Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CCTAAAAGAGGAGTGATTTCACTGGAATCAGAAGAGTTGAAGTGCAAACACTTCAAAGTGACCAGTGTAGATGCTGGGTCGAGTCAAAGGCACCGGAATGTCCAAGTTCCATGTATGGCCTTCTACCTTGATGAGGAAACTGGACATCACCAGAGAAAGAACTGGTAAGAGCCTGTGAAACTTGGTGATTGAGACCCAGATCAGATGTCAGGTCCAGGGAGCTGCTAGCGGGAACTTCATTCCCCTTGAAACCCCACGACATGGTCGGAAAATGATTGGTAGCAGCATGAGGTGTAGCTGTTTGAGCCACAAGTGCACCTTCAGCATTTAACAAGGCATTTACCTCGACAGCCGTTGTTCGGTTTCTGGAGCCCCATGTTTGGTTTGACAGAAGAGAGAGAGCACAGGATGAGTCAGCAACTCCATTGATGCATCCACCAGAAGGATTCCCAGGACCAGAAAAGCTGGTTCCACCTGAAGGAGGAACTGGCAAGAGAAGTTCAGATGGATTGTTCTCAGAGTTGCTCTGCCAGGGATGTGGGACGTATTTCCCCATGGAAGTGATGCTCTGGTTTCCAGGTACCTGCTCAGATGCTTTCGTCCCGGACGACCAGACATCTTTTCCTGTTAGCTTTGGATATGCACTGAAATCCATTAGAAAGCTTCCAACTCTGCTGCTGTTTTCTATCATTGCAAGCAGCAAACACATGGTTAGTCTTTGCACAAAGACTAAGTTGATAAAAAGAAATAGGCAGATGAAGCTGGAGGGATGGTGATGGCCATGACTAACCAAAGATAGATGAAGAGAAGCGGCCATAACGTGTGGATAATAGCGACCCAGGTGGAGGCTTCCTACGGCGCTCGTTGTGACCAGCCAGACGTCTGCGACAACTACGTTTTCCTTGATCAAATTCAGGAAGCTGATGAAATCTGGCAAAAACCAAATCAGCATTCAGTTTCAGTAAGCTACTTGAGAAGAAAACATAACACATCTGGAAACACTAAACACTAA mRNA sequence CCTAAAAGAGGAGTGATTTCACTGGAATCAGAAGAGTTGAAGTGCAAACACTTCAAAGTGACCAGTGTAGATGCTGGGTCGAGTCAAAGGCACCGGAATGTCCAAGTTCCATGTATGGCCTTCTACCTTGATGAGGAAACTGGACATCACCAGAGAAAGAACTGGTCCAGGGAGCTGCTAGCGGGAACTTCATTCCCCTTGAAACCCCACGACATGGCATTTACCTCGACAGCCGTTGTTCGGTTTCTGGAGCCCCATGTTTGGTTTGACAGAAGAGAGAGAGCACAGGATGAGTCAGCAACTCCATTGATGCATCCACCAGAAGGATTCCCAGGACCAGAAAAGCTGGTTCCACCTGAAGGAGGAACTGGCAAGAGAAGTTCAGATGGATTGTTCTCAGAGTTGCTCTGCCAGGGATGTGGGACGTATTTCCCCATGGAAGTGATGCTCTGGTTTCCAGGTACCTGCTCAGATGCTTTCGTCCCGGACGACCAGACATCTTTTCCTGTTAGCTTTGGATATGCACTGAAATCCATTAGAAAGCTTCCAACTCTGCTGCTGTTTTCTATCATTGCAAGCAGCAAACACATGATGAAGAGAAGCGGCCATAACGTGTGGATAATAGCGACCCAGGTGGAGGCTTCCTACGGCGCTCGTTGTGACCAGCCAGACGTCTGCGACAACTACGTTTTCCTTGATCAAATTCAGGAAGCTGATGAAATCTGGCAAAAACCAAATCAGCATTCAGTTTCAGTAAGCTACTTGAGAAGAAAACATAACACATCTGGAAACACTAAACACTAA Coding sequence (CDS) CCTAAAAGAGGAGTGATTTCACTGGAATCAGAAGAGTTGAAGTGCAAACACTTCAAAGTGACCAGTGTAGATGCTGGGTCGAGTCAAAGGCACCGGAATGTCCAAGTTCCATGTATGGCCTTCTACCTTGATGAGGAAACTGGACATCACCAGAGAAAGAACTGGTCCAGGGAGCTGCTAGCGGGAACTTCATTCCCCTTGAAACCCCACGACATGGCATTTACCTCGACAGCCGTTGTTCGGTTTCTGGAGCCCCATGTTTGGTTTGACAGAAGAGAGAGAGCACAGGATGAGTCAGCAACTCCATTGATGCATCCACCAGAAGGATTCCCAGGACCAGAAAAGCTGGTTCCACCTGAAGGAGGAACTGGCAAGAGAAGTTCAGATGGATTGTTCTCAGAGTTGCTCTGCCAGGGATGTGGGACGTATTTCCCCATGGAAGTGATGCTCTGGTTTCCAGGTACCTGCTCAGATGCTTTCGTCCCGGACGACCAGACATCTTTTCCTGTTAGCTTTGGATATGCACTGAAATCCATTAGAAAGCTTCCAACTCTGCTGCTGTTTTCTATCATTGCAAGCAGCAAACACATGATGAAGAGAAGCGGCCATAACGTGTGGATAATAGCGACCCAGGTGGAGGCTTCCTACGGCGCTCGTTGTGACCAGCCAGACGTCTGCGACAACTACGTTTTCCTTGATCAAATTCAGGAAGCTGATGAAATCTGGCAAAAACCAAATCAGCATTCAGTTTCAGTAAGCTACTTGAGAAGAAAACATAACACATCTGGAAACACTAAACACTAA Protein sequence PKRGVISLESEELKCKHFKVTSVDAGSSQRHRNVQVPCMAFYLDEETGHHQRKNWSRELLAGTSFPLKPHDMAFTSTAVVRFLEPHVWFDRRERAQDESATPLMHPPEGFPGPEKLVPPEGGTGKRSSDGLFSELLCQGCGTYFPMEVMLWFPGTCSDAFVPDDQTSFPVSFGYALKSIRKLPTLLLFSIIASSKHMMKRSGHNVWIIATQVEASYGARCDQPDVCDNYVFLDQIQEADEIWQKPNQHSVSVSYLRRKHNTSGNTKH
Homology
BLAST of CcUC10G202660 vs. ExPASy TrEMBL
Match: A0A2P2N1E5 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.1e-04 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query: 198 MKRSGHNVWIIATQVEASYGARCDQPDVCDNYVFLDQIQEADEIWQK 245
+K+ GH+ QV ASY AR DQ C N+VFL QIQEADEIW++
Sbjct: 7 LKKLGHSGLTAMIQVVASYVARYDQLGACGNFVFLGQIQEADEIWKQ 53
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A2P2N1E5 | 9.1e-04 | 55.32 | Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 95..125 |
Relationships
The following mRNA feature(s) are a part of this gene:
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