CcUC10G204030 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G204030
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 31389623 .. 31390461 (-)
RNA-Seq Expression	CcUC10G204030
Synteny	CcUC10G204030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTTCCATCCATGTCCTCTACTTGCAAATTCACTTCCCTCACTTGCAAATTCCCTCCCTCCCATCCTCCGCACGTCACTGCAATCCCGCACTTCACGCACTCCGCCGCCGTTCCTCTCTCACCGCCTAACACGGTCGCGAATTGCACGTGCACCTCACCGCTCAGCCAGTGCCGCTGCACGCTCACCGGTTGGTAACTCGACAGATTCATCGCCCGCCGTCCAGCGGCGTCGATCATGATCCAGCTTAAACTCAAATTCTCCGCAAGTTCCCGGCAAGTATTTCCGCCGCCGATTGGAAACTTAATCGGCGTTGGAACTACATCCTTAGGATCGAGCATATCGATTCGAAACGGCGAGCAACGGAACCATCCGGAGACGGTCTCTGTCTCGACGACTTTGCTGAAAATCATCTCTCCGCGGTAATAGATATCAACGGCGGAGATCAATTCCGGCGGAAGGTGGCGACGGCGCCGACGATGGCTGTAGGTCGCCGGCGACGGAGGAGAAGAGGTGGAAGTTTCGGAATTATAAGAGATGCAAGGGAAGGAATCGGAGAAGAAGGACCGAGGACCGTCGGGAAATTCCGAAATCAAAGCGTCGAGGCGCTGCGTCGCCGTCGACGGCCACGTGGAGTGACAGATATCCCCCCAGAGGCTTGGCTCGGCGGTGAGGCGGTGAAGTTGCGATGAAGTGCAGGCGGCGGCGGCGAGGGCCGGTCCGTCGAGACGCGTCAAGATGTGAGTTCGGAGAATATCTGGATGGATGTCTGAAATAGAGGTGGTGCCGCTGTCACCGGCGGCGGAGGAGAATGCCGACGAGGAAAATGTCCGATCGGT

mRNA sequence

AATGTTCCATCCATGTCCTCTACTTGCAAATTCACTTCCCTCACTTGCAAATTCCCTCCCTCCCATCCTCCGCACGTCACTGCAATCCCGCACTTCACGCACTCCGCCGCCGTTCCTCTCTCACCGCCTAACACGGTCGCGAATTGCACGTGCACCTCACCGCTCAGCCAGTGCCGCTGCACGCTCACCGGTTGGTAACTCGACAGATTCATCGCCCGCCTTCCCGGCAAGTATTTCCGCCGCCGATTGGAAACTTAATCGGCGTTGGAACTACATCCTTAGGATCGAGCATATCGATTCGAAACGGCGAGCAACGGAACCATCCGGAGACGGTCTCTGTCTCGACGACTTTGCTGAAAATCATCTCTCCGCGGTAATAGATATCAACGGCGGAGATCAATTCCGGCGGAAGGTGGCGACGGCGCCGACGATGGCTGTAGGTCGCCGGCGACGGAGGAGAAGAGGTGGAAGTTTCGGAATTATAAGAGATGCAAGGGAAGGAATCGGAGAAGAAGGACCGAGGACCGTCGGGAAATTCCGAAATCAAAGCGTCGAGGCGCTGCGTCGCCGTCGACGGCCACGTGGAGTGACAGATATCCCCCCAGAGGCTTGGCTCGGCGGTGAGGCGGCGGCGGCGGCGAGGGCCGGTCCGTCGAGACGCGTCAAGATAGGTGGTGCCGCTGTCACCGGCGGCGGAGGAGAATGCCGACGAGGAAAATGTCCGATCGGT

Coding sequence (CDS)

ATGTTCCATCCATGTCCTCTACTTGCAAATTCACTTCCCTCACTTGCAAATTCCCTCCCTCCCATCCTCCGCACGTCACTGCAATCCCGCACTTCACGCACTCCGCCGCCGTTCCTCTCTCACCGCCTAACACGGTCGCGAATTGCACGTGCACCTCACCGCTCAGCCAGTGCCGCTGCACGCTCACCGGTTGGTAACTCGACAGATTCATCGCCCGCCTTCCCGGCAAGTATTTCCGCCGCCGATTGGAAACTTAATCGGCGTTGGAACTACATCCTTAGGATCGAGCATATCGATTCGAAACGGCGAGCAACGGAACCATCCGGAGACGGTCTCTGTCTCGACGACTTTGCTGAAAATCATCTCTCCGCGGTAATAGATATCAACGGCGGAGATCAATTCCGGCGGAAGGTGGCGACGGCGCCGACGATGGCTGTAGGTCGCCGGCGACGGAGGAGAAGAGGTGGAAGTTTCGGAATTATAAGAGATGCAAGGGAAGGAATCGGAGAAGAAGGACCGAGGACCGTCGGGAAATTCCGAAATCAAAGCGTCGAGGCGCTGCGTCGCCGTCGACGGCCACGTGGAGTGACAGATATCCCCCCAGAGGCTTGGCTCGGCGGTGAGGCGGCGGCGGCGGCGAGGGCCGGTCCGTCGAGACGCGTCAAGATAGGTGGTGCCGCTGTCACCGGCGGCGGAGGAGAATGCCGACGAGGAAAATGTCCGATCGGT

Protein sequence

MFHPCPLLANSLPSLANSLPPILRTSLQSRTSRTPPPFLSHRLTRSRIARAPHRSASAAARSPVGNSTDSSPAFPASISAADWKLNRRWNYILRIEHIDSKRRATEPSGDGLCLDDFAENHLSAVIDINGGDQFRRKVATAPTMAVGRRRRRRRGGSFGIIRDAREGIGEEGPRTVGKFRNQSVEALRRRRRPRGVTDIPPEAWLGGEAAAAARAGPSRRVKIGGAAVTGGGGECRRGKCPIG

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G204030 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204030 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204030 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G204030 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G204030.1	CcUC10G204030.1	mRNA