CcUC10G198140 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G198140
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 24851750 .. 24853163 (+)
RNA-Seq Expression	CcUC10G198140
Synteny	CcUC10G198140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTGATTATTAAACGAAATATATTCATAAAAGTAAAATTATAATCTCTAACAGTATTAGAAATTTTCTCAATACAACTTACTTGGTGGGAATAGAATATTCAGGAAAGAGGTTTGCAAGGATATCAACCAATTCTCCACGATGAAGCATACTCTCAACACAAATATATCTGCCTGAAGCTGAAGGAGTTTCATAAACCAAAACATGTGCTTTTGCAACATCCTTGACATCAACATATCCTTGAACTGCATTTACATATGTCTTTGCTGATCCTGTCAAATATTTCATTATATGAACTACACTTGCATTTACACCTTCTTGCAACAAAGGCCCCAATACCAACATTGGATTCACCACAACAAGATCCACTTCTTTTTCTTTTGCCACTTCCCATGCTGTTTGTTCTGCCACTGTCTTTGCATAACAATACCAATTCTGTACATAAATTTAATCCAAACTTCAATATTCACCATATATTTTTCAGCACTTTTAAGGTTAATAATTAAATATATACCAACATTTTAAATAATTGCAAATATAGCAAAATCTATCCATGATAAACTACTGTTGATAGACGGACATGATATAGTCTATCACCAACGGACTCTAAAAGTCAAATCTAAATTTTTCTATATTTATAAATTCTTTTGAATTGTACATTTTTACTAATACATTGGATCTATTTGCTATATTTGCAGCCGTCTGTTTTTTTTTTTTTTTTGTTTCATAAAATTATTGCTAGTTTGTTTTGGAAGTCAATTACAGGGGAATTACAAGTCAATTACCTTGGTGTTCTTGCAAAACTCAAGGTCACTCCAACAAGACTCATCCACTACCGCGTCGGGGCTTCGGTTAGGGTTCATATAGACGGTGCCGATCGATGACGTGAACACCACTCGTCGAACGTTTGCTTCAGCGGCAGCGGTCATGACGTTCTTTGTTCCGATTATGGCCTGTTCCACCTTTTCCTGTAAATTGATGTGAGTTAATATTGTTGTTATTTGCCATATAAAAATGTAAATATTGTTTCAATTGAAAATAAGTTCTTACAGGATCATCGGTCACCGGAGACGCAGTGTGGAAAACACCATGACAACCCATAATGGCTGCTTTGAGGCTGTCAAAATCAAGAAGATCAGCACTAAACAAAGACAATCTCTCTTTAGCTCCTTCTAAGTTCTTCAAATGAGCATTCTTTTGGTCATCTGGGTTTCTAACGGTTCCTCTGACAGTGTAGCCCTTCTCAAGAAGAAGCTTTACAAGCCATGAAGCAATGAAGCCGCCGGCGCCGGTGACACACACAATTTCGCCGGAGACTGCAGAGGTATCAATCGGCATAGTGGTGGATTTGAAAAAAGAAAAATTGAAAGAGAATGAGAGAAAGTTGAAAGAAGAGATGACTAATAACTGA

mRNA sequence

ATGATGATCATCGGTCACCGGAGACGCAGTGTGGAAAACACCATGACAACCCATAATGGCTGCTTTGAGGCTCCCTTCTCAAGAAGAAGCTTTACAAGCCATGAAGCAATGAAGCCGCCGGCGCCGGTGACACACACAATTTCGCCGGAGACTGCAGAGGTATCAATCGGCATAGTGGTGGATTTGAAAAAAGAAAAATTGAAAGAGAATGAGAGAAAGTTGAAAGAAGAGATGACTAATAACTGA

Coding sequence (CDS)

ATGATGATCATCGGTCACCGGAGACGCAGTGTGGAAAACACCATGACAACCCATAATGGCTGCTTTGAGGCTCCCTTCTCAAGAAGAAGCTTTACAAGCCATGAAGCAATGAAGCCGCCGGCGCCGGTGACACACACAATTTCGCCGGAGACTGCAGAGGTATCAATCGGCATAGTGGTGGATTTGAAAAAAGAAAAATTGAAAGAGAATGAGAGAAAGTTGAAAGAAGAGATGACTAATAACTGA

Protein sequence

MMIIGHRRRSVENTMTTHNGCFEAPFSRRSFTSHEAMKPPAPVTHTISPETAEVSIGIVVDLKKEKLKENERKLKEEMTNN

Homology

The following BLAST results are available for this feature:

BLAST of CcUC10G198140 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G198140 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G198140 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC10G198140 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G198140.1	CcUC10G198140.1	mRNA