CcUC10G198660 (gene) Watermelon (PI 537277) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCCCTTGGTACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGAGGTCGGGTAATTTCTTGGTCCTCCGCCAGTACGTGTGGATTCAAATGTACAACCTCTCGTCGCACCGAAAATATAATCCCTTTTCTTTCTTGGCTTGGAACTCCACCTCAGAAAATCTCTTTATATGTCCCACTGTTTGATTAAGATTGTTGTTATCTAGAGTGGTAGAGGTGCAAGGAAAAACTGAAAAAACCCCACTTAAGCCGACCGAAAACCACTCGTCGGGTCGGATAGAAGTCGGTCGGGTTAGCAGTGTCACATTAAAAACCGAAAATTATCAATCAATTTCAGGTTGAGTAAAAGAAAGAGTTGAAAAACCAAACTGGCCGATTAGAATATATATATATTAAGTTTTAGATTATGTTTCAAAATGTACTCTTGTTAAGTTAGTAAGTAATCACCCCTGGAAACATTTGGTCAAAATGTACTCTTGTTAAGTTAGTAAGTAATCACCCCCGGAAACATTTGGTCATGGGTTCGAATCTAGGGAGTATAAAAGTTTTATTTTATTTCACATTTAATTTAAATTGTTGTAATGTGTCTCTCTCCCAACCATATATTCCTGCGCACATCCATTATTCAGCCAACCGAGACCTGAGTCGACCTAACCCACCGGTCTAAACGGTTTGGGCAGTTCGATTGCCTAACAACTCCGATTCGCACACGAATTCTTCATTGATTTGAGCAGTTCAGTTCCAATTTTCTCTAAAAACCGAGGCGAACCAAACCGTTTACACTCCTATAGAGTAACCACTATTCGAATGGAATTGTTTTTTTATAAAAGCAACAACTTTCATTGAGAAAAAAATGAAAGAATACAAGGGCATACAAAAAACCAAACCCAAAAAACCCCTCATAGGAAGGGAAACCAACTAAGTAAGATATTGCCTAGGGAATAATTACAAAAAGTCTTCAAAACGGACGCCCACAGAGAAACATGAAACCTTACAAGGGACCAAACCTCGCTAGGGTCCCTTTCCACTTCACGAAAAACTCTGTTGTTTCTCTCCCCCCCAGATATCCCATAAAATTGCACACTCTCGCAAACCAAAGAAGACGGTCTTTCTCTCTGAAAGACGGATGGAGAAGGAACTCCTTGATTGTCAAACGAACATCTCTCTGACGAGCAAGCGCAAAATCAAACTCCAAAAAGAAGTCATTCCACACCAATCTTGCAAACTGGCACTCCCAAAGAAAGTGATCCAGGTTTTCCTCTGCCTTCCGACAAAGGATACAGCACCATGGGCCCACAAGCGAAGAAATCTTTCTCACAAACCTATCTGTTGTATTCACACACCCAAGCAAAACTTGCCAAGAAAAGAATTTAACTTTTTTTTGGAATCTTAATCCTCCATAAAACATCAAAGACCAACTCAACAACTTGAGAGGGATTAAGTAAAAGCCTAAAGAAAGACTCACAGGAGAAGCCCTCCGTAGGGGAAGGACTCCACACCCGAACATCCTTTCTCCCAAGCCTAAAATCAAAACCCTCAATCAAGGAAAGAAAAGAGGCCACCTCCGTCGTTTCCCTAATGCACAAAGATCGACGGAAACCAAAGGAGAAAGAGACCGAGTTCCCCGACCAAACCAAAAAATCAAACACAAGACAATTTTTAAAGGAGGACAAATGATATAACCGAGGAAATGCAGAGCAAAGGGGTCTATCCCCCATCCAAAGATCTTCCCAAAAGTAAATTTCCTTGTCGTCTCCCACCACACAGAAAACAAGGTGGGAAAAAGAAGGGAGATGAGAAGAAATGTCTCTCCACAGGTTTCGGTGTGTACCTTTAACCCTTTCACCACCCACTCATATAGAAAGGGACCATGCTTACTCACAATAATCTTCCACCACAAGTATTCAGATTCAAGGGAAAACCACCAAAGCCATTTAGCCAACAGGGCTTTGTTGCGTAACATTAAAATTCCGAGCTCCAACACCCCCTGATTCACAGGTTTCCCCACAGCCTCCCAGCTAACCAAATGAGAACCTTTCCCTTCCTCCACCCCTTCCCAAAGGAAGTTGTTATCGAGACCCTGATTCTCAATTCGATTCCTGGATGGGTTGGTGGGTTTGTGCAACTAGAGGCGCCTTGGACGAATTGGGCTTATTGGGCCAAGGCTCTAACACTTCTAGAGCCATCCTGATTGCCATATCTTGATCGTCTACTAATTGAGCCTCCTTCTTAGGCAATTCTTTGATGCATCTACAGAGGATAACAGAACTTTGAAAGTAGAGAAACAAATAATTACATAATGGTTGGATGTTAAAATTTTAGCTTCCTTATAATGCTCTTGGACTAATTCATGTTTCATGATTGTGCAAAATCCAATTGTTTCTGTACTTCCATAGTTTTACAGTTGATAGGAATTTTAATCATATAACTCTGCATGTTCTCCAAACTAATTATTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAATTCTTCTCATAAAAATTATTCATATATATATAACAAAATCCCAAAGTTTCCGAGACACCATAAACAAGAAAACAAACCTTATTTGGTACTAACCCGGTCAATTTCATATCCTCAATCAGCTCATTGGCCTTTTTATAGTCTCCGCTCATTGAATAAGCATTGAGTAGAGAGCCATAATGGAACATGTTTGGTGAATGACCTTCAGTTCTCATCTGGTTGAAGAAGCTCTCTGCGTCTTCCAATCTATTATGTGAAGCACAAATAGCCATCAGTGTCCCATATGATACACAATCCATGCATAGTCCATTATCTTGCAGCTCCTTAAGAAGCTCCAATGCTTTAGCATAACCATGTTTAACCTTGATGCAACCAGTAAGCATCTGGTTGAAAGTAGACAAATCGCCCTTGGTACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGAGGTCGGGTAATTTCTTGGTCCTCCGCCAGTACCTCCTTAAGAAGCTCCAATGCTTTAGCATAACCATGTTTAACCTTGATGCAACCAGTAAGCATCTGGTTGAAAGTAGACAA ATCGCCCTTGGTACCAAAGGGCGTTATTCATGTTCAAGCAAGTTTCAACAATACAATTGTGACTGTTACAGATGTACGAGGTCGGGTAATTTCTTGGTCCTCCGCCAGTACCTCCTTAAGAAGCTCCAATGCTTTAGCATAACCATGTTTAACCTTGATGCAACCAGTAAGCATCTGGTTGAAAGTAGACAA IALGTKGRYSCSSKFQQYNCDCYRCTRSGNFLVLRQYLLKKLQCFSITMFNLDATSKHLVESRQ Homology
BLAST of CcUC10G198660 vs. NCBI nr
Match: AKJ77696.1 (translation initiation factor 1, partial [Fagopyrum cymosum]) HSP 1 Score: 56.2 bits (134), Expect = 1.2e-04 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of CcUC10G198660 vs. NCBI nr
Match: QUX33651.1 (30S ribosomal protein S11 [Handeliodendron bodinieri]) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of CcUC10G198660 vs. NCBI nr
Match: YP_010043289.1 (30S ribosomal protein S11 [Handeliodendron bodinieri] >QPD06571.1 30S ribosomal protein S11 [Handeliodendron bodinieri]) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04 Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of CcUC10G198660 vs. NCBI nr
Match: YP_010125518.1 (30S ribosomal protein S11 [Aesculus assamica] >QJQ37670.1 ribosomal protein S11 [Aesculus chinensis] >QRF99844.1 30S ribosomal protein S11 [Aesculus assamica]) HSP 1 Score: 53.5 bits (127), Expect = 7.7e-04 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CcUC10G198660 vs. NCBI nr
Match: YP_009747265.1 (30S ribosomal protein S11 [Aesculus chinensis] >QII42990.1 30S ribosomal protein S11 [Aesculus chinensis]) HSP 1 Score: 53.5 bits (127), Expect = 7.7e-04 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CcUC10G198660 vs. ExPASy TrEMBL
Match: A0A0K0N899 (Translation initiation factor 1 (Fragment) OS=Fagopyrum cymosum OX=62329 GN=infA PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.7e-05 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0
BLAST of CcUC10G198660 vs. ExPASy TrEMBL
Match: A0A7S8FII3 (30S ribosomal protein S11 OS=Handeliodendron bodinieri OX=290952 GN=rps11 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.8e-05 Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0
BLAST of CcUC10G198660 vs. ExPASy TrEMBL
Match: A0A6M4B8N9 (Ribosomal protein S11 OS=Aesculus chinensis OX=290911 GN=rps11 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CcUC10G198660 vs. ExPASy TrEMBL
Match: A0A6G7IXF6 (30S ribosomal protein S11, chloroplastic OS=Aesculus chinensis OX=290911 GN=rps11 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CcUC10G198660 vs. ExPASy TrEMBL
Match: A0A7J9EF69 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_007158 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04 Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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