGCTCCTTCGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGTTTTTTGCCAAATTATGTTACAAGAGAGTTTAAATCAGAAAGTGCACAATAGAAGTTTAGGGATTTTGAATGGATCTGTTGTTCTATTTAATTATCCATCTCGTGGTGTGAATGAAAAAAGCTTCGATATTTGGGAGATGGAGAAGGATAAGTTTGGCACTATTTCGTGGTTAAAGCTATTTTCAATTGACCCTCATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAACTCATAGAGCTCCCAATAAAAGGTTATCCAGGATTAATAAGGAATGAAACT

Coding sequence (CDS)

ATGACAAGCGAATTTGTATCCTCCATCCTTAAATTTCCCCTTGATCAATCTATGTCTGTTCTCGATGTCCATTTCCCACTCCATGATGACTACAAACAATTTCGTAAACTCCCACCCTCGATTATTCTCTTCGATGAAAATCAGAATAAGCCTAAGGGCGACTATTCAAGTAGGTATTTAATTTCGAGTATCACCGGATTTGGGTATGATGCGAGATCTAGGGATTTCAAGGTGTCTCTAAGAGTGGAAATTTATGATATGAGCAAAGATAGATGGAGAGAAATTGAACCACTTATTTGTTGTAGTGTACTTCCGATGCCTTTATTTAACATGTTTCATGAAGGAAAATTTTACTGGTTGGGGACAGACGTCACATTTGCTCCTTCGTATGAAATGATACTAACATTTGACATTAGCGAAGAGGTTTTTTGCCAAATTATGTTACAAGAGAGTTTAAATCAGAAAGTGCACAATAGAAGTTTAGGGATTTTGAATGGATCTGTTGTTCTATTTAATTATCCATCTCGTGGTGTGAATGAAAAAAGCTTCGATATTTGGGAGATGGAGAAGGATAAGTTTGGCACTATTTCGTGGTTAAAGCTATTTTCAATTGACCCTCATTTTGGAATTATGTTTCCAATGTTGTTCGTGAGCTCCGATGAACTTTTAATAGAGTGTAAAGAAGGACTAATGATTTTGTACAACATTAAAACTCAACAACTCATAGAGCTCCCAATAAAAGGTTATCCAGGATTAATAAGGAATGAAACT

Protein sequence

MTSEFVSSILKFPLDQSMSVLDVHFPLHDDYKQFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKVSLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDISEEVFCQIMLQESLNQKVHNRSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTISWLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYPGLIRNET

Homology

[Close]

BLAST of CcUC10G204250 vs. NCBI nr
Match: XP_004137986.3 (F-box protein CPR1-like [Cucumis sativus] >KGN59208.2 hypothetical protein Csa_000815 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 3.6e-60
Identity = 144/317 (45.43%), Postives = 185/317 (58.36%), Query Frame = 0


Query: 2   TSEFVSSILKFPLDQSM-SVLDVHFPLHDD------------------------------ 61
           + +FV SILKFPL +S+ S+ DVHF   +D                              
Sbjct: 63  SKQFVHSILKFPLHRSLTSIQDVHFAFDEDRSVSLHDVNFSDDSAYLYMINHSHGLVCLR 122

Query: 62  ------------YKQFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFK- 121
                        +Q RKLPPSII  DE +N+P+  Y ++YL S   GF YDA+S+DFK 
Sbjct: 123 GSDDDIFLCNIATRQLRKLPPSIIYQDEMENQPEDIYVAKYLNSGTQGFCYDAKSKDFKV 182

Query: 122 --------------VSLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTD 181
                         V  RVEIYD+SKDRWREI+      +    LF+M+HEGKFYW   +
Sbjct: 183 VRVLHFLIEDCYSYVPPRVEIYDLSKDRWREIDGSCGAIIHWHSLFDMYHEGKFYWWANN 242

Query: 182 VTF----APSY--EMILTFDISEEVFCQIMLQESLNQKV--HNRSLGILNGSVVLFNYPS 241
             +       Y  ++I TFDISEEVF QI   E+L +KV    +SLGILNGS+VLF+Y  
Sbjct: 243 FKYNFEDPTKYMPQIIQTFDISEEVFGQIWYPEALRRKVKYSRQSLGILNGSIVLFDYIH 302

Query: 242 RGVNEKSFDIWEMEKDKFGTISWLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYN 253
            G N+K FDIW+MEKD+FG I WLKLF++ P   + +P+LFVSS+ELL+ECKEG +ILY+
Sbjct: 303 SGQNDKMFDIWKMEKDEFGAILWLKLFTVGPISKVEYPLLFVSSNELLMECKEGELILYD 362

[Close]

BLAST of CcUC10G204250 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-57
Identity = 138/293 (47.10%), Postives = 176/293 (60.07%), Query Frame = 0


Query: 4   EFVSSILKFPL--DQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S LK PL  D+S+SV D+  P  +D+                             +
Sbjct: 71  ENIFSFLKLPLSIDRSVSVSDLDLPFDEDFRFFEIHGHSHGLLCLTDLRKDIFLCNPSTR 130

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV-------------- 123
           +F KLPPSI+L  E   +P G  SS    ++  GFGYD++SRDFKV              
Sbjct: 131 EFHKLPPSILLLTEPPAEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVDFVEGPGYFH 190

Query: 124 SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDI 183
             RVEIYD+SKDRWREIE  +C  V   P F M+HEG +YW           E+I TFD+
Sbjct: 191 PPRVEIYDLSKDRWREIETPVCGHVFWAPCFEMYHEGTYYWWAET---EGGTEIIQTFDM 250

Query: 184 SEEVFCQIMLQESLNQKVHN-RSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTIS 243
           SEEVF +I++ ES        RSLG+LNGS+VLF+YPSRG +E+SFDIWEMEKD+ G +S
Sbjct: 251 SEEVFGRILVPESFQGTGDRYRSLGVLNGSIVLFHYPSRG-DERSFDIWEMEKDESGGVS 310

Query: 244 WLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           W KL +I P  GI  P+LFVSSDELL+E  EG +ILYNI+TQQL E+P+KG+P
Sbjct: 311 WSKLLTIGPVSGIEKPLLFVSSDELLMEASEGQVILYNIRTQQLKEVPVKGHP 355

[Close]

BLAST of CcUC10G204250 vs. NCBI nr
Match: XP_031737581.1 (F-box/kelch-repeat protein At3g23880-like [Cucumis sativus] >KGN59212.2 hypothetical protein Csa_002052 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-57
Identity = 147/318 (46.23%), Postives = 183/318 (57.55%), Query Frame = 0


Query: 2   TSEFVSSILKFPLDQSM-SVLDVHFPLHDD------------------------------ 61
           + +FV SILKFPL +S+ S+ DVHF   +D                              
Sbjct: 63  SKQFVHSILKFPLHRSLTSIQDVHFAFDEDRSVSLHDVNFAEDSAHLRMVNHSHGLVCLR 122

Query: 62  ------------YKQFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV 121
                        +Q RKLPPSII  D  +N+P+      YL     GF YDA+S+DFKV
Sbjct: 123 GYDDDIFLCNIATRQLRKLPPSIIFQDIIENQPEDVNMRMYLDFGTEGFCYDAKSKDFKV 182

Query: 122 ----------------SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGT 181
                           S RVEIYD+SKDRWREI+   C +V    LF+M+HEGKFYW   
Sbjct: 183 VRVVRPYLIEDYDFYISPRVEIYDLSKDRWREIDASGCETVHHNSLFDMYHEGKFYWWAY 242

Query: 182 DVTF----APSY--EMILTFDISEEVFCQIMLQESLNQKVHN--RSLGILNGSVVLFNYP 241
           + TF       Y  E+I TFDISEEVF QI   E++ +KV +  +SL ILNGS+VL +Y 
Sbjct: 243 NFTFNFEDPTKYMPEIIQTFDISEEVFGQIWYPETMRRKVKSSRQSLEILNGSLVLIDYY 302

Query: 242 SRGVNEKSFDIWEMEKDKFGTISWLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILY 253
            R  NEKSFDIW+MEKD+FG I WLKL +I P   I +P+LFVSS+ELL+ECKEG +ILY
Sbjct: 303 GR--NEKSFDIWKMEKDEFGAILWLKLLTIGPISKIEYPLLFVSSNELLMECKEGELILY 362

[Close]

BLAST of CcUC10G204250 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 3.7e-57
Identity = 138/293 (47.10%), Postives = 171/293 (58.36%), Query Frame = 0


Query: 4   EFVSSILKF--PLDQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S LKF  PLD S+ V DV  P  +D+                             +
Sbjct: 71  ENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPATR 130

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV-------------- 123
           +FRKLPPSI+L  E   +P G  SS    ++  GFGYD++SRDFKV              
Sbjct: 131 EFRKLPPSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 190

Query: 124 SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDI 183
             RVEIYD+SKDRWREIE  IC  V   P F M+HEG +YW           E+I +FD+
Sbjct: 191 PPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADT---NEGVEIIQSFDM 250

Query: 184 SEEVFCQIMLQESLNQKVHN-RSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTIS 243
           SEEVF QI + ES  +K    RSLG+LNGS+VLF YPSRG +E+ FDIW MEKD+FG +S
Sbjct: 251 SEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRG-DEREFDIWGMEKDEFGGVS 310

Query: 244 WLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           W KL  I P  GI  P++FVS DELL+E  EG ++LYN +TQQL ELPI G+P
Sbjct: 311 WSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVLYNARTQQLKELPINGHP 355

[Close]

BLAST of CcUC10G204250 vs. NCBI nr
Match: XP_023526117.1 (F-box protein CPR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-55
Identity = 136/294 (46.26%), Postives = 174/294 (59.18%), Query Frame = 0


Query: 4   EFVSSILKF--PLDQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S LKF  PLD S+ V DV  P  +D+                             +
Sbjct: 71  ENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPATR 130

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKVSL------------ 123
           +FRKLPPSI+L  +   +P G  SS    ++  GFGYD++SRDFKV              
Sbjct: 131 EFRKLPPSILLLTKPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 190

Query: 124 --RVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFY-WLGTDVTFAPSYEMILTFD 183
             RVEIYD+SKDRWREIE  IC  V   P F M+HEG +Y W  TD       E+I +FD
Sbjct: 191 LPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTD----EGVEIIQSFD 250

Query: 184 ISEEVFCQIMLQESLNQKVHN-RSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTI 243
           ++EEVF +I + ES   K    RS+G+LNGS+VLF+YPSRG +E+ FDIWE+ KD+FG +
Sbjct: 251 MTEEVFRRISVPESFEGKRERYRSMGVLNGSIVLFHYPSRG-DEREFDIWEIVKDEFGGV 310

Query: 244 SWLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           SW KL +I P  GI  P++FVSSDELL+E  EG M+LYN +TQQ  ELPI G+P
Sbjct: 311 SWSKLLTIGPLGGIEKPLVFVSSDELLMEANEGRMVLYNARTQQWKELPINGHP 355

[Close]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.8e-57
Identity = 138/293 (47.10%), Postives = 171/293 (58.36%), Query Frame = 0


Query: 4   EFVSSILKF--PLDQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S LKF  PLD S+ V DV  P  +D+                             +
Sbjct: 71  ENIFSFLKFPLPLDGSVPVYDVDLPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPATR 130

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV-------------- 123
           +FRKLPPSI+L  E   +P G  SS    ++  GFGYD++SRDFKV              
Sbjct: 131 EFRKLPPSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSRDFKVVRVVNFVEGPGYFH 190

Query: 124 SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDI 183
             RVEIYD+SKDRWREIE  IC  V   P F M+HEG +YW           E+I +FD+
Sbjct: 191 PPRVEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADT---NEGVEIIQSFDM 250

Query: 184 SEEVFCQIMLQESLNQKVHN-RSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTIS 243
           SEEVF QI + ES  +K    RSLG+LNGS+VLF YPSRG +E+ FDIW MEKD+FG +S
Sbjct: 251 SEEVFGQISMPESFEEKREKYRSLGVLNGSIVLFRYPSRG-DEREFDIWGMEKDEFGGVS 310

Query: 244 WLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           W KL  I P  GI  P++FVS DELL+E  EG ++LYN +TQQL ELPI G+P
Sbjct: 311 WSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVLYNARTQQLKELPINGHP 355

[Close]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 9.8e-56
Identity = 136/294 (46.26%), Postives = 175/294 (59.52%), Query Frame = 0


Query: 4   EFVSSILKF--PLDQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S LKF  PLD S+ V DV +P  +D+                             +
Sbjct: 71  ENIFSFLKFPLPLDGSVPVFDVDWPFDEDFRYFEIRGHSHGLLCLTDLRRDIFLCNPATR 130

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV-------------- 123
           +FRKLP SI+L  E   +P G  SS    ++  GFGYD++S+DFKV              
Sbjct: 131 EFRKLPQSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSKDFKVVRVVNFVEGPGYFH 190

Query: 124 SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFY-WLGTDVTFAPSYEMILTFD 183
             R EIYD+SKDRWREIE  IC  V   P F M+HEG +Y W  TD       E+I +FD
Sbjct: 191 PPRAEIYDLSKDRWREIETPICGHVFWAPSFEMYHEGTYYWWADTD----DKEEIIQSFD 250

Query: 184 ISEEVFCQIMLQESL-NQKVHNRSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTI 243
           +SEEVF +I + ES   ++   RS+GILNGS+VLF+YPSRG +E+ FDIW MEKD+FG +
Sbjct: 251 MSEEVFRRIPVPESFEGERERYRSMGILNGSIVLFHYPSRG-DEREFDIWGMEKDEFGGV 310

Query: 244 SWLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           SW KL +I P  GI  P++FVSSDELL+E  EG ++LYN + QQL ELPIKG+P
Sbjct: 311 SWSKLLTIGPLRGIEKPLVFVSSDELLMEANEGQIVLYNARIQQLKELPIKGHP 355

[Close]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL
Match: A0A6J1F5F2 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442473 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 6.0e-53
Identity = 131/293 (44.71%), Postives = 170/293 (58.02%), Query Frame = 0


Query: 4   EFVSSILKFPL--DQSMSVLDVHFPLHDDY-----------------------------K 63
           E + S L FPL  D S+ V DV  P  +D                              +
Sbjct: 72  ENIFSFLNFPLPFDGSVPVYDVDLPSDEDLRYSQICGHSHGLLCLTDLGTDIFLCNPATR 131

Query: 64  QFRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV-------------- 123
           +F+KLP SI+L  E   +P G  SS    ++  GFGYD++S+DFKV              
Sbjct: 132 EFQKLPRSILLLTEPPTEPDGYDSS----TNAVGFGYDSKSKDFKVVRVVDFMEGVCHFY 191

Query: 124 SLRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDI 183
             RVEIYD+SKDRWREIE  IC SV  MP F M+HEG +YW           E+I +FD+
Sbjct: 192 PSRVEIYDLSKDRWREIETPICGSVFWMPSFEMYHEGTYYWWAKT---GEGEEIIQSFDM 251

Query: 184 SEEVFCQIMLQESLNQKVH-NRSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTIS 243
           SEEVF +I + ES  +     RS+G+LNGS+VLF+YPS    EK F+IWEMEKD+FG +S
Sbjct: 252 SEEVFGRISMPESFKRGDRMYRSMGVLNGSIVLFHYPSE-EGEKEFEIWEMEKDEFGGVS 311

Query: 244 WLKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKGYP 251
           W KL +I P FGI  P++FV S+ELL+E  EG ++LYN +T+QL ELP+KG P
Sbjct: 312 WSKLLTIGPLFGIGKPLVFVGSNELLMESIEGQVVLYNTRTKQLRELPMKGNP 356

[Close]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL
Match: A0A6J1G4T9 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111450808 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52
Identity = 127/289 (43.94%), Postives = 173/289 (59.86%), Query Frame = 0


Query: 4   EFVSSILKFPLDQSMSVLDVHFPLHDDY------------------------------KQ 63
           E + SIL FP + SMSV+D+ FP +++Y                              ++
Sbjct: 72  EIMLSILNFPFNSSMSVIDLDFP-YEEYSKYYEINGHSHGLICFASCGVDIFLCNPATRE 131

Query: 64  FRKLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV--------------S 123
           FRKLPPSI+L     + P    + R L +SI GFGYDA+SRDFKV               
Sbjct: 132 FRKLPPSILLTTRPSSNPN---TLRSLTNSI-GFGYDAKSRDFKVVRVVYFFNDAIHFLY 191

Query: 124 LRVEIYDMSKDRWREIEPLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDIS 183
            + EIYD+SKDRWREIE  IC     MP F+++H+G +YW   D       E IL+FD+S
Sbjct: 192 FKAEIYDLSKDRWREIELPICGYSSLMPRFDLYHKGTYYWWERD---GREGENILSFDMS 251

Query: 184 EEVFCQIMLQESLNQKVHNRSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTISWL 243
           EE+F +I L ES N++ + + LG+LNGS+V+F+YP    +EK FD+WEM+KD+ G ISW 
Sbjct: 252 EELFGKISLPESFNRE-NYKILGVLNGSIVVFDYPCEVNDEKKFDLWEMKKDECGVISWS 311

Query: 244 KLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKG 249
            L +I P  GI  P+LFVSSDE+L+E  EG ++LYNIKTQ +  +P+KG
Sbjct: 312 NLLTIGPISGIHKPLLFVSSDEVLMEDNEGQVVLYNIKTQLMSVVPLKG 351

[Close]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL
Match: A0A5A7TRC3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003120 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 128/290 (44.14%), Postives = 168/290 (57.93%), Query Frame = 0


Query: 4   EFVSSILKFPLDQSMSVLDVHFPLH---------------------DD-------YKQFR 63
           E V SILKF  D+S+S+++++ P                       DD        KQ R
Sbjct: 66  ELVFSILKFSFDRSLSIMNINLPFQEIDPLLEICGHSHGLVCLTDCDDAFLVNPMTKQSR 125

Query: 64  KLPPSIILFDENQNKPKGDYSSRYLISSITGFGYDARSRDFKV----------------S 123
           KLPPSI++F      P   YS   +  SI GFGYDA+S DFKV                 
Sbjct: 126 KLPPSILIFRTGSYDP---YSYSAVPFSI-GFGYDAKSNDFKVVRIVSFRGYSTMVMCPH 185

Query: 124 LRVEIYDMSKDRWREIE-PLICCSVLPMPLFNMFHEGKFYWLGTDVTFAPSYEMILTFDI 183
           +RVEIYD+SKD+WREIE P  C      P F+M+HEG FY+ G   +     + I+TFD+
Sbjct: 186 IRVEIYDLSKDKWREIEAPPFCGDANCTPHFDMYHEGTFYFWGHGESSIFEADHIVTFDM 245

Query: 184 SEEVFCQIMLQESLNQKVHNRSLGILNGSVVLFNYPSRGVNEKSFDIWEMEKDKFGTISW 243
           S+EVF +I + ES + K H  SLG+LN S+VLF YP    NEK+ DIWEMEK++   +SW
Sbjct: 246 SQEVFSKISVPESYDDKKHKTSLGVLNRSMVLFVYPFES-NEKNIDIWEMEKNESSVVSW 305

Query: 244 LKLFSIDPHFGIMFPMLFVSSDELLIECKEGLMILYNIKTQQLIELPIKG 249
            KL +IDP  GI  P+LFVSS+ELL+E  EG +I+YN KT +  +LPI+G
Sbjct: 306 SKLLTIDPTLGIEHPLLFVSSEELLMESSEGHVIMYNTKTHRFKKLPIEG 350

The following BLAST results are available for this feature:

BLAST of CcUC10G204250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137986.3	3.6e-60	45.43	F-box protein CPR1-like [Cucumis sativus] >KGN59208.2 hypothetical protein Csa_0...	[more]
XP_038906036.1	1.3e-57	47.10	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_031737581.1	2.2e-57	46.23	F-box/kelch-repeat protein At3g23880-like [Cucumis sativus] >KGN59212.2 hypothet...	[more]
XP_022935692.1	3.7e-57	47.10	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_023526117.1	1.2e-55	46.26	F-box protein CPR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC10G204250 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G204250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6B1	1.8e-57	47.10	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A6J1J6Y5	9.8e-56	46.26	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]
A0A6J1F5F2	6.0e-53	44.71	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442473 PE=4 SV=1	[more]
A0A6J1G4T9	2.3e-52	43.94	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111450808 PE=4 SV=1	[more]
A0A5A7TRC3	2.5e-51	44.14	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CcUC10G204250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 63..237 e-value: 5.3E-16 score: 56.6
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 114..238 e-value: 7.6E-6 score: 25.9
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 76..250
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 76..250
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 81..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G204250.1	CcUC10G204250.1	mRNA