CcUC10G200890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G200890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Calcium-binding EF-hand family protein
Location	CicolChr10: 27899770 .. 27900264 (+)
RNA-Seq Expression	CcUC10G200890
Synteny	CcUC10G200890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCGCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGTGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGCTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

mRNA sequence

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCGCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGTGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGCTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

Coding sequence (CDS)

ATGAAGCTCCTCAAATCCTTCAATCCCAACCGTCTCTTCTCTTCCAAATCCCACCGCTCCAAACTCTCCCGATCTCAACCTCCTTCCTTCGGCTCCGCCTCCTCCTCCTCCTCCGCCGGCACCCCCACCAGCGTCTTGCCGTCCGGCGTCTGGTCCGACTTCTCCGACTCCACACTCTCTCGCAAGGAACTGGAGGCTCTACTCGGTTTAATCGGAGCCGAACCGCCGAGTGAGGAAGAGCTCAAGATTATGATGTGCGAAATGGACCGGGTCGGACCGGCTTGCCACTCCGAGCTACGAGACACGTTTGAGATATTCGACGCTGACCGCGACGGGAGAATTACGGCGGAGGAGCTTTTTAGTGTGTTCACGGCTATGGGAGATGAGCGCTGCACGTTAGAGGATTGCCGGCGTATGATAGCGGGAGTAGACAAGAATGGGGATGGGTTCGTCTGCTTCGAAGACTTTGCGCGTATGATGGACTGCCAGAGATGA

Protein sequence

MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDFSDSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR

Homology

[Close]

BLAST of CcUC10G200890 vs. NCBI nr
Match: XP_038903370.1 (probable calcium-binding protein CML36 [Benincasa hispida])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 158/164 (96.34%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDFSDSTLS 60
           MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPS VWSDFSDSTLS
Sbjct: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSAVWSDFSDSTLS 60

Query: 61  RKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITAEELF 120
           RKELEALLGLIGAEPPSEEELK MM  MDRVGPACHSELRDTFEIFDAD DGRITAEELF
Sbjct: 61  RKELEALLGLIGAEPPSEEELKTMMGAMDRVGPACHSELRDTFEIFDADHDGRITAEELF 120

Query: 121 SVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           SVFTAMGDE+CTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR
Sbjct: 121 SVFTAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 164

[Close]

BLAST of CcUC10G200890 vs. NCBI nr
Match: XP_008443339.2 (PREDICTED: probable calcium-binding protein CML35 [Cucumis melo] >KAA0053814.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa] >TYK25587.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 154/168 (91.67%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS----SSAGTPTSVLPSGVWSDFSD 60
           MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS    SSAGTPTSVLPS  W+DFSD
Sbjct: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLPSLDWADFSD 60

Query: 61  STLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 120
            TLSRKEL+ALLGLIGAEPPSEEE+KIMM EMDRVGPACHSELRDTFEIFDAD DGRITA
Sbjct: 61  PTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDGRITA 120

Query: 121 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVFTAMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFARMMDCQR
Sbjct: 121 EELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 168

[Close]

BLAST of CcUC10G200890 vs. NCBI nr
Match: XP_004136671.2 (probable calcium-binding protein CML35 [Cucumis sativus] >KGN59507.1 hypothetical protein Csa_001340 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 149/167 (89.22%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSS---AGTPTSVLPSGVWSDFSDS 60
           MKLLKS NPNRLFSSKSHRSKLSRSQPPSFGSASSSSS   AGTPTSVLPS  WSDFSD 
Sbjct: 1   MKLLKSLNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSSAAGTPTSVLPSLDWSDFSDP 60

Query: 61  TLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITAE 120
           TLSRKEL+ALLGLIGAEPPSEEE+KIMM EMDRVGP CHSELRDTFEIFDAD DGRITAE
Sbjct: 61  TLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPTCHSELRDTFEIFDADHDGRITAE 120

Query: 121 ELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           ELFSVF AMGD+ CTLEDC+RMIAGVDKNGDGFVCF+DF RMMDCQR
Sbjct: 121 ELFSVFAAMGDDGCTLEDCQRMIAGVDKNGDGFVCFDDFVRMMDCQR 167

[Close]

BLAST of CcUC10G200890 vs. NCBI nr
Match: KAG6580931.1 (putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017674.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.1 bits (640), Expect = 6.4e-63
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP-------SGVWSDFSDS 64
           KSF+P RLF SK HR+ LS+S+PPSFGSASSSS    PTSVLP       SG WSDFSD+
Sbjct: 9   KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS----PTSVLPPHPHPHLSGEWSDFSDT 68

Query: 65  -TLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 124
            T  RKELEALLGLIGAEPPSEEELK+MM ++D+VGP CHSELRDTFEIFDAD DGRITA
Sbjct: 69  HTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDGRITA 128

Query: 125 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVF+AMGDE+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+CQR
Sbjct: 129 EELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 172

[Close]

BLAST of CcUC10G200890 vs. NCBI nr
Match: XP_022983878.1 (probable calcium-binding protein CML36 [Cucurbita maxima])

HSP 1 Score: 251.1 bits (640), Expect = 6.4e-63
Identity = 132/168 (78.57%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP-------SGVWSDFSDS 64
           KSF+P RLF SK HR+ LS+S+PPSFGSAS SS    PTSVLP       SG WSDFSD+
Sbjct: 21  KSFSPGRLFPSKKHRTSLSKSEPPSFGSASFSS----PTSVLPPHPHPHLSGEWSDFSDT 80

Query: 65  TLS-RKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 124
            +  RKELEALLGLIGAEPPSEEELK+MM ++D+VGPACHSELRDTFEIFDAD DGRITA
Sbjct: 81  HIDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPACHSELRDTFEIFDADHDGRITA 140

Query: 125 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVF+AMGDE+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+CQR
Sbjct: 141 EELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 184

[Close]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-31
Identity = 96/209 (45.93%), Postives = 117/209 (55.98%), Query Frame = 0


Query: 1   MKLLKSFN---PNRLFSSKSHRSKLSRSQPPSFGS-ASSSSSAG-----------TPTSV 60
           MKL  S N   P RLF +KS ++ +SRS+P SF S ASSSSS G           TP SV
Sbjct: 1   MKLAASLNRLSPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISV 60

Query: 61  LPSGVWSDF--------------SDSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRV 120
           LP     DF               D  +SR +L AL+  +  EPPS+EE+ +M+ E+D  
Sbjct: 61  LPQNS-GDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGG 120

Query: 121 GPACHS--------------------ELRDTFEIFDADRDGRITAEELFSVFTAMGDERC 161
              C S                    ELR+ FEIFD DR+G+I+AEEL  VF  +GDERC
Sbjct: 121 DGGCISLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERC 180

[Close]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-31
Identity = 97/211 (45.97%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPP-SFGSASSSS------SAG-------TPTSVL 60
           MKL K   P R F     RS +S+S    SFGSASSSS      S G       TPTS+L
Sbjct: 1   MKLAKLI-PKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTSIL 60

Query: 61  PSGVWSDFS---------------DSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRV 120
           P  V S +S               D  +SR +LE+LL  +G +P +EEE+ +M+ E+D  
Sbjct: 61  PE-VPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCD 120

Query: 121 G-----------------PACHS-ELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTL 165
           G                 PA  S EL++TFE FDADRDG I+A+EL  VF+ +GDERCTL
Sbjct: 121 GDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCTL 180

[Close]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-15
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0


Query: 56  DSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPA-------------------CH 115
           D  +S KEL A++  +G E P EEEL+  + E+DR G                       
Sbjct: 50  DGKISSKELGAIMTSLGHEVP-EEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVL 109

Query: 116 SELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDF 161
             L+D F ++D D +G I+AEEL  V  ++GDE C++ +CR+MI GVDK+GDG + FE+F
Sbjct: 110 ENLKDAFSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEF 169

[Close]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 50  VWSDFSDSTLSRKELEALLGLIGAEPP--SEEELKIMMCEMDRVG--------------- 109
           V+  F  +   +  ++ L  +IGA  P  S+EE K MM E D  G               
Sbjct: 19  VFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQI 78

Query: 110 ------PACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKN 161
                  +   +L++ F+++D DR+GRI+A EL SV   +G E+C+++DC+RMI  VD +
Sbjct: 79  SDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSD 138

[Close]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot
Match: Q5ZCK5 (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 GN=CML16 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13
Identity = 54/128 (42.19%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 56  DSTLSRKELEALLGLIGAEPPSE----EELKIMMCEMDR------------------VGP 115
           D  +S  EL A+   I A PPSE     E+  MM E+D                    G 
Sbjct: 40  DGRISPSELAAVTRAI-APPPSESAGGREVAAMMNELDTDRDGFVDLGEFAAFHGRGRGD 99

Query: 116 ACH-SELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVC 161
           A H +ELR  F+++D D DGRITA EL  V   +G E C+ E+C RMIA VD +GDG V 
Sbjct: 100 AEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIG-EGCSAEECERMIASVDVDGDGCVG 159

[Close]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL
Match: A0A5A7UEZ0 (Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007460 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 154/168 (91.67%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS----SSAGTPTSVLPSGVWSDFSD 60
           MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS    SSAGTPTSVLPS  W+DFSD
Sbjct: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLPSLDWADFSD 60

Query: 61  STLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 120
            TLSRKEL+ALLGLIGAEPPSEEE+KIMM EMDRVGPACHSELRDTFEIFDAD DGRITA
Sbjct: 61  PTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDGRITA 120

Query: 121 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVFTAMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFARMMDCQR
Sbjct: 121 EELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 168

[Close]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL
Match: A0A1S3B7R8 (probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 154/168 (91.67%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS----SSAGTPTSVLPSGVWSDFSD 60
           MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSS    SSAGTPTSVLPS  W+DFSD
Sbjct: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLPSLDWADFSD 60

Query: 61  STLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 120
            TLSRKEL+ALLGLIGAEPPSEEE+KIMM EMDRVGPACHSELRDTFEIFDAD DGRITA
Sbjct: 61  PTLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPACHSELRDTFEIFDADHDGRITA 120

Query: 121 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVFTAMGDE CTLEDCRRMIAGVDKNGDGFVCF+DFARMMDCQR
Sbjct: 121 EELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARMMDCQR 168

[Close]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL
Match: A0A0A0LFY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823060 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.1e-74
Identity = 149/167 (89.22%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSS---AGTPTSVLPSGVWSDFSDS 60
           MKLLKS NPNRLFSSKSHRSKLSRSQPPSFGSASSSSS   AGTPTSVLPS  WSDFSD 
Sbjct: 1   MKLLKSLNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSSAAGTPTSVLPSLDWSDFSDP 60

Query: 61  TLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITAE 120
           TLSRKEL+ALLGLIGAEPPSEEE+KIMM EMDRVGP CHSELRDTFEIFDAD DGRITAE
Sbjct: 61  TLSRKELKALLGLIGAEPPSEEEIKIMMGEMDRVGPTCHSELRDTFEIFDADHDGRITAE 120

Query: 121 ELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           ELFSVF AMGD+ CTLEDC+RMIAGVDKNGDGFVCF+DF RMMDCQR
Sbjct: 121 ELFSVFAAMGDDGCTLEDCQRMIAGVDKNGDGFVCFDDFVRMMDCQR 167

[Close]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL
Match: A0A6J1J8Y7 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111482360 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 132/168 (78.57%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP-------SGVWSDFSDS 64
           KSF+P RLF SK HR+ LS+S+PPSFGSAS SS    PTSVLP       SG WSDFSD+
Sbjct: 21  KSFSPGRLFPSKKHRTSLSKSEPPSFGSASFSS----PTSVLPPHPHPHLSGEWSDFSDT 80

Query: 65  TLS-RKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 124
            +  RKELEALLGLIGAEPPSEEELK+MM ++D+VGPACHSELRDTFEIFDAD DGRITA
Sbjct: 81  HIDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPACHSELRDTFEIFDADHDGRITA 140

Query: 125 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVF+AMGDE+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+CQR
Sbjct: 141 EELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 184

[Close]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL
Match: A0A6J1FB49 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111442449 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 5   KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP-------SGVWSDFSDS 64
           KSF+P RLF SK HR+ LS+S+PPSFGSASSSS    PTSVLP       SG WSDFSD+
Sbjct: 21  KSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSS----PTSVLPPHPHPHLSGEWSDFSDT 80

Query: 65  -TLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPACHSELRDTFEIFDADRDGRITA 124
            T  RKELEALLGLIGAEPPSEEELK+MM ++D+VGP CHSELRDTFEIFDAD DGRITA
Sbjct: 81  HTDYRKELEALLGLIGAEPPSEEELKMMMSQVDKVGPPCHSELRDTFEIFDADHDGRITA 140

Query: 125 EELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQR 165
           EELFSVF+AMGDE+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+CQR
Sbjct: 141 EELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQR 184

[Close]

BLAST of CcUC10G200890 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32
Identity = 96/209 (45.93%), Postives = 117/209 (55.98%), Query Frame = 0


Query: 1   MKLLKSFN---PNRLFSSKSHRSKLSRSQPPSFGS-ASSSSSAG-----------TPTSV 60
           MKL  S N   P RLF +KS ++ +SRS+P SF S ASSSSS G           TP SV
Sbjct: 1   MKLAASLNRLSPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISV 60

Query: 61  LPSGVWSDF--------------SDSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRV 120
           LP     DF               D  +SR +L AL+  +  EPPS+EE+ +M+ E+D  
Sbjct: 61  LPQNS-GDFYTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGG 120

Query: 121 GPACHS--------------------ELRDTFEIFDADRDGRITAEELFSVFTAMGDERC 161
              C S                    ELR+ FEIFD DR+G+I+AEEL  VF  +GDERC
Sbjct: 121 DGGCISLEDLASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERC 180

[Close]

BLAST of CcUC10G200890 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32
Identity = 97/211 (45.97%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 1   MKLLKSFNPNRLFSSKSHRSKLSRSQPP-SFGSASSSS------SAG-------TPTSVL 60
           MKL K   P R F     RS +S+S    SFGSASSSS      S G       TPTS+L
Sbjct: 1   MKLAKLI-PKRFFIRSKDRSTVSKSPTAFSFGSASSSSGQDCKNSGGDGGGGSVTPTSIL 60

Query: 61  PSGVWSDFS---------------DSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRV 120
           P  V S +S               D  +SR +LE+LL  +G +P +EEE+ +M+ E+D  
Sbjct: 61  PE-VPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCD 120

Query: 121 G-----------------PACHS-ELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTL 165
           G                 PA  S EL++TFE FDADRDG I+A+EL  VF+ +GDERCTL
Sbjct: 121 GDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDERCTL 180

[Close]

BLAST of CcUC10G200890 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0


Query: 56  DSTLSRKELEALLGLIGAEPPSEEELKIMMCEMDRVGPA-------------------CH 115
           D  +S KEL A++  +G E P EEEL+  + E+DR G                       
Sbjct: 50  DGKISSKELGAIMTSLGHEVP-EEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVL 109

Query: 116 SELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDF 161
             L+D F ++D D +G I+AEEL  V  ++GDE C++ +CR+MI GVDK+GDG + FE+F
Sbjct: 110 ENLKDAFSVYDIDGNGSISAEELHEVLRSLGDE-CSIAECRKMIGGVDKDGDGTIDFEEF 169

[Close]

BLAST of CcUC10G200890 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 50  VWSDFSDSTLSRKELEALLGLIGAEPP--SEEELKIMMCEMDRVG--------------- 109
           V+  F  +   +  ++ L  +IGA  P  S+EE K MM E D  G               
Sbjct: 19  VFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVALFQI 78

Query: 110 ------PACHSELRDTFEIFDADRDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKN 161
                  +   +L++ F+++D DR+GRI+A EL SV   +G E+C+++DC+RMI  VD +
Sbjct: 79  SDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG-EKCSIQDCQRMINKVDSD 138

[Close]

BLAST of CcUC10G200890 vs. TAIR 10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13
Identity = 58/171 (33.92%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 9   PNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLPSGVWSDF---SDSTLSRKELE 68
           P+R+FS     S LS   P  F   S +             V+S F    D  +S+ E +
Sbjct: 22  PSRMFSRDRQSSGLSSPGPGGFSQPSVNEM---------RRVFSRFDLDKDGKISQTEYK 81

Query: 69  ALLGLIGAEPPSEEELKIMMC-EMD---------------RVGPACHSELRDTFEIFDAD 128
            +L  +G E   E+  KI    ++D               R G    S++R++F  FD +
Sbjct: 82  VVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSDIRNSFWTFDLN 141

Query: 129 RDGRITAEELFSVFTAMGDERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 161
            DG+I+AEE+ SV   +G ERC+LEDC RM+  VD +GDG V  E+F +MM
Sbjct: 142 GDGKISAEEVMSVLWKLG-ERCSLEDCNRMVRAVDADGDGLVNMEEFIKMM 182

The following BLAST results are available for this feature:

BLAST of CcUC10G200890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903370.1	2.6e-80	96.34	probable calcium-binding protein CML36 [Benincasa hispida]	[more]
XP_008443339.2	3.0e-76	91.67	PREDICTED: probable calcium-binding protein CML35 [Cucumis melo] >KAA0053814.1 p...	[more]
XP_004136671.2	1.1e-73	89.22	probable calcium-binding protein CML35 [Cucumis sativus] >KGN59507.1 hypothetica...	[more]
KAG6580931.1	6.4e-63	79.17	putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022983878.1	6.4e-63	78.57	probable calcium-binding protein CML36 [Cucurbita maxima]	[more]

BLAST of CcUC10G200890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30188	3.9e-31	45.93	Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 ...	[more]
Q9SS31	3.9e-31	45.97	Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 ...	[more]
Q9FYK2	1.8e-15	39.52	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ...	[more]
Q9C8Y1	1.7e-13	35.82	Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ...	[more]
Q5ZCK5	4.8e-13	42.19	Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CcUC10G200890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UEZ0	1.4e-76	91.67	Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B7R8	1.4e-76	91.67	probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 P...	[more]
A0A0A0LFY7	5.1e-74	89.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823060 PE=4 SV=1	[more]
A0A6J1J8Y7	3.1e-63	78.57	probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC1114823...	[more]
A0A6J1FB49	3.1e-63	79.17	probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of CcUC10G200890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41410.1	2.8e-32	45.93	Calcium-binding EF-hand family protein	[more]
AT3G10190.1	2.8e-32	45.97	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	1.3e-16	39.52	EF hand calcium-binding protein family	[more]
AT1G66400.1	1.2e-14	35.82	calmodulin like 23	[more]
AT2G15680.1	2.9e-13	33.92	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 135..163 e-value: 0.0022 score: 27.2 coord: 98..126 e-value: 2.8E-5 score: 33.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 98..160 e-value: 2.1E-8 score: 34.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 94..129 score: 13.034948
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 131..164 score: 11.695971
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 98..160 e-value: 1.24224E-17 score: 70.6545
None	No IPR available	GENE3D	1.10.238.10		coord: 94..164 e-value: 1.1E-19 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..45
None	No IPR available	PANTHER	PTHR10891:SF790	CALCIUM-BINDING PROTEIN CML35-RELATED	coord: 4..95 coord: 94..162
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 4..95 coord: 94..162
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 144..156
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 107..119
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 55..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G200890.1	CcUC10G200890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding