CcUC10G202780 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G202780
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	DNA polymerase delta small subunit
Location	CicolChr10: 30046362 .. 30054693 (+)
RNA-Seq Expression	CcUC10G202780
Synteny	CcUC10G202780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGTGAAGAAAGCGGTTTCGGAGTCCGGGAGAGGGAGATGCCGAGGAGAGTGGAGAGTAGCGGTGGTAGTGATCTGCAGCATTGCTACTGTACCGAAGAGTTTACTCTTCACCATTGAATTGCGAACATGTGTCTTTTGAGATTTTTTAAGGCTAAAAAATATTTAAACCTTTCAAATTATTTTAAACTCTCTTATCCATTAATAATTTAATCTATTTAGACCTTTTGTTACATTTTGTTGGAGTGAATCAAACTTGAAAATGTTTGTAATCTGATCAATTTAGATTATTTACTAAAAATATTTCATGTATTAATCTTGAATTTGTGTAAACTTTTTCAAGTATCGGAGTTAACAAAATAATTAGAAAAATGCATCGACGATTCTCAAAGAAAATTATGATTAATAATCAAAGTTAATTCTTTTATGAGAGTCTGAGGTTTAATTGATACAATTATAAATTTTACACGAGATTTCTCCAATCGAAATATAATGGATGGTGTAAATTGATACATTTGTAAAAGTTTCAAAGTTTAAATTGATACAGTTATTAGTTTGGGATTTAAATCAATACATCTCTAAAGTTTGAGTGTATACATTGATATTATCCATTTTCTTTATTTAAACCGTTTAAGTCCCAACTTGATTTTTTAACAAACTTTTATGGGCAGTAGGGCATTAGTGTAAAATAGCAAGGCAGGTGATGTAAACAAAAGGTTATCTCACCTTAATTTGAAAAGTTTGGTTAGAAAATACACGAAACGTACAAATTTGTAAATGTAGATTTAACTAATTTATTAGACACAGAAGTGAATTTTGTGTCTAACAAAACTATAAATTTTGACTTTTGTGTCTAACCATTTATTAATTAAATAAATGTTAAGTTAGAAACCTTATTTGAAACAAAGCATAAAAAATTAAAAAAATATATTAAACATCTCTCGAAGGTTAAAATATCATATGGGTATAAAATAAAAGCTCGAGACCTAAACATGTTTGGTGTTTTGAGACTATATATAATATGCTCGAACTTTGAATTAGAAGTTGTAATGATTTTACAAGGAACGATGAGAAAGTAGAAGATGAGAAAGTAGAAAATGTGAAAGTAAAAAATGAGAGAAAAAACATAACTTTAAATTTTGGTTAAATTATACTAAATATCTTTAGTGTGAAGTGCAAATCTTCAAGATGGAATGAAGTGACATGAAAATATTACAATAAATGTGGTTAAATTATCAAGTGGAAGACAATTAAAACAAAATTATATAATATTTTATTTATTACAAGGTAAATTTTTTTTTTAAATGTTGGCTAAATTATACAAAATATTATTGAACTTTGTAATTTATGGCAAAAATACCTTTGAACTTTCATAAGTTTAAAAAATACCCCTAAACTTCCAAAATGAGTTAGAAAATACTATTGGATGAAAATCATTAAAAAAAATTAGGCTTAACTTAAAAAAATTTAATTACATAAATTACATTCACAGTAAATATATGAAAAAAATTATTAATACCTTGTTGCAAAAATAACTTAAATTTTTTTAAAACAAAAAAAAAAGTTAAAATTGCTCTTTAACGTTAATATGGTGATCAATTTGTTTGAAGTTCTCTTAAATTGAAAATAATGAATTTTAAAATAAATTATATAGATACTCTCATTTTTTCAAATAGATATTTTTTTTTTAAGTTTTCAAATTTTTAATTTACACAATTTTCTCACCAACCAAAATTTTAAGTTAAAGAATGAAATCCCATAAAATCTCACAAAATTCTAAAATCAAAATCTCCTTATAAACATTCCAAAAAAATAAATAGTCAAATAAAAAGCGTGTAATTCCAGATATTTTGTTTAATTGAGCAGTTTAAGAAAGAAAGAAAAAAAAAAAAAAAAAATCCGGCTTTACAAAATTTGGATTGGGAATAAGTTTTGGAGTCTGAAAATTGCGCCAATTTGTAGGCAGTAGAAGAAGAACTTCCTATTCTCTCCAAATTGAGGTTCGAAAGAGTAAACTTTCTCTGTTTCATTCTCTCTCTCTTCATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGTAGCTCTCAGCCTCTTCTATTTCTTACTTCGCCGTTCATTTCATTTCCTCCAAAGTTTTTGGCTTTCCCGCCTTTTTTTTCTTGCCCCTCAGCACGGCTACTCTGGAAATGCGAGGAATTTTCCCTCGCTATTTGCTCGTTTCATTTACTTTCATTTTCTTAGCAAAAGGAGGTCCATGAAGGCCGGAGAATGGGCGGGAATTGGGAACAATCTGGGCGATGATTTGTTTATTTATTGTTGTTGATGTTGTTTTTTTTTTTTTTTTTTTTTTTGGGGGCGGGGTGGGGGTGCTAAATATTGCTATTTTATGTAGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGGTATTTGCTTTCCCTTTTCATTTTATTTTTCTATTTGATACCATGAGAAGTTCTGGATGGAAGTAGATTTTGTTCTGTGGTGCATGGGCACGTCATAATATCTGGCTTTAGGGTTGTTAATCTGTTGTTTTTTCCCCCCTTGGGTGGGCTTTAGTATCTTAACACATACACAAGGTTTAGTGGTTTTATTGATGTGGTTGAACTCCATTTAGGATGGATTTGGACCAATCCTTACTTTGAGCAGCTATTTTATTTTTTCGTCTTGCATGTAATTTGTAAGTGCAACTGTTGAAGCATTGTGCTTTCAATCATAAGTTAAGGTAGAACTTAGAAGCAACTTTACGAGGAATGGGTTTTATGGGTTAGGTGAAAATTTGTCTTGAAAACAATGTCTTGCAGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGGTAATACATCAAACACATATGTCAACTACTATTTACACGACTTTTCTATGGTTTTGGTGTTTTGGGATTGGACTGAGACATTTAAATGGAATGTACAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGTATGTATCACAGAGTGAAATTGAATGGAACTATCATTCCCTTTTCTCAGCTATTGAAACCTCGAGGAATTGGATAAAGTTGTGGTCAATTTTTCGAGCATGTTGATACATGTTGCACCTGTTCATCCTTTAACTTTTCTTCTAGTCTTGTACGAGTTGATCCATGTTGCATTTGTTGGGCAGCCAATGTATTGGCTTGTCTTCCCATATTGTGCGTGTAAATTATAACTCAAGTAGTTACAACTGTTTGTTTAAAAGAATAATTCGCAGTATGAAAAATGAAATCTCTCTCGCTCTCTTCTTTTGATGAATTGCATAAAGTTTTCAACTTTTTGAGCACGTTGATGCAGGATGCACCAAGTTATTCTTGAACTTTGATTTCTTTTTGTTATGCATGAATCATTCCAAGTTGAATTAATTGTAGCAGGAAATTTACCACGTCTCCATATGTTGTGCATGCAGATTAGAACTTCGAGCTGAAATATCTTTTTAATTAAAAGCACATACTGCTGTATGAACAATTTTTTTTTTTTCTTTTTCCGGTAGCACTTTAATGTATTGTCTAATATTTGTGCCAGGGATTGTCCTTGCACTGCATGGAAAAGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGTAGGATGTGATAACCTCTTTTTCCTAATTTACTGTTTCAATAATTTTATATTTGTTCAGGAGCAAAATGGATCCAGTTATAATGCAGTGAGAGGGTTAATCACATATTTGTGTTGTACTTTAATGTTATCAGTTGATGCCATATTAGTTCATTACTTCTTAAATAGTTGAGAATTCATTATTGTTATTTAGTAGTTTATGGGTAGAGCTTTCTGAGAATGTCAGCATTTTGAAGCCTTGAGGGTGTATATAAGAGCATTGCTTCACACAACAATAATTTCATTAACAAAGTGTCGGTCAATTGCAATGTACTTTACGGTTGTGGTGTATGTGAATAGAGAAACAGCCAAGGGCCATAGCTCTGAACTCAACTTTAATTGCTCCTTAGGGCCACTGGCTTTTTCTTGGATGTTAATTTCACCTTCAGATAATTGGTTAGTTCTTACTATGAAAATTGGGAGGGCTACTTCTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCACCCCCATGGGAACTTAACTTGAAGGCTATTCTTTTTTAGACGTTTTTGGAGAAAGTTCATAGGTAAATGGTGTACTTATCTGTTGTTGTTGGGGGGTAGCAACAACTGCTCTTCCAAAGATTTTAGGGCTTTTCTTTAAGAGGACTAATGTTTTAAAAAGCCCTCCCAGCCTCACCTTTTCACAAAAGAAAGCGCGCATTAGGTGTGCCCCTTTTGTGAAGTCCCAAGGCCTTAAGCCTTGGGGTTTTTTCATTATTTAAAAAAATGTAAGGTTTTTTCTTCATTATTAAAATTACTAAACCCTAAACCTAAACAGCTTTATTGTGCCTTGAGTTTTAAAAAACACTAGGAAGGACCTAAGATGGATGATTGTTACACTTGATTAATTCGACTAAGGTCTCCTTGCAGTGGAAGGTTTGAATATTGATAATCTTCCTAAGAAAAATATGACACTTGCACTTCTTTCCAAATGATTATGACGGTACATGAGGGACAGAGATGCTCTGTTGCAAAGTTTCTTATATAAGGTTCAAATGCATGCAGGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGTTTGTTTCGTCTTTATATTTTCCCTCTCTAAATGTTTGTCAGTTGCTAAAATTTTTAGATCCATTAATTGGACAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGGTAGAGGTTTCACAAACTATGCAACTTATATACCCTGTTTTGATATATTTAAATATTTTGCCAAGATCTTCTTTAACGAACGTGGTAACGATTTTGTTATTACTTGTGAGTGAAATAATTGAAAGGCCGCTCTTCTTGAACTCTTACGAGAAGCCTTGGAAAGAATAACTCCTTTTGTGGTTTATCCTGATTAACTTACTAGGGTTCTTATTTAACAGCACTAGTTAATTATTTATGTGGAGAAATTGACTACAAGATGCCATTAATGAGTTTTGGGATGACTAATCAAATGCCAACGTGACCCTGAAACATGTGTGTGTATCTGATGTTTTCTTAGGAGCATTGTTAAGGGCAGCCTATGGTAAAACTAAATCGCATAAATCATGTAGTTTTCTACTTTTGAGAGGAAAATTGCAAAAAATAACGTTGAAGAGTTTCAGTTTGCTCTTTGTTGGTCTTTGGTTGGCTGGTGGTCGTTTTCGGGTTTCTTTGGTAGTTTTGTAGTAGTTTTTGTTTTCAGTAGCTGAAGGAGGCTTGTCGTCAAAGTTGTTTAAAAGTTTATCTCTATTTGGTTGTGTTTGTTGTCGTTTGTTGTTTAAAAAGAGATAAGGATAAGGGAAAATTTAGAACTCTCCCAGTATTCAATTATTTTGTCTGCAAACTCTAGTAATGTCAGTGATGCTAGGCTTTTTGTTGATGCATGCATGATGTATTTTCTGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGGTTCTTATCCAGTTGGTTCTTTGTCCAACCTTTTATCAATTTTATTTCCGTTTATCCTTTAATCCTAATACCTGATTGTAAATTCACTATCCTTTTTGTCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGGTCTTTCTTTACAACCGAAACTCCCACTGTTCATCCCTGGTTTTGATTTGTCAATAATTTCATTTTCTTTGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTGATAGGGTAATTGACTGTTTAGTGTGAACTTGAGTAAGCCACACTTCAATTGGTAGTCCTTTGGTTTCAGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTATTCAGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTACAAGTCACGTTCTTATTTGTGTTTTTCCTTGTTTCAGTTAGTGGATATGCCATTGAAACAATCCCTTCCCTATTCAAAGCCTGCATTGGATGAGTTCTTCCAAACTTTTTGCTATAATGATATTTCATAAAAAGAAATTATTATAAAAACTTTGCAATAATATAAAACTTCCCAAAGTAGATTTATATTATTCGAGTCTTACAGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGTATATTTTCACATAAACTCTCTATATTAATTGTTATAATTTGCTTCTCCTAAAGAATAAATGAACGAGGTAATATATTGTCATGTATATGCTTTTTGAAAATGCAGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGTAATTTTCTTTTACTTCAATTTACCTTTCAATATGGTTGCTGTAATGGTAATTTCTTTTTACTTCGAGTCACCATTACCCTGTATTTACATTTCTTTACAATATCTCCCTAGTCATTACTGTTCACGTGCAACTTTGCTAGATCAAAGGTTAAAAGCATGTTGGTTATAAAGAGAATTACCAACAGTAATATGTATGTTAACATCTCCCTAGTCATTACCTTTCATCCTTTACCCAATATTTGGTCTAGTTTTTCAGTTTGGGTTGATTTCCTGTGCGGTTACACCCATAGATCAAAGTTTCATCAGCTGTCAAAAATCAAAGCATGTTGGTTATAAAGAGAATCACTATATCTTTTCCCAATGGTTATCACTTATCAGTTATCAGTAAAAACTAGAATAAAAATGCATGACATCTAATATAAGCCTCTTAGATATGCGCCATCAGGGAGAATGAGACTGTTGAATTTTTCTTGGTTCCAGAAACTTCAGTTAAAATGGAATGTTCTTTTTTTTTTTCCCCAAAATATTTATTTTTACATACTTTGGTTGTCTGAAATAATGTTGAGGTTGATAAGTGTTAATCTAATTGATGACACGTTGTGGCAAGAAGTTGCTGTGCTCAACAAACTCTGGCCCCAATTTGTTTGTTGAACTTTTTAATGTTCATGCAATCAAATCATCTACGTCATCATTTTTAGTGAAGACTTCATTTAAGTTGAGAAAGGCTATAGATTTTTCTTTCTTTTTCTAGTGTTATTTCTTGGCCCTTTTTATCCTCTGTAGCAATGTGCTTTTCCATTCTCAACTATGATTCATTCCAAAGATGATACTCTTCCTCCCTTTTACAGCTTAACTTGAGAAACCTTGAATGCCACACACTGAGTTTTGGGACTGAATTAAGCTGATTGTTAGACAAACAAATCGTGAAGGAGATCGAGAATCTGGTTTCGCATTCGGTTTATGTTGCTTTTGCAGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA

mRNA sequence

ATGGAAATTGTGAAGAAAGCGGTTTCGGAGTCCGGGAGAGGGAGATGCCGAGGAGAGTGGAGAGTAGCGGTGGTAGTGATCTGCAGCATTGCTACTGTACCGAAGAGTTTACTCTTCACCATTGAATTGCGAACATTAGAAGAAGAACTTCCTATTCTCTCCAAATTGAGGTTCGAAAGAGTAAACTTTCTCTGTTTCATTCTCTCTCTCTTCATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCACTGCATGGAAAAGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTGATAGGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTATTCAGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA

Coding sequence (CDS)

ATGGAAATTGTGAAGAAAGCGGTTTCGGAGTCCGGGAGAGGGAGATGCCGAGGAGAGTGGAGAGTAGCGGTGGTAGTGATCTGCAGCATTGCTACTGTACCGAAGAGTTTACTCTTCACCATTGAATTGCGAACATTAGAAGAAGAACTTCCTATTCTCTCCAAATTGAGGTTCGAAAGAGTAAACTTTCTCTGTTTCATTCTCTCTCTCTTCATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCACTGCATGGAAAAGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCAGCCTGATAGGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTATTCAGAAGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA

Protein sequence

MEIVKKAVSESGRGRCRGEWRVAVVVICSIATVPKSLLFTIELRTLEEELPILSKLRFERVNFLCFILSLFMEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGAEGQMVRLIAIPRFCEKGVAVVETDYLKLPASKKVKQCGL

Homology

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BLAST of CcUC10G202780 vs. NCBI nr
Match: XP_038906226.1 (DNA polymerase delta small subunit isoform X3 [Benincasa hispida])

HSP 1 Score: 737.3 bits (1902), Expect = 8.7e-209
Identity = 372/429 (86.71%), Postives = 378/429 (88.11%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDSLKNLQRKQCTYEILDEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPVCTVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           DESGRVKLSG VLLPSVYVTGIVLAL GKETCVGDFLVLDILEAGLPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YVIFVSG+SIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQHLSAKDQTKL EPLKELDILLNQ+A GLPVDIMPGSSDPANFSLPQQPLHRCL PGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSSDPANFSLPQQPLHRCLSPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           SAYNTFRSCTNPHCFELDNFR         FLGTSGQN+DDLEKYSEAKDKLEFMERTLR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFR---------FLGTSGQNIDDLEKYSEAKDKLEFMERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 467
           WRHLAPTAPNTL                                  GAEGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPR 420

[Close]

BLAST of CcUC10G202780 vs. NCBI nr
Match: XP_004136567.1 (DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical protein Csa_001594 [Cucumis sativus])

HSP 1 Score: 729.2 bits (1881), Expect = 2.4e-206
Identity = 370/429 (86.25%), Postives = 375/429 (87.41%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDSL N+ RKQCTYE+ DEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPV TVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLVKPHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           DESGRVKLSGDVLLPSVYVTGIVLALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQHLSAKDQTKL EPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           SAYNTFRSCTNPHCFELDNFR         FLGTSGQNVDDLEKYSEAKDKLEFMERTLR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFR---------FLGTSGQNVDDLEKYSEAKDKLEFMERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 467
           WRHLAPTAPNTL                                  GAEGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPR 420

[Close]

BLAST of CcUC10G202780 vs. NCBI nr
Match: KAG7017557.1 (DNA polymerase delta small subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 727.2 bits (1876), Expect = 9.0e-206
Identity = 364/429 (84.85%), Postives = 376/429 (87.65%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDS KNLQRKQC+YEILDEQYKIQKETY+GQQYSHIYF RLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCSYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPV TVL LEEGKECVIVGT YKHMKLKPTILDEYSKERS TPLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           D+SGRVKLSG VLLPSVY TGI++ALHGKETCVGDF V DILEAGLPPQIERPLI +EDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVI GNSVEIPRG+L
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQHLSAKDQTKL EPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           SAYNTFRSCTNPHCFELDNFRQVNNV LIGFLGTSGQN DDL+KYSEAKDKLEFMERTLR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRQVNNVILIGFLGTSGQNADDLDKYSEAKDKLEFMERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 467
           WRHLAPTAPNTL                                  G+EGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPR 420

[Close]

BLAST of CcUC10G202780 vs. NCBI nr
Match: XP_038906225.1 (DNA polymerase delta small subunit isoform X2 [Benincasa hispida])

HSP 1 Score: 724.5 bits (1869), Expect = 5.8e-205
Identity = 371/451 (82.26%), Postives = 378/451 (83.81%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDSLKNLQRKQCTYEILDEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPVCTVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLIS---- 251
           DESGRVKLSG VLLPSVYVTGIVLAL GKETCVGDFLVLDILEAGLPPQIERPLIS    
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISIHEG 180

Query: 252 ----------------SEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIA 311
                            EDKYVIFVSG+SIGSSISNPLQFQLLVDHITGHLGDEKEQGIA
Sbjct: 181 QRCSVAKFLIKVQMHAGEDKYVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIA 240

Query: 312 AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSS 371
           AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKL EPLKELDILLNQ+A GLPVDIMPGSS
Sbjct: 241 AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSS 300

Query: 372 DPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVD 431
           DPANFSLPQQPLHRCL PGSSAYNTFRSCTNPHCFELDNFR         FLGTSGQN+D
Sbjct: 301 DPANFSLPQQPLHRCLSPGSSAYNTFRSCTNPHCFELDNFR---------FLGTSGQNID 360

Query: 432 DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTL---------------------------- 469
           DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTL                            
Sbjct: 361 DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKF 420

[Close]

BLAST of CcUC10G202780 vs. NCBI nr
Match: XP_038906224.1 (DNA polymerase delta small subunit isoform X1 [Benincasa hispida])

HSP 1 Score: 723.8 bits (1867), Expect = 1.0e-204
Identity = 371/449 (82.63%), Postives = 377/449 (83.96%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDSLKNLQRKQCTYEILDEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPVCTVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLIS---- 251
           DESGRVKLSG VLLPSVYVTGIVLAL GKETCVGDFLVLDILEAGLPPQIERPLIS    
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISIHEG 180

Query: 252 ----------------SEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIA 311
                            EDKYVIFVSG+SIGSSISNPLQFQLLVDHITGHLGDEKEQGIA
Sbjct: 181 QRCSVAKFLIKVQMHAGEDKYVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIA 240

Query: 312 AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSS 371
           AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKL EPLKELDILLNQ+A GLPVDIMPGSS
Sbjct: 241 AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSS 300

Query: 372 DPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVD 431
           DPANFSLPQQPLHRCL PGSSAYNTFRSCTNPHCFELDNFR         FLGTSGQN+D
Sbjct: 301 DPANFSLPQQPLHRCLSPGSSAYNTFRSCTNPHCFELDNFR---------FLGTSGQNID 360

Query: 432 DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTL---------------------------- 467
           DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTL                            
Sbjct: 361 DLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKF 420

[Close]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot
Match: O48520 (DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2 SV=2)

HSP 1 Score: 595.9 bits (1535), Expect = 4.1e-169
Identity = 291/428 (67.99%), Postives = 340/428 (79.44%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDS K  +RKQ  Y  LDE+++IQKE YRGQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPVC VLGLE+GKEC+IVGT +KHMKLKP +LDEYSKERS TPLVKPHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           DESGRVKL+G  L P++YVTG+V+ALHGKET  G+F V D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           S YNTFRSCTNPH F++DN R         FLGTSGQN+DDL KYSEAK KL+F+ERTLR
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIR---------FLGTSGQNIDDLGKYSEAKSKLDFVERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 466
           WRHLAPTAPNTL                                  G+EGQ+VRLI IP+
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPK 419

[Close]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot
Match: Q9LRE5 (DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=POLD2 PE=2 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 4.7e-157
Identity = 278/421 (66.03%), Postives = 321/421 (76.25%), Query Frame = 0


Query: 80  LQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLG 139
           ++RKQ  Y  LDE+Y IQ E Y+GQQYSHIYF RLH MR +LH+LV  WKPHLPV TVLG
Sbjct: 1   MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60

Query: 140 LEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKL 199
           LEEGK+C+IVGT YKHMKLKP+ILDEYSKERSA PLVKPHNFMHPDDHL+LEDESGRV L
Sbjct: 61  LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120

Query: 200 SGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGL 259
           +G  + P+ YVTG+V+ALHGKET  G+FLV DILEAG+PPQI  P I +EDKYV+FVSGL
Sbjct: 121 AG-AIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSI-NEDKYVVFVSGL 180

Query: 260 SIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAK 319
           SIGS   NPLQFQLL+DHITGHLGDE EQ IA+ IV VV+ GNSV I     NGQ +++K
Sbjct: 181 SIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASK 240

Query: 320 DQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 379
           DQ+++ EP+KELDI+L QL A LPVD+MPGS+DPANFSLPQQPLHRCLF G++ YNTF S
Sbjct: 241 DQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSS 300

Query: 380 CTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 439
           C+NPH FELD+ R         F+GTSGQN+DDL KYS+AKDKLEF+ERTLRWRHLAPTA
Sbjct: 301 CSNPHQFELDSVR---------FIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTA 360

Query: 440 PNTLGA----------------------------------EGQMVRLIAIPRFCEKGVAV 467
           PN+LG                                   E Q VRLI IPRFC+ GVAV
Sbjct: 361 PNSLGCYPYTDKDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAV 410

[Close]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot
Match: P49005 (DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.7e-69
Identity = 155/365 (42.47%), Postives = 219/365 (60.00%), Query Frame = 0


Query: 86  TYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSK-WKPHLPVCTVLGLEEGK 145
           TY    + +++ + ++  +QY+HIY  RL  MR  L +   + W   + V  +  L+  +
Sbjct: 31  TYTNSSQPFRLGERSF-SRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPEE 90

Query: 146 ECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 205
           +C +VGT +K M L+P+IL E S+E +  P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  KCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 206 LPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSS 265
           + S  VTG VLA+ G     G FLV D   A L PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPLDT-DRFVLLVSGLGLGGG 210

Query: 266 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 325
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    S +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKK 270

Query: 326 DQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 385
            Q   +E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 386 CTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 445
            TNP+   +D  R         FLGTSGQNV D+ +YS  +D LE +E TLR RH++PTA
Sbjct: 331 VTNPYQATIDGVR---------FLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTA 383

[Close]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot
Match: O35654 (DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 4.8e-69
Identity = 155/365 (42.47%), Postives = 219/365 (60.00%), Query Frame = 0


Query: 86  TYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSK-WKPHLPVCTVLGLEEGK 145
           TY    + +++ + ++  +QY+HIY  RL  MR  L S   + W   + V  +  L+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQPGE 90

Query: 146 ECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 205
           +C +VGT +K M L+P+IL E S+E +  P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 206 LPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSS 265
           + S  VTG VLA+ G     G F V D   A L PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVLGSAKDDGRFQVEDHCFADLAPQKPVPPLDT-DRFVLLVSGLGLGGG 210

Query: 266 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 325
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    + +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKK 270

Query: 326 DQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 385
            Q   +E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 386 CTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 445
            TNP+   +D  R         FLGTSGQNV D+ +YS  +D LE +E TLR RH++PTA
Sbjct: 331 VTNPYQATIDGVR---------FLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTA 383

[Close]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot
Match: Q6AXY4 (DNA polymerase delta subunit 2 OS=Rattus norvegicus OX=10116 GN=Pold2 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-68
Identity = 155/365 (42.47%), Postives = 218/365 (59.73%), Query Frame = 0


Query: 86  TYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSK-WKPHLPVCTVLGLEEGK 145
           TY    + +++ + ++  +QY+HIY  RL  MR  L S   + W   + V  +  L+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSQVEVKKLCELQPGE 90

Query: 146 ECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVL 205
           +C +VGT +K M L+P+IL E S+E +  P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMPLQPSILREISEEHNLIPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 206 LPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSS 265
           + S  VTG VLA+ G     G F V D   A L PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVFGSVKDDGKFQVEDHCFADLAPQNPVPPLDT-DRFVLLVSGLGLGGG 210

Query: 266 ISNP-LQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRGILNGQHLSAK 325
                L  QLLVD +TG LGDE EQ  AA +  V++ GN    + +    I   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKK 270

Query: 326 DQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 385
            Q   +E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYATLQL 330

Query: 386 CTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTA 445
            TNP+   +D  R         FLGTSGQNV D+ +YS  +D LE +E TLR RH++PTA
Sbjct: 331 VTNPYQATIDGVR---------FLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTA 383

[Close]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL
Match: A0A0A0LF21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 1.1e-206
Identity = 370/429 (86.25%), Postives = 375/429 (87.41%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDSL N+ RKQCTYE+ DEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPV TVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLVKPHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           DESGRVKLSGDVLLPSVYVTGIVLALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQHLSAKDQTKL EPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           SAYNTFRSCTNPHCFELDNFR         FLGTSGQNVDDLEKYSEAKDKLEFMERTLR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFR---------FLGTSGQNVDDLEKYSEAKDKLEFMERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 467
           WRHLAPTAPNTL                                  GAEGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPR 420

[Close]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL
Match: A0A5D3DQ54 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005420 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 8.2e-205
Identity = 368/431 (85.38%), Postives = 373/431 (86.54%), Query Frame = 0


Query: 70  LFMEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWK 129
           + MEIDS KN+ RKQC YEI DEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVS WK
Sbjct: 1   MVMEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWK 60

Query: 130 PHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLV 189
           PHLPV TVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLVKPHNFMHPDDHLV
Sbjct: 61  PHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLV 120

Query: 190 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSE 249
           LEDESGRVKLSGDVLLPSVYVTGIVLALHGKET VGDFLVLDILEA LPPQIERPLISSE
Sbjct: 121 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSE 180

Query: 250 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 309
           DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG
Sbjct: 181 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 240

Query: 310 ILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 369
           ILNGQHLSAKDQTKL EPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP
Sbjct: 241 ILNGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 300

Query: 370 GSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERT 429
           GSSAYNTFRSCTNPHCFELDN R         FLGTSGQNVDDLEKYSEAKDKLEFMERT
Sbjct: 301 GSSAYNTFRSCTNPHCFELDNLR---------FLGTSGQNVDDLEKYSEAKDKLEFMERT 360

Query: 430 LRWRHLAPTAPNTL----------------------------------GAEGQMVRLIAI 467
           LRWRHLAPTAPNTL                                  GAEGQMVRLIAI
Sbjct: 361 LRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAI 420

[Close]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL
Match: A0A5A7TKC4 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00610 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 8.2e-205
Identity = 368/431 (85.38%), Postives = 373/431 (86.54%), Query Frame = 0


Query: 70  LFMEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWK 129
           + MEIDS KN+ RKQC YEI DEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVS WK
Sbjct: 1   MVMEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWK 60

Query: 130 PHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLV 189
           PHLPV TVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLVKPHNFMHPDDHLV
Sbjct: 61  PHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLV 120

Query: 190 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSE 249
           LEDESGRVKLSGDVLLPSVYVTGIVLALHGKET VGDFLVLDILEA LPPQIERPLISSE
Sbjct: 121 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSE 180

Query: 250 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 309
           DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG
Sbjct: 181 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 240

Query: 310 ILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 369
           ILNGQHLSAKDQTKL EPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP
Sbjct: 241 ILNGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 300

Query: 370 GSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERT 429
           GSSAYNTFRSCTNPHCFELDN R         FLGTSGQNVDDLEKYSEAKDKLEFMERT
Sbjct: 301 GSSAYNTFRSCTNPHCFELDNLR---------FLGTSGQNVDDLEKYSEAKDKLEFMERT 360

Query: 430 LRWRHLAPTAPNTL----------------------------------GAEGQMVRLIAI 467
           LRWRHLAPTAPNTL                                  GAEGQMVRLIAI
Sbjct: 361 LRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAI 420

[Close]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL
Match: A0A1S3B7Y0 (DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 8.2e-205
Identity = 368/431 (85.38%), Postives = 373/431 (86.54%), Query Frame = 0


Query: 70  LFMEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWK 129
           + MEIDS KN+ RKQC YEI DEQYKIQKETY+GQQYSHIYFARLHLMRTILHSLVS WK
Sbjct: 1   MVMEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWK 60

Query: 130 PHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLV 189
           PHLPV TVLGLEEGKECVIVGT YKHMKLKPTILDEYSKERSA PLVKPHNFMHPDDHLV
Sbjct: 61  PHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLV 120

Query: 190 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSE 249
           LEDESGRVKLSGDVLLPSVYVTGIVLALHGKET VGDFLVLDILEA LPPQIERPLISSE
Sbjct: 121 LEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSE 180

Query: 250 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 309
           DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG
Sbjct: 181 DKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRG 240

Query: 310 ILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 369
           ILNGQHLSAKDQTKL EPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP
Sbjct: 241 ILNGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFP 300

Query: 370 GSSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERT 429
           GSSAYNTFRSCTNPHCFELDN R         FLGTSGQNVDDLEKYSEAKDKLEFMERT
Sbjct: 301 GSSAYNTFRSCTNPHCFELDNLR---------FLGTSGQNVDDLEKYSEAKDKLEFMERT 360

Query: 430 LRWRHLAPTAPNTL----------------------------------GAEGQMVRLIAI 467
           LRWRHLAPTAPNTL                                  GAEGQMVRLIAI
Sbjct: 361 LRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAI 420

[Close]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL
Match: A0A6J1J5X9 (DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 PE=3 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.3e-199
Identity = 355/429 (82.75%), Postives = 369/429 (86.01%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDS KNLQRKQCTYEILDEQYKIQKETY+GQQYSHIYF RLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPV TVL LEEGKECVIVGT YKHMKLKPTILDEYSKERS TPLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           D+SGRVKLSG VLLPSVY TGI++ALHGKETCVGDF V DILEAGLPPQIERPLI +EDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+L
Sbjct: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQHLSAKDQTKL EPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           SAYNTFRSCTNPHCFELDNFR         FLGTSGQNVDDL+KYSEAKDKLEFMER+LR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFR---------FLGTSGQNVDDLDKYSEAKDKLEFMERSLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 467
           WRHLAPTAPNTL                                  G+EGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPR 420

[Close]

BLAST of CcUC10G202780 vs. TAIR 10
Match: AT2G42120.2 (DNA polymerase delta small subunit )

HSP 1 Score: 595.9 bits (1535), Expect = 2.9e-170
Identity = 291/428 (67.99%), Postives = 340/428 (79.44%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 131
           MEIDS K  +RKQ  Y  LDE+++IQKE YRGQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 132 LPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLE 191
           LPVC VLGLE+GKEC+IVGT +KHMKLKP +LDEYSKERS TPLVKPHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 192 DESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 251
           DESGRVKL+G  L P++YVTG+V+ALHGKET  G+F V D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 252 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 311
           YV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR ++
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 312 NGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 371
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 372 SAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTLR 431
           S YNTFRSCTNPH F++DN R         FLGTSGQN+DDL KYSEAK KL+F+ERTLR
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIR---------FLGTSGQNIDDLGKYSEAKSKLDFVERTLR 360

Query: 432 WRHLAPTAPNTL----------------------------------GAEGQMVRLIAIPR 466
           WRHLAPTAPNTL                                  G+EGQ+VRLI IP+
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPK 419

[Close]

BLAST of CcUC10G202780 vs. TAIR 10
Match: AT2G42120.1 (DNA polymerase delta small subunit )

HSP 1 Score: 591.3 bits (1523), Expect = 7.2e-169
Identity = 291/429 (67.83%), Postives = 340/429 (79.25%), Query Frame = 0


Query: 72  MEIDSLKNLQRKQCTYEIL-DEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKP 131
           MEIDS K  +RKQ  Y  L DE+++IQKE YRGQQYS IYFARLHLMRT+L+SL   WK 
Sbjct: 1   MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60

Query: 132 HLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVL 191
           HLPVC VLGLE+GKEC+IVGT +KHMKLKP +LDEYSKERS TPLVKPHNFMHPDD+L+L
Sbjct: 61  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120

Query: 192 EDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSED 251
           EDESGRVKL+G  L P++YVTG+V+ALHGKET  G+F V D+LEAGLPPQIERP+   ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180

Query: 252 KYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGI 311
           KYV+ +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQIVHVVI GNS E PR +
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240

Query: 312 LNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPG 371
           +NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300

Query: 372 SSAYNTFRSCTNPHCFELDNFRQVNNVSLIGFLGTSGQNVDDLEKYSEAKDKLEFMERTL 431
           SS YNTFRSCTNPH F++DN R         FLGTSGQN+DDL KYSEAK KL+F+ERTL
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIR---------FLGTSGQNIDDLGKYSEAKSKLDFVERTL 360

Query: 432 RWRHLAPTAPNTL----------------------------------GAEGQMVRLIAIP 466
           RWRHLAPTAPNTL                                  G+EGQ+VRLI IP
Sbjct: 361 RWRHLAPTAPNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIP 420

The following BLAST results are available for this feature:

BLAST of CcUC10G202780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906226.1	8.7e-209	86.71	DNA polymerase delta small subunit isoform X3 [Benincasa hispida]	[more]
XP_004136567.1	2.4e-206	86.25	DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical pr...	[more]
KAG7017557.1	9.0e-206	84.85	DNA polymerase delta small subunit [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038906225.1	5.8e-205	82.26	DNA polymerase delta small subunit isoform X2 [Benincasa hispida]	[more]
XP_038906224.1	1.0e-204	82.63	DNA polymerase delta small subunit isoform X1 [Benincasa hispida]	[more]

BLAST of CcUC10G202780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48520	4.1e-169	67.99	DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2...	[more]
Q9LRE5	4.7e-157	66.03	DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
P49005	3.7e-69	42.47	DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1	[more]
O35654	4.8e-69	42.47	DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2	[more]
Q6AXY4	1.1e-68	42.47	DNA polymerase delta subunit 2 OS=Rattus norvegicus OX=10116 GN=Pold2 PE=1 SV=1	[more]

BLAST of CcUC10G202780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF21	1.1e-206	86.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1	[more]
A0A5D3DQ54	8.2e-205	85.38	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7TKC4	8.2e-205	85.38	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3B7Y0	8.2e-205	85.38	DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 ...	[more]
A0A6J1J5X9	2.3e-199	82.75	DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 P...	[more]

BLAST of CcUC10G202780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42120.2	2.9e-170	67.99	DNA polymerase delta small subunit	[more]
AT2G42120.1	7.2e-169	67.83	DNA polymerase delta small subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.60.21.50		coord: 240..445 e-value: 1.5E-71 score: 242.9
None	No IPR available	GENE3D	2.40.50.430		coord: 111..235 e-value: 3.8E-34 score: 119.2
IPR040663	DNA polymerase delta subunit, OB-fold domain	PFAM	PF18018	DNA_pol_D_N	coord: 105..232 e-value: 1.9E-38 score: 131.5
IPR007185	DNA polymerase alpha/delta/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 253..442 e-value: 5.0E-34 score: 117.5
IPR024826	DNA polymerase delta/II small subunit family	PANTHER	PTHR10416	DNA POLYMERASE DELTA SUBUNIT 2	coord: 78..444

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G202780.1	CcUC10G202780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006271	DNA strand elongation involved in DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding