CcUC10G197290 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197290
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein RETICULATA-RELATED 4, chloroplastic-like
Location	CicolChr10: 23872685 .. 23882737 (-)
RNA-Seq Expression	CcUC10G197290
Synteny	CcUC10G197290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTTCAAATGTTGGGTACATTTCTCTATTTGGACTATGACATCAAAAATGAACTACTCCAGTCGTAGTGAAAAAAAGTTTGATCCCACCTCTCCACGACGCAATTGTTGTCCTCAAAGTTTATATATATATATATATATAAATGTATGTATTAGGAAGTGAAAATGTAAGAATTGGAATTTACAAAGTTAACAATAGAAAGAAATGTGTGAATTGAAGTGAAGTATGGTTCCGTTGTCTTCTTTCGAGTGAGTATCAATCTCTCTGTTTATTTCAGCACTTTCTCAGCCACAACAAACAGAGACCCTTTCCATATCCCAATCTCGCTTTTTCTCTCTCTCTCTCTCAAGATTCTCCCGGCAAGAAATGGCGATCCAGAATTTCACTAATCTCTCCACTCCGCCGCCGTTTCTCCGCCGTTCACCTCCGCACAATTTTGCTTACATTCTCACCTCCGCTCCCTCTCTCCGCCTCCACCCCTCCCTCTCTTTCGCCGCAACTTCTCCCCTTCGCCCTTGCCGCGGTCTCAGAATCTCCGTCGCATTCGCCTCATCCGACGGGATTCCCCCCGGAGGTCATGGTGGAGGCGGCGGAGGCGGCGGCGAAGGACACGGAGAAGGCGGTGAGGAGGAGGAGGAGGAGGACCGGGAGAAGAACAGGGAGGAGGCGATTGTGGTGCTGGCGGAGGCCGGGAGGTCGACGGAGAGCCTGCCGAAGGATCTGGCAGCGGCGATTGCGGCAGGGAGAGTGCCGGCGGTGATCGTGGAGAGGTTCTTGGAGTTGGAGAAATCGGCGGTGTTGCGGTGGTTGCTGCAGTTCGGCGGATTTAAAGAACGGCTTCTGGCGGACGATTTGTTCTTGGCTAAGGTCGCCATGGAATGTGGCGTTGGAATTTTCACAAAGGTCTTTATCTCTTTTTCTTTTTCAAATTACCTTCACTTTCTTAATTTTGGTAAATTATCAAATTTTCTAAATTACAACATTTCAATTTTGTTCCTGTCTGTCCTTTTGAATTTAGTATTTGCACTTTTTAATTGTTTTAAATATTAAAAACATTGTAAGTATTTTTAAATATAATAAAATGTTAATATTGTTAGTGGTGGAGTGATAGAAACATATAAAGACATATAGATGTCTATTAATGTACAATAATATTTTACTATATTTGATAATTTTTTTTTTGTTTTGCTATATTTGGAAACAACTCTTTCAAAACTTTTAACTTAATTTATGTAATTTTAATAAAGAACAAAATAGTCTTTACCTCTCCATGTTTGAAAATGGTTATAAATAGTTTTGAATCTAATTGTTTTTTTAAGTTCAACGATTAATAAGTGGAAGATTTGAAACTTAATTTATTAGATAATACATATATATGTAAGTTTTGTAAACATGTTAATTTTAAATGGTCACAAGTTAAAGTTGACGTTAGTTTACAAGTATCATAGGAAGTAAATATATGGAGTTCTTATTTAATATGATAATGAAAGACGAGACCTATGAAATTTGACCATATGTAAGAACTAGATCACAATTTTTAAAATTACAGAAATTAAATTGAATAGAAAAAATTGGAAGTTTTAAAACTATGCTAGATTACAAGTTTAATTCACAAAACTTTAAGTTTGTGTTTATTAAGCCACTAGATTTTAAAAATGTGTAGATTTTCAAATTTTGAATCTTGTAACCAATTGATTCCTAGAGTTTCAAATTTTTATTTAATATATCCATCACATGTTTAACATTTTTTAAAATTCATAGACTTACTATGCACAAAATTAAAATTTTAGAATCTCATTGGATATAAAGTTTAATTATGCATCAATTCAATCTATTAATGTTAGAAAAAAATTGAATATGTTTGCAACTTATTAGATACAAAGTTGAAAATTCAATAACCTATTAGACACTCTCCAAAATTTAGAGATTAAATAAACACAAAATTAGAAATTTAGGTATATGTTGGGGTTGTTTTCAAATATAGAAAAATGAACTAAAATATTTACAAGTATAGCAAAATTTCACTATCTATTTACGATAAACTGCTATTTGTGTCGGTCTATTATAATAGACACATAAATTAGTCTAGTGCAGTCTAGTGTAGATAGACTGTGATATTTTACTATTATTTATAAATATTTTTAATAATTTTATCATTTTAAATAATTCCTAGATAAGTTATTCAAATCGGAATAACTGGATTTATAATTTAACCATAATTATCATTAACTACATAATTCCTATCAATAAAGGTGATAACTGTTAGGATGTGAATTGTTTTCTTCAAAAAGAACATATTTTAAAATGATGTGCGTCGTCATAAGTTATTACAAATTAATATATTTCTAGTACAATAATTACTATTGTTATTACAAATTCATGTTTTTTAGTACAATAATTATAGTTGAAAATTGAACTTTTAATTTTGAGAGAAGAGGTCAATGCTAATTATTACTAAGTTAACTTTACTTTATAGTTATTAAAAATTAATCAACCTTAATCAAGTGTGTTTAAATGATCACACACAAAATAATTTTTGTCAAAATTTTCTTTTCAATCATATATATTTTTAGTGTTGTAATTAAATTCATTAATTAAAAAAAATAATGTATCATCAAAATATAATTTATGCATTGAGATGAAAGCATATTTTTAGAAGAGATGTTTTCAAAAATAAAAAAACTATTGAAAATAATTACATATATAACAAAATTTTACTTTCTATCTACAATAGACTGCGATAGACTAAGATAAACATCTATTTGCGTTTATCACTAAAGTGATAGATGTATATTTGAGTCTATAGCGGTTGTTACAAATAGAATGTAAAATTTTGCTATATTCGTAAATAGTTTGATATTTTTTCTATCGGTAATAATTTTCCTTTTGATTTATAATTCAATGAACAAAAAATATAGTTGAAAAAATTAGAGAAAAAATATCATGACCTTATCAGAAGATATTAACCTTAAGTTGTCAGCTTCATGATTCTAAAGTTTATTTAATATCGAAATTAATATCTGCAATGCAATTACTGTTTTTTTTTTTTTTTGGTAATTTGTGGCTAATTATGAGTATTTTTGTGATTGGACAAGATACTACTAGAGTGTGTTTTGTTGCTACTTTAGTGAGATTTTGAGCACTTTGTTGTTAAATTGAATTTCCAGCTTGTTTTTTTCCACTAGATTTTGATTCGATTTTATATGGATCGTTTTATTAAGAAAATTATTTCAAAGGAGTATTCATTTAAAAAAGATAAAAAGAAACTACATAAAACTATTTAAAACAATTAAAATTTTTTTTTTTGAAACGTTACATAAAGTTCTAATATTTCAAAACTAATATAACTGTTATTTTTAAGACTGCTGCTGAGTTGGAGAAACGCAAGGAAAACTTTAGCAAGGAGCTGGATTTTGTTTGTGCTGACGTGGTATGTGCTCTCATTTAAACCTTCATACTTTTTATTTTATTTTAAAAAGTTTAGTTTTCTATCATCACGTTTTTATTTTGGTTAAAAGGTTAAATTTATTTTTTAAAAAAGAAGAAGAAGAATACTCTCAATGGCTTGATTTCCGTTAAAACTCCAAATTTTGACCAACAAGAAAGATTTTTTTCCAAAAGAATCAATAAAAGATTTGTCTCTACGTTTGGTGCATACCATGAATGAAAGAACATAAAATTGAGGACATGAGATTGAAATGAGAAAGACGATACAAAAATATAGCAAATGCATACGTATGTCTTTACTTCTATAAAATATATGTTAAGATTGCAAATACAAACTCTTTGTCTAAGAATTTTGCGACAAAAGCGTAAAATGGTTGTTTTTAAATAAATTTTAAACTTCAAATGTTAAAATGAAAATTTCAAAGTTAGAGAATATAATTAAAACTCAACCTATAGTTGAAGGGTATTTTTAATAATTTAACATTGTTTAAAATTTATAACCAATCAACTTTTAGCTTTGAAAAATTTTCAATTATATTTGGTAATGTATTTAGCTTTCAAAATAGTTGAACTTGAGAGGAGATCTGAATTATATTTAATAACATTCTTTTTATTATGCCGTTAGATTTGAAATTTATTGCAGAAGAAAAACTTTTGAAGAGTTTTTTTTTTTTTTTTTTTTTTTCAAAGTAAGATATATATAGATAATGTACATACACTTGATGGATAAAAGGAGACATACGTGATTTTAGTTACAACATCATTCTAACGGTTGATGTATGTAAAACTTGATTATGTAAAAAATTTTAACGATATTTTTTAATCGGTAATAATTAACAATACCATAATTAATCTTTCAAACAAACAAAATTATATAGACCTCCTATATAATATTACATAGACAAATAATTTTATAAAAGACCTGGGTGTAGCTCAACTCGACTAATACCCAATGGAATTGTGCTACGTGACACATTTTTTATTAATTTGTTTTTTTTTTTTTTAGTAAAAGAAAGGAAGATATAGAAATAGGTGCCACCTAATAAATTTCCCTCGTGCAAGTATCTAATCACTTTCTCACCAACATTCATCTCTTCGCATCAGTCGCAAATTGTTGTCCTCGTCGTTAACAATGAGTTGAATTTCATAAATGTTTACATGATGTTTTCAATGAAGGGAGCTAGCTCTCTTGCCACGATTGTAAATTTAGAATGTTTTTCATAATGGTTAATTTTAACGACAAACATAAACACTTATTTTCTATACCTAACAATCTAATAAGTCAACTATTGATTGGAATGATATCACAAGATAGGACATGTTTAGTAAACAATCTGAATTCTGTTTCACTAAGTAGTAAATATGTGTTTGGTAGGCAATTTATATTTTGTTTTTAAAAATTGTTTTTAGATTATGTGATCTAAATAATGCAAATTCTGTAAACAAATTTTTAATATTTTTAGTGCATCCCTATTTTGAATCAAAGTTAAAATATATGATTATATTACAAAATAATCATTATAAAAAATTTTCAACATAAAACATACCCATAAATTAATAATTTATAGTTCATATTCAACTTGATGATTTATACATATATTATCAAACATATCTTAAATAATTAGATCGAAATCTAATTTCTAAATATGCTACACATATATAAAGACATAAGATAGAATCTTCATTTTCAAAGTTCTGCTTTTAAATTGCCTACCGAAAGGCCCCAAAAAATTTGCAACATCATACTAGGAAAAGAAACCCATTCAAAGAGTAAATTTGAAAAATATAAAAAGCACTCAAATTGATTTTGTTTTTAGTTTATTATTTTTGAAATTACTTATTAGAGTAAATTTGAAAAATATAAAAAGCACTCAAATTGATTTTGTTTTTAGTTTATTATTTTTGAAATTACTTATTTTCTCATAATTCTATACTATGATTCTCACATCTTTGAAAAAAAAAACATTAGAGTTCTAATCAGGTTCTAAAAATAAGATTTTTTTAAGTTCTAAAATTTGGTTTGGTTTGGTTTTTTACAATATTGGTGGAAGTAATATTTATAAGCTTCATTTTAAAAGTTGATATACGATCGTGATTTTTTGTTTTTTATTTTGTAAATTCATTTTTCTTAAATGAATATTTGAATTATTAATCAAATGAAAAAGAATTGAAGTTTTTTTTGTTTTTGAATTTTTAAATCTTAGCTAAATTTTTTAAGACACTGAATAAAAAAATAGAGTAGTATTTATAAATTTAATTTAAAATGGTTATGAAATAGAAGTAAATAACTACTGTATGTTGTTCTCAAAAAAAAGAAAAAAAAACTACTATTATTTTGTTTTAAGCCCTTGAATTTTGGGTTCTCAAAAAGAAAAAAAAATTCAAGTAATTTCGCAATTCTCAATAATTTTTATTTTTGTTTCTTTCTTCAACTATAAAAAAAAAGGGAAAAATAGCTTTGTTGTGCCTACATTTTAGGTTAATTTTCATTTGGTCAAAATGGTACCTTTCTAATCTCTTAAGTTTTCTTATTGTGCTACTCTACTCCTAGAGCGGTAAAAAGATAAGAAAATACGAAGCGTTTTCTTAGTTTTCCAACCTCTTGCTTCTAAAGGTTGTCCTCTCTCGGCTGGATGTTGGTTCAGCCTACTACGAGGATCCCGTATCTAGCAACCCAACCTAAAAAAAGGGCATAAAAAAGCCTTATCTAAGTTGGAACAATGAAGCTGACCTTATTATTCAAAGGGTTTTTTAAGCTGGTGCACAGGAGCACACTTCTGTTTGTCCTTTACTAGACTTGGAAAATGGTAAAACAAAAACTTAAAACTAATTTTAATAATATGAAAAAGGAAAATTATTTTAAATGAAAAAACTATTGAAAATATTTACAAATAATAGTAAACTATCACAATTTATTCGCGAGAGATCATGATAGATTACTATCTGTGTCAATTTTGACACAAACAGATAAACATAGTAGTTTATCGCGGTCTATCGCACATAAACACTAAAATTTAGTTATATTTATAAATATATTGGTTTATTTTTATATATTTAAAAATAGCCCTACGAAAAATAGTCTACTTACTTAATTATAATTATTTTTAATTGTTTTAAAATGAGGTTTGAGTTTTGTTTTATTATTATTATTTTTGTTGAATGAAACACAGATAATGGCCATCATAGCGGATTTCATGCTTGTTTGGCTTCCAGCTCCCACCGTCTCTCTCAAACCTCCTCTAGCAGTCAGTGCTGGACTTCTCACCAAGTTCTTCTATGGCTGCCCTGAAAACGCCTTCCAGGTAACTTTACCCTCAAACCCAAATAAACATTCCACAATTTCCCTTCTATACAACATTCTACTGTCTCAATGTGAGAACCCATGTCAGAACTTTTTATTATTTCATTCTTCATATGGGCATTTTAGTGTTTTTGAGATGAACACCAGGTGTTCGATTAAATTCTCAAATGAAATTCTCGATCTTCAGGTCGCTTTGGCGGGTACCTCGTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGGTATGTGGTGTGTGTTTCAGCTGAATTTCTTGAGTAATTTGAATGTTTACTTAACTTAAACGTGATTTCATTTGATAATTTGCAGCGTAATGGGGCTAAACTATTTGCTGTAGGAAGTAGTGCATCTGTGGTAAGCCAGTTGTTTCTCCCCGCTTTTGTTCTGCCTTTGGCTTCATTTAAGCAATGTTGCCTCTTAACTTTAATTCGGTGCTGTCAGTGCATTATGTGTTTGAAATACGACCAAAGTCCCACATTGGTTAGATAAGGAGATGATCATGAGTATATATGTAAAGACAACTATATCCATTGGTACGAGATTTTTTGAGTGGAACCAAAAGCAAAGCCACAAGGATTTATGCCCAAAGTGGAGAAGATAGGTAGAGGTCTCCTGGTTCTTATCAAGTAATATCTGAGTCATGCCCCTGACTTAGCCATGTCGGTAGAATCCTCAGGTGCCGAATAAAGATGTAATGGAACCTCGAAAGTAGTCATGGTGCGATTCGTAGTTGAACTCTATTAGATAGGTGGTGTGCTCTAGCGAAGAGGAGTTAGCTTAGATAAGAGTTGGATGGATGGATGACTATTTGAGGGGAGGGTTAGTGGTCTTTTGTTCGAGGGGAGGATCGTTAAGAATGCAACCAAAGTCCCACATTGGTTAGATAAGGGGATGATCATGGGTATATAAGTGAGAGCAACTATCTCCATTAATCTGAGGCCTTTTCGGGTGAAACCAAAAGCAAAACCATGAGAGTTTATGCCCAAAGTGGACCATATCATACTTTATGGAGATATTTAGAAGGTTGTTGTCCCTAACATTATGGTCTGTGGTAACATGTGGAATCTCGTTTACACAAACTTTAGATGGTTGAATTGAATTTGGTATTGGAACATTTTTTATACTAAGGTCAATATCAGTACCTATACTTTTGTACCACATGCATATGCTCAGTTTTGGTTTTGTACTTGTTCTGAACTTCCTATCTCTTAAAATTCACCAGTAATGAAGTCATTTATAAGTGCACCTCTGATAAGCCAGATCCTTTCCAGTTAGTTATGCTTTTGGCTTGGCTTAAGCAATTCTCTTGCCTCTTAAACATATTCAATACTTTCTTTTGGAATCTTGATGACAAAAACTTCGGATCATGTAAAAGTTTGTGGTTTCTAACAGTATAGTTGGATATTTTCATGTCAGTGCCTGTACTTTTATGTGATATGCACACAATCCTTGTTGTTTTTGCACTTTTTCTGAACTCTGTGTATCTATTAAAGAAATAGTAATGAAGTAATTTGTTTCACAAGAAATCAAATGAAGATACATGGCGTTTATTTGATATTGAAAACATTGCTCGACTTATTGATGTGTAGAGGGAAACTTAGGCCTTATGGACCCTGTATTTCAGGTGGGTACGGGTATAACAAACACCTTGATAAATATAAGGAAGTTCTTCGACAAATCATATGCCATGGAAGCAGAGGATGTGCCTGTACTAGCAACAAGTATTGGCTATGGAGTATACATGTCGGTTTCTAGCAACCTAAGGTACTGCAAATTTCTTCACTTCAATGTGTGATATTTGGTTCTTTTACACTATGGTTATTGCACTTTATTTCTGGTATAAAATTTCTGCTCGGTAACCATACATATTCGATGTTTGTATCAAAGAGTAGTTATTACTTATTATCATGTGTTAGACCTATTAGAACCCAATATTGTTAAGGTCTTGTCTGGTAACTATCTAGTTTTTGGTTTTTGAAAATTTAGCTTACTTCCACCTATTGATTCATTGTTTTATTGTTATACTTTTTACGATTGTTTTCAAAATTAGACTGCTAAATGAGTTACAACACGCTTGTAAGAGTATTAAGATAAAATGAGGGAGGAGACAATGTAGTAGTAATTTGAACTTACAACCTTTACCATATCTCCAAACATAAAAGCTTAAACAAATAGAATAACGTATATCACCTCTTAAGAGTGGCCATCATTTTAAGGTTAGGATGTTGGGAGATACCAAATAGGAAAGTTATTGAGGTAGTAAGAAATATTATTAGGATAGTTAGGGCATATTTGTTTTTAGCCCAGGAATTAGTTATTAATTTGATGGGGCAAGATGAGATGATGCAGCAGCTTAGCTTAGTGGATTTAGGTTTGATTGATCTCGAGGAGATTTCACTTTCATGTAGAGTAGGAAAAAAAAACTTGTTGGGTCGAAGAATCGCCGGTTTGACCAGGGAGTCTCTAGCTAGGGACAAGGCATGGATGAGGAGAGTATCCCAACCCCATCCCCAATCTCGAATTTGCCTCATTTAGGTTTTCTACTTTGGGGCTTTCTTTTCTTAACACATTATGTTCAAAGAGTTTCACATAAATAAGTGACCTAATAACCACATAAATTTATCAAACTCGCTACCCAATGGAATTTATCATTTTACCCTTCTAATGTCAATCCTCTAATGTGAATCCTTCTTCACTGTAACAACGAACTCTTTAGCGATGAAATAATTCTCTGCTTTGATTAGATACCAAGTACTTGCGGGAGTAATAGAGCAAAGAATGCTAGAGCCTTTGCTGCACAAACACAAGTTGGCATTGAGTGCAATCTGCTTTGTGGTTCGAACTGGCAACACTTTCTTGGGATCATTGATGTAAGATTTCTTCATTAGCCTTAAACTCCTCAAAACCTTGTTGCATTCTTTTCAAACTCCTGGCTTCTCTGAAAAACTTTTGTGAATTTTATTTTTCCTCCCTTTTTCCAGGTGGGTGGATTTTGCAAGATGGACAGGGATTCAAAGAACGAGAGAGTAGAGCGGGAAAAAAAAAATACACTTTTGTTCGAGAAATTATTCGACAAGGTTAGTATAACATAATCCGTCGAGGCTATTTTTCGAGTTTTATTATTGAAATATTAAGGCATATGGTGGTAGATGATTGTTGGGGTGTTTCCATTGAAGCATCGGGTTGTATGATTGTTTATTTGCACACATTATTATTTTTTGAAGTGTCAGAATGAAGAAAAATAATTCGTTCCATTTTGAGTATTAATATATTGAAGTATGAAAC

mRNA sequence

CTTTGTTTCAAATGTTGGGTACATTTCTCTATTTGGACTATGACATCAAAAATGAACTACTCCAGTCGTAGTGAAAAAAAGTTTGATCCCACCTCTCCACGACGCAATTGTTGTCCTCAAAGTTTATATATATATATATATATAAATGTATGTATTAGGAAGTGAAAATGTAAGAATTGGAATTTACAAAGTTAACAATAGAAAGAAATGTGTGAATTGAAGTGAAGTATGGTTCCGTTGTCTTCTTTCGAGTGAGTATCAATCTCTCTGTTTATTTCAGCACTTTCTCAGCCACAACAAACAGAGACCCTTTCCATATCCCAATCTCGCTTTTTCTCTCTCTCTCTCTCAAGATTCTCCCGGCAAGAAATGGCGATCCAGAATTTCACTAATCTCTCCACTCCGCCGCCGTTTCTCCGCCGTTCACCTCCGCACAATTTTGCTTACATTCTCACCTCCGCTCCCTCTCTCCGCCTCCACCCCTCCCTCTCTTTCGCCGCAACTTCTCCCCTTCGCCCTTGCCGCGGTCTCAGAATCTCCGTCGCATTCGCCTCATCCGACGGGATTCCCCCCGGAGGTCATGGTGGAGGCGGCGGAGGCGGCGGCGAAGGACACGGAGAAGGCGGTGAGGAGGAGGAGGAGGAGGACCGGGAGAAGAACAGGGAGGAGGCGATTGTGGTGCTGGCGGAGGCCGGGAGGTCGACGGAGAGCCTGCCGAAGGATCTGGCAGCGGCGATTGCGGCAGGGAGAGTGCCGGCGGTGATCGTGGAGAGGTTCTTGGAGTTGGAGAAATCGGCGGTGTTGCGGTGGTTGCTGCAGTTCGGCGGATTTAAAGAACGGCTTCTGGCGGACGATTTGTTCTTGGCTAAGGTCGCCATGGAATGTGGCGTTGGAATTTTCACAAAGACTGCTGCTGAGTTGGAGAAACGCAAGGAAAACTTTAGCAAGGAGCTGGATTTTGTTTGTGCTGACGTGATAATGGCCATCATAGCGGATTTCATGCTTGTTTGGCTTCCAGCTCCCACCGTCTCTCTCAAACCTCCTCTAGCAGTCAGTGCTGGACTTCTCACCAAGTTCTTCTATGGCTGCCCTGAAAACGCCTTCCAGGTCGCTTTGGCGGGTACCTCGTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGCGTAATGGGGCTAAACTATTTGCTGTAGGAAGTAGTGCATCTGTGGTGGGTACGGGTATAACAAACACCTTGATAAATATAAGGAAGTTCTTCGACAAATCATATGCCATGGAAGCAGAGGATGTGCCTGTACTAGCAACAAGTATTGGCTATGGAGTATACATGTCGGTTTCTAGCAACCTAAGATACCAAGTACTTGCGGGAGTAATAGAGCAAAGAATGCTAGAGCCTTTGCTGCACAAACACAAGTTGGCATTGAGTGCAATCTGCTTTGTGGTTCGAACTGGCAACACTTTCTTGGGATCATTGATGTGGGTGGATTTTGCAAGATGGACAGGGATTCAAAGAACGAGAGAGTAGAGCGGGAAAAAAAAAATACACTTTTGTTCGAGAAATTATTCGACAAGGTTAGTATAACATAATCCGTCGAGGCTATTTTTCGAGTTTTATTATTGAAATATTAAGGCATATGGTGGTAGATGATTGTTGGGGTGTTTCCATTGAAGCATCGGGTTGTATGATTGTTTATTTGCACACATTATTATTTTTTGAAGTGTCAGAATGAAGAAAAATAATTCGTTCCATTTTGAGTATTAATATATTGAAGTATGAAAC

Coding sequence (CDS)

ATGGCGATCCAGAATTTCACTAATCTCTCCACTCCGCCGCCGTTTCTCCGCCGTTCACCTCCGCACAATTTTGCTTACATTCTCACCTCCGCTCCCTCTCTCCGCCTCCACCCCTCCCTCTCTTTCGCCGCAACTTCTCCCCTTCGCCCTTGCCGCGGTCTCAGAATCTCCGTCGCATTCGCCTCATCCGACGGGATTCCCCCCGGAGGTCATGGTGGAGGCGGCGGAGGCGGCGGCGAAGGACACGGAGAAGGCGGTGAGGAGGAGGAGGAGGAGGACCGGGAGAAGAACAGGGAGGAGGCGATTGTGGTGCTGGCGGAGGCCGGGAGGTCGACGGAGAGCCTGCCGAAGGATCTGGCAGCGGCGATTGCGGCAGGGAGAGTGCCGGCGGTGATCGTGGAGAGGTTCTTGGAGTTGGAGAAATCGGCGGTGTTGCGGTGGTTGCTGCAGTTCGGCGGATTTAAAGAACGGCTTCTGGCGGACGATTTGTTCTTGGCTAAGGTCGCCATGGAATGTGGCGTTGGAATTTTCACAAAGACTGCTGCTGAGTTGGAGAAACGCAAGGAAAACTTTAGCAAGGAGCTGGATTTTGTTTGTGCTGACGTGATAATGGCCATCATAGCGGATTTCATGCTTGTTTGGCTTCCAGCTCCCACCGTCTCTCTCAAACCTCCTCTAGCAGTCAGTGCTGGACTTCTCACCAAGTTCTTCTATGGCTGCCCTGAAAACGCCTTCCAGGTCGCTTTGGCGGGTACCTCGTTTTCGTTTCTTCAGAGAGTTGGTGCTGTGGTGCGTAATGGGGCTAAACTATTTGCTGTAGGAAGTAGTGCATCTGTGGTGGGTACGGGTATAACAAACACCTTGATAAATATAAGGAAGTTCTTCGACAAATCATATGCCATGGAAGCAGAGGATGTGCCTGTACTAGCAACAAGTATTGGCTATGGAGTATACATGTCGGTTTCTAGCAACCTAAGATACCAAGTACTTGCGGGAGTAATAGAGCAAAGAATGCTAGAGCCTTTGCTGCACAAACACAAGTTGGCATTGAGTGCAATCTGCTTTGTGGTTCGAACTGGCAACACTTTCTTGGGATCATTGATGTGGGTGGATTTTGCAAGATGGACAGGGATTCAAAGAACGAGAGAGTAG

Protein sequence

MAIQNFTNLSTPPPFLRRSPPHNFAYILTSAPSLRLHPSLSFAATSPLRPCRGLRISVAFASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKFFDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQRTRE

Homology

[Close]

BLAST of CcUC10G197290 vs. NCBI nr
Match: XP_008461823.1 (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo] >KAA0048393.1 protein RETICULATA-RELATED 4 [Cucumis melo var. makuwa])

HSP 1 Score: 635.6 bits (1638), Expect = 2.8e-178
Identity = 345/389 (88.69%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPP-HNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLR 60
           MAI+NF+NLS PPPFL  SPP  NF YILT    S PSLRL P+     TSPLRP R LR
Sbjct: 1   MAIRNFSNLSIPPPFLSPSPPTPNFTYILTSPTHSPPSLRLAPT-----TSPLRPRRTLR 60

Query: 61  ISVAFASSDG-IPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           IS+AFASSDG IPPGGH  G GGGG GHG+GGEEEEEEDREKNR EAI VLAEAGRS ES
Sbjct: 61  ISLAFASSDGTIPPGGH--GSGGGGHGHGDGGEEEEEEDREKNRAEAIAVLAEAGRSIES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLA AIAAGRVPAVIVERFLELEKSA LRWL+QFGGFKER+LADDLFLAKVAMECGV
Sbjct: 121 LPKDLAGAIAAGRVPAVIVERFLELEKSAALRWLMQFGGFKERVLADDLFLAKVAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKP LA+SAG LT
Sbjct: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPALAISAGPLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGS ASVVGTGITNTLINIRKF
Sbjct: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNTLINIRKF 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ++AGVIEQRMLEPLLHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQIIAGVIEQRMLEPLLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 382

[Close]

BLAST of CcUC10G197290 vs. NCBI nr
Match: XP_004149738.1 (protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN58569.1 hypothetical protein Csa_001009 [Cucumis sativus])

HSP 1 Score: 632.9 bits (1631), Expect = 1.8e-177
Identity = 344/389 (88.43%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPP-HNFAYILTS----APSLRLHPSLSFAATSPLRPCRGLR 60
           MAI+N TNLS PPPFL RSPP  NF YILTS     PSLRL      A TSPLRP R LR
Sbjct: 1   MAIRNITNLSIPPPFLSRSPPTPNFIYILTSPTHTPPSLRL-----AATTSPLRPRRTLR 60

Query: 61  ISVAFASSDG-IPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           IS+AFASSDG IPPGGH  GGGGGG+GHG+GG EE EEDREKNR EA VVLAEAGRSTES
Sbjct: 61  ISLAFASSDGTIPPGGH--GGGGGGDGHGDGGGEEGEEDREKNRAEAFVVLAEAGRSTES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLA AIAAGRVPAVIVERFLELEKSAVLRWL+QFGGFKER+LADDLFLAKVAMECGV
Sbjct: 121 LPKDLAGAIAAGRVPAVIVERFLELEKSAVLRWLMQFGGFKERVLADDLFLAKVAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRK+NF+KELDFVCADVIMAI+ADFMLVWLPAPTVSLKP LA+SAG LT
Sbjct: 181 GIFTKTAAELEKRKDNFNKELDFVCADVIMAIVADFMLVWLPAPTVSLKPALAISAGPLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGS ASVVGTGITNTLINIRKF
Sbjct: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNTLINIRKF 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ++AGVIEQR+LEPLLHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQIIAGVIEQRILEPLLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 382

[Close]

BLAST of CcUC10G197290 vs. NCBI nr
Match: XP_023526496.1 (protein RETICULATA-RELATED 4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625.9 bits (1613), Expect = 2.2e-175
Identity = 339/387 (87.60%), Postives = 351/387 (90.70%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPPHNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLRI 60
           MAI+NFTNLSTP PFLRRSPP NF YILT    +APSLR H        SP R  R L I
Sbjct: 1   MAIRNFTNLSTPSPFLRRSPPLNFTYILTCRTCTAPSLRFH--------SPRRR-RSLGI 60

Query: 61  SVAFASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTESLP 120
           SVAFASS GIPPGGH GGGGGGG G G+G E  EEEDREKNR EAI VLAEAGRSTESLP
Sbjct: 61  SVAFASSGGIPPGGHDGGGGGGG-GGGDGHEGGEEEDREKNRAEAIAVLAEAGRSTESLP 120

Query: 121 KDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGVGI 180
           KDLAAAIAAGRVPAVIVERFLE+EKSAVLRWL+QFGGFKERLLADDLFLAK+AMECGVGI
Sbjct: 121 KDLAAAIAAGRVPAVIVERFLEMEKSAVLRWLMQFGGFKERLLADDLFLAKMAMECGVGI 180

Query: 181 FTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTKF 240
           FTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKPPLA+SAGLLTK 
Sbjct: 181 FTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPPLAISAGLLTKL 240

Query: 241 FYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKFFD 300
           FYGCPENAFQVA AGTS+SFLQRVGAVVRNGAKLFAVGS ASVVGTGITN+LIN+RK FD
Sbjct: 241 FYGCPENAFQVAFAGTSYSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNSLINVRKLFD 300

Query: 301 KSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAICFV 360
           KSYAMEAEDVPVLATSIGYG YMSVSSNLRYQ+LAGVIEQRMLEPLLHKHKLALSAICF 
Sbjct: 301 KSYAMEAEDVPVLATSIGYGTYMSVSSNLRYQILAGVIEQRMLEPLLHKHKLALSAICFA 360

Query: 361 VRTGNTFLGSLMWVDFARWTGIQRTRE 384
           VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 VRTGNTFLGSLMWVDFARWTGIQRTRE 377

[Close]

BLAST of CcUC10G197290 vs. NCBI nr
Match: KAG6581562.1 (Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 625.9 bits (1613), Expect = 2.2e-175
Identity = 338/387 (87.34%), Postives = 349/387 (90.18%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPPHNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLRI 60
           MAI+NFTNLSTP PFLRRSPP NF YILT    +APSLR H        SP R  R L I
Sbjct: 1   MAIRNFTNLSTPSPFLRRSPPLNFTYILTCRTCTAPSLRFH--------SPRRR-RSLGI 60

Query: 61  SVAFASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTESLP 120
           SVAFASS GIPPGGH GGGGGGG G G G E  EEEDREKNR EAI VLAEAGRSTESLP
Sbjct: 61  SVAFASSGGIPPGGHDGGGGGGGGGGGGGHEGGEEEDREKNRAEAIAVLAEAGRSTESLP 120

Query: 121 KDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGVGI 180
           KDLAAAIAAGRVP VIVERFLE+EKSAVLRWL+QFGGFKERLLADDLFLAK+AMECGVGI
Sbjct: 121 KDLAAAIAAGRVPGVIVERFLEMEKSAVLRWLMQFGGFKERLLADDLFLAKMAMECGVGI 180

Query: 181 FTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTKF 240
           FTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKPPLA+SAGLLTK 
Sbjct: 181 FTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPPLAISAGLLTKL 240

Query: 241 FYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKFFD 300
           FYGCPENAFQVA AGTS+SFLQRVGAVVRNGAKLFAVGS ASVVGTGITN+LIN+RK FD
Sbjct: 241 FYGCPENAFQVAFAGTSYSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNSLINVRKLFD 300

Query: 301 KSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAICFV 360
           KSYAMEAEDVPVLATSIGYG YMSVSSNLRYQ+LAGVIEQRMLEPLLHKHKLALSAICF 
Sbjct: 301 KSYAMEAEDVPVLATSIGYGTYMSVSSNLRYQILAGVIEQRMLEPLLHKHKLALSAICFA 360

Query: 361 VRTGNTFLGSLMWVDFARWTGIQRTRE 384
           VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 VRTGNTFLGSLMWVDFARWTGIQRTRE 378

[Close]

BLAST of CcUC10G197290 vs. NCBI nr
Match: XP_022934115.1 (protein RETICULATA-RELATED 4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 622.9 bits (1605), Expect = 1.9e-174
Identity = 339/388 (87.37%), Postives = 350/388 (90.21%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPPHNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLRI 60
           MAI+NFTNLSTP PFLRRSPP NF YILT    +APSLR H        SP R  R L I
Sbjct: 1   MAIRNFTNLSTPSPFLRRSPPLNFTYILTCRTCAAPSLRFH--------SPRRR-RSLGI 60

Query: 61  SVAFASSDGIPPGGHGGGGGGGGEGHG-EGGEEEEEEDREKNREEAIVVLAEAGRSTESL 120
           SVAFASS GIPPGGH GGGGGGG G G EGG   EEEDREKNR EAI VLAEAGRSTESL
Sbjct: 61  SVAFASSGGIPPGGHDGGGGGGGGGGGHEGG---EEEDREKNRAEAIAVLAEAGRSTESL 120

Query: 121 PKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGVG 180
           PKDLAAAIAAGRVP VIVERFLE+EKSAVLRWL+QFGGFKERLLADDLFLAK+AMECGVG
Sbjct: 121 PKDLAAAIAAGRVPGVIVERFLEMEKSAVLRWLMQFGGFKERLLADDLFLAKMAMECGVG 180

Query: 181 IFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTK 240
           IFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKPPLA+SAGLLTK
Sbjct: 181 IFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPPLAISAGLLTK 240

Query: 241 FFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKFF 300
            FYGCPENAFQVA AGTS+SFLQRVGAVVRNGAKLFAVGS ASVVGTGITN+LIN+RK F
Sbjct: 241 LFYGCPENAFQVAFAGTSYSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNSLINVRKLF 300

Query: 301 DKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAICF 360
           DKSYAMEAEDVPVLATSIGYG YMSVSSNLRYQ+LAGVIEQRMLEPLLHKHKLALSAICF
Sbjct: 301 DKSYAMEAEDVPVLATSIGYGTYMSVSSNLRYQILAGVIEQRMLEPLLHKHKLALSAICF 360

Query: 361 VVRTGNTFLGSLMWVDFARWTGIQRTRE 384
            VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 AVRTGNTFLGSLMWVDFARWTGIQRTRE 376

[Close]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 6.4e-117
Identity = 219/343 (63.85%), Postives = 279/343 (81.34%), Query Frame = 0


Query: 39  SLSFAATSPLRPCRGLRISVAFASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNR 98
           S+SF    P+ P     +S +  +      GG   GGGGGG+G    G+   +EDR++NR
Sbjct: 47  SISFNRRVPITPV----LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNR 106

Query: 99  EEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERL 158
            EA+++L E+G   ESLPKDLAAAI AGR+P  ++ RFLEL+KSAV+RWL+QFGGF+ERL
Sbjct: 107 NEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERL 166

Query: 159 LADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAP 218
           LADDLF+AK+AMECGVGIFTKTAAE E+R+ENF  EL+ V ADV MAIIADFMLV+LPAP
Sbjct: 167 LADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAP 226

Query: 219 TVSLKPPLAVSAGLLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSAS 278
           TVSL+PPLA++AG ++KFF+ CP+NAFQVAL+GTS++ LQR+GA+ RNGAKLFAVG+++S
Sbjct: 227 TVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSS 286

Query: 279 VVGTGITNTLINIRKFFDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRM 338
           +VGT ITN  I  RK  D++   E E VP+++TS+ YGVYM+VSSNLRYQ++AGVIEQR+
Sbjct: 287 LVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRL 346

Query: 339 LEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQRT 382
           LEP+LH+HKLALSA+CF VRTGNTFLGSL+WVD+AR  GIQ++
Sbjct: 347 LEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKS 385

[Close]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-47
Identity = 114/291 (39.18%), Postives = 168/291 (57.73%), Query Frame = 0


Query: 97  NREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQ-FGGFK 156
           +R E   V+  AGR  ++LP+D+   +  G V   I++ F +LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 157 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWL 216
           ERLLAD  FL ++A+E  + I T   A+ EKRKENF +ELD+V  D + A + DF  VWL
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 217 PAPTVSLKPPLAVSAG-----LLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKL 276
           PAPT+S       + G      L       P+NAFQ +L G  ++   R+ +V+  G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 277 FAVGSSASVVGTGITNTLINIRKFFDKSYAM--EAEDVPVLATSIGYGVYMSVSSNLRYQ 336
             VG  +S    G +N L  IRKF      +  +A+  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 337 VLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           ++AG+IE R+ +  L    L ++ I FVVR  N++ G+  W+D AR TG+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.5e-44
Identity = 110/291 (37.80%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 97  NREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQ-FGGFK 156
           +R E   V+  AGR  ++LP D+   +  G V   +++   +LE+  ++  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 157 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWL 216
           ERLLAD  FL ++A+E  + I T   A+ EKRKENF +E+D+V  D +   + DF  VWL
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 217 PAPTVSLKPPLAVSAG-----LLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKL 276
           PAPT+S       + G      L       P+NAFQ +LAG  ++   R+ +V+  G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 277 FAVGSSASVVGTGITNTLINIRKFF--DKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ 336
             VG  +S    G +N L   RK    +   A + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 337 VLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           ++AG+IE R+ +  L    L ++AI FVVRT N++ G+  W+D AR TG+Q
Sbjct: 659 IIAGLIEHRLSDE-LSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.0e-30
Identity = 104/334 (31.14%), Postives = 170/334 (50.90%), Query Frame = 0


Query: 62  SSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAI---VVLAEAGRSTESLPKD 121
           ++DG   GG+G GGGGGG+G G+ GE+E ++  EK     +    V+ E  R   +LP+D
Sbjct: 109 NNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPED 168

Query: 122 LAAAIAAGRVPAVIVERFLELEKSAVLRWLLQF-----GGFKERLLADDLFLAKVAMECG 181
           +  A  +  +  + + R+L+L+ S    W L F        + R+LAD  FL KV  E  
Sbjct: 169 MLEAAKSVGIRKLFLLRYLDLQGSV---WPLGFLMRSCAMLRNRMLADPSFLFKVGTEVA 228

Query: 182 VGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLL 241
           +     T AE++KR E+F  E +   AD+++ ++ D  LV L AP   +  P   S GL 
Sbjct: 229 IDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLF 288

Query: 242 TKFFYGC---PENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLIN 301
                 C   P + F+    G  FS  QR+      G    +VG    ++G GI N ++ 
Sbjct: 289 KDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMT 348

Query: 302 IRKFFDKSYAMEAEDVPV---LATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHK 361
            ++   KS     EDVP+     ++  +GV++ +SSN RYQ++ G+  +R++E      +
Sbjct: 349 AKRSVKKS----EEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAKR 408

Query: 362 LALSAICFV--VRTGNTFLGSLMWVDFARWTGIQ 380
           + + A+ F   VR  N   G + +VD+A+ +G+Q
Sbjct: 409 IPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.3e-28
Identity = 108/328 (32.93%), Postives = 164/328 (50.00%), Query Frame = 0


Query: 60  FASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTESLPKDL 119
           F  SDG    G GGGGG GGEG GEG + EE+E     + E ++   EA  +T  LP D+
Sbjct: 115 FNGSDG---NGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGAT--LPSDM 174

Query: 120 AAAIAAGRVPAVIVERFLELEKSAVLRW--LLQFGGFKERLLADDLFLAKVAMECGVGIF 179
             A     +  V++ R+L+L+ SA L    +  +   + R+LAD  FL K+  E  +   
Sbjct: 175 LEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSC 234

Query: 180 TKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTKFF 239
             T AE++KR ++F  E +   AD+++  + +  LV + AP V    P A S G L +  
Sbjct: 235 CATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSA-SPGFLGRMV 294

Query: 240 Y---GCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 299
           +     P + F+    G  FS  QR+      G    AVG    +VG GI N ++  ++ 
Sbjct: 295 FAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRN 354

Query: 300 FDKSYAMEAEDVPV---LATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALS 359
            +KS     E++PV   + ++  +GV++SVSSN RYQ++ G+       P   K   A  
Sbjct: 355 INKS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAM 414

Query: 360 AICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           A    VR  N   G + +VD+AR +G Q
Sbjct: 415 AFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL
Match: A0A5A7TXM9 (Protein RETICULATA-RELATED 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001130 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178
Identity = 345/389 (88.69%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPP-HNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLR 60
           MAI+NF+NLS PPPFL  SPP  NF YILT    S PSLRL P+     TSPLRP R LR
Sbjct: 1   MAIRNFSNLSIPPPFLSPSPPTPNFTYILTSPTHSPPSLRLAPT-----TSPLRPRRTLR 60

Query: 61  ISVAFASSDG-IPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           IS+AFASSDG IPPGGH  G GGGG GHG+GGEEEEEEDREKNR EAI VLAEAGRS ES
Sbjct: 61  ISLAFASSDGTIPPGGH--GSGGGGHGHGDGGEEEEEEDREKNRAEAIAVLAEAGRSIES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLA AIAAGRVPAVIVERFLELEKSA LRWL+QFGGFKER+LADDLFLAKVAMECGV
Sbjct: 121 LPKDLAGAIAAGRVPAVIVERFLELEKSAALRWLMQFGGFKERVLADDLFLAKVAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKP LA+SAG LT
Sbjct: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPALAISAGPLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGS ASVVGTGITNTLINIRKF
Sbjct: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNTLINIRKF 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ++AGVIEQRMLEPLLHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQIIAGVIEQRMLEPLLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 382

[Close]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL
Match: A0A1S3CG26 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103500333 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.4e-178
Identity = 345/389 (88.69%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPP-HNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLR 60
           MAI+NF+NLS PPPFL  SPP  NF YILT    S PSLRL P+     TSPLRP R LR
Sbjct: 1   MAIRNFSNLSIPPPFLSPSPPTPNFTYILTSPTHSPPSLRLAPT-----TSPLRPRRTLR 60

Query: 61  ISVAFASSDG-IPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           IS+AFASSDG IPPGGH  G GGGG GHG+GGEEEEEEDREKNR EAI VLAEAGRS ES
Sbjct: 61  ISLAFASSDGTIPPGGH--GSGGGGHGHGDGGEEEEEEDREKNRAEAIAVLAEAGRSIES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLA AIAAGRVPAVIVERFLELEKSA LRWL+QFGGFKER+LADDLFLAKVAMECGV
Sbjct: 121 LPKDLAGAIAAGRVPAVIVERFLELEKSAALRWLMQFGGFKERVLADDLFLAKVAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKP LA+SAG LT
Sbjct: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPALAISAGPLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGS ASVVGTGITNTLINIRKF
Sbjct: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNTLINIRKF 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ++AGVIEQRMLEPLLHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQIIAGVIEQRMLEPLLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 382

[Close]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL
Match: A0A0A0LCC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686720 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 8.9e-178
Identity = 344/389 (88.43%), Postives = 357/389 (91.77%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPP-HNFAYILTS----APSLRLHPSLSFAATSPLRPCRGLR 60
           MAI+N TNLS PPPFL RSPP  NF YILTS     PSLRL      A TSPLRP R LR
Sbjct: 1   MAIRNITNLSIPPPFLSRSPPTPNFIYILTSPTHTPPSLRL-----AATTSPLRPRRTLR 60

Query: 61  ISVAFASSDG-IPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           IS+AFASSDG IPPGGH  GGGGGG+GHG+GG EE EEDREKNR EA VVLAEAGRSTES
Sbjct: 61  ISLAFASSDGTIPPGGH--GGGGGGDGHGDGGGEEGEEDREKNRAEAFVVLAEAGRSTES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLA AIAAGRVPAVIVERFLELEKSAVLRWL+QFGGFKER+LADDLFLAKVAMECGV
Sbjct: 121 LPKDLAGAIAAGRVPAVIVERFLELEKSAVLRWLMQFGGFKERVLADDLFLAKVAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRK+NF+KELDFVCADVIMAI+ADFMLVWLPAPTVSLKP LA+SAG LT
Sbjct: 181 GIFTKTAAELEKRKDNFNKELDFVCADVIMAIVADFMLVWLPAPTVSLKPALAISAGPLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGS ASVVGTGITNTLINIRKF
Sbjct: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNTLINIRKF 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ++AGVIEQR+LEPLLHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQIIAGVIEQRILEPLLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 382

[Close]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL
Match: A0A6J1F6R6 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441387 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 9.2e-175
Identity = 339/388 (87.37%), Postives = 350/388 (90.21%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPPHNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLRI 60
           MAI+NFTNLSTP PFLRRSPP NF YILT    +APSLR H        SP R  R L I
Sbjct: 1   MAIRNFTNLSTPSPFLRRSPPLNFTYILTCRTCAAPSLRFH--------SPRRR-RSLGI 60

Query: 61  SVAFASSDGIPPGGHGGGGGGGGEGHG-EGGEEEEEEDREKNREEAIVVLAEAGRSTESL 120
           SVAFASS GIPPGGH GGGGGGG G G EGG   EEEDREKNR EAI VLAEAGRSTESL
Sbjct: 61  SVAFASSGGIPPGGHDGGGGGGGGGGGHEGG---EEEDREKNRAEAIAVLAEAGRSTESL 120

Query: 121 PKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGVG 180
           PKDLAAAIAAGRVP VIVERFLE+EKSAVLRWL+QFGGFKERLLADDLFLAK+AMECGVG
Sbjct: 121 PKDLAAAIAAGRVPGVIVERFLEMEKSAVLRWLMQFGGFKERLLADDLFLAKMAMECGVG 180

Query: 181 IFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLTK 240
           IFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKPPLA+SAGLLTK
Sbjct: 181 IFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPPLAISAGLLTK 240

Query: 241 FFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKFF 300
            FYGCPENAFQVA AGTS+SFLQRVGAVVRNGAKLFAVGS ASVVGTGITN+LIN+RK F
Sbjct: 241 LFYGCPENAFQVAFAGTSYSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNSLINVRKLF 300

Query: 301 DKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAICF 360
           DKSYAMEAEDVPVLATSIGYG YMSVSSNLRYQ+LAGVIEQRMLEPLLHKHKLALSAICF
Sbjct: 301 DKSYAMEAEDVPVLATSIGYGTYMSVSSNLRYQILAGVIEQRMLEPLLHKHKLALSAICF 360

Query: 361 VVRTGNTFLGSLMWVDFARWTGIQRTRE 384
            VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 AVRTGNTFLGSLMWVDFARWTGIQRTRE 376

[Close]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL
Match: A0A6J1J072 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481520 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.2e-174
Identity = 339/389 (87.15%), Postives = 351/389 (90.23%), Query Frame = 0


Query: 1   MAIQNFTNLSTPPPFLRRSPPHNFAYILT----SAPSLRLHPSLSFAATSPLRPCRGLRI 60
           MAI+NFTNLSTP PFLRRSPP NF YILT    +APSLR H        SP R  R L I
Sbjct: 1   MAIRNFTNLSTPSPFLRRSPPLNFTYILTCRTCTAPSLRFH--------SPRRR-RSLGI 60

Query: 61  SVAFASSDGIPPGGH--GGGGGGGGEGHGEGGEEEEEEDREKNREEAIVVLAEAGRSTES 120
           SVAFASS GIPPGGH  GGGGGGGG+GH EGG   EEEDREKNR EAI VLAEAGRSTES
Sbjct: 61  SVAFASSGGIPPGGHDRGGGGGGGGDGH-EGG---EEEDREKNRAEAIAVLAEAGRSTES 120

Query: 121 LPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERLLADDLFLAKVAMECGV 180
           LPKDLAAAIAAGRVPAVIVERFLE+EKSAVLRWL+QFGGFKERLLADDLFLAK+AMECGV
Sbjct: 121 LPKDLAAAIAAGRVPAVIVERFLEMEKSAVLRWLMQFGGFKERLLADDLFLAKMAMECGV 180

Query: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLLT 240
           GIFTKTAAELEKRKENFSKELDFVCADVIMAI+ADFMLVWLPAPTVSLKPPL +SAGLLT
Sbjct: 181 GIFTKTAAELEKRKENFSKELDFVCADVIMAIVADFMLVWLPAPTVSLKPPLTISAGLLT 240

Query: 241 KFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLINIRKF 300
           K FYGCPENAFQVA AGTS+SFLQRVGAVVRNGAKLFAVGS ASVVGTGITN+LIN+RK 
Sbjct: 241 KVFYGCPENAFQVAFAGTSYSFLQRVGAVVRNGAKLFAVGSGASVVGTGITNSLINVRKL 300

Query: 301 FDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHKLALSAIC 360
           FDKSYAMEAEDVPVLATSIGYG YMSVSSNLRYQ+LAGVIEQRMLEP LHKHKLALSAIC
Sbjct: 301 FDKSYAMEAEDVPVLATSIGYGTYMSVSSNLRYQILAGVIEQRMLEPFLHKHKLALSAIC 360

Query: 361 FVVRTGNTFLGSLMWVDFARWTGIQRTRE 384
           F VRTGNTFLGSLMWVDFARWTGIQRTRE
Sbjct: 361 FAVRTGNTFLGSLMWVDFARWTGIQRTRE 376

[Close]

BLAST of CcUC10G197290 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 422.2 bits (1084), Expect = 4.6e-118
Identity = 219/343 (63.85%), Postives = 279/343 (81.34%), Query Frame = 0


Query: 39  SLSFAATSPLRPCRGLRISVAFASSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNR 98
           S+SF    P+ P     +S +  +      GG   GGGGGG+G    G+   +EDR++NR
Sbjct: 47  SISFNRRVPITPV----LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNR 106

Query: 99  EEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQFGGFKERL 158
            EA+++L E+G   ESLPKDLAAAI AGR+P  ++ RFLEL+KSAV+RWL+QFGGF+ERL
Sbjct: 107 NEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERL 166

Query: 159 LADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAP 218
           LADDLF+AK+AMECGVGIFTKTAAE E+R+ENF  EL+ V ADV MAIIADFMLV+LPAP
Sbjct: 167 LADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAP 226

Query: 219 TVSLKPPLAVSAGLLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSAS 278
           TVSL+PPLA++AG ++KFF+ CP+NAFQVAL+GTS++ LQR+GA+ RNGAKLFAVG+++S
Sbjct: 227 TVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSS 286

Query: 279 VVGTGITNTLINIRKFFDKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQVLAGVIEQRM 338
           +VGT ITN  I  RK  D++   E E VP+++TS+ YGVYM+VSSNLRYQ++AGVIEQR+
Sbjct: 287 LVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRL 346

Query: 339 LEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQRT 382
           LEP+LH+HKLALSA+CF VRTGNTFLGSL+WVD+AR  GIQ++
Sbjct: 347 LEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKS 385

[Close]

BLAST of CcUC10G197290 vs. TAIR 10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-48
Identity = 114/291 (39.18%), Postives = 168/291 (57.73%), Query Frame = 0


Query: 97  NREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQ-FGGFK 156
           +R E   V+  AGR  ++LP+D+   +  G V   I++ F +LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 157 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWL 216
           ERLLAD  FL ++A+E  + I T   A+ EKRKENF +ELD+V  D + A + DF  VWL
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 217 PAPTVSLKPPLAVSAG-----LLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKL 276
           PAPT+S       + G      L       P+NAFQ +L G  ++   R+ +V+  G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 277 FAVGSSASVVGTGITNTLINIRKFFDKSYAM--EAEDVPVLATSIGYGVYMSVSSNLRYQ 336
             VG  +S    G +N L  IRKF      +  +A+  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 337 VLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           ++AG+IE R+ +  L    L ++ I FVVR  N++ G+  W+D AR TG+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of CcUC10G197290 vs. TAIR 10
Match: AT2G40400.2 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-48
Identity = 114/291 (39.18%), Postives = 168/291 (57.73%), Query Frame = 0


Query: 97  NREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQ-FGGFK 156
           +R E   V+  AGR  ++LP+D+   +  G V   I++ F +LE+  ++  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 157 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWL 216
           ERLLAD  FL ++A+E  + I T   A+ EKRKENF +ELD+V  D + A + DF  VWL
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 217 PAPTVSLKPPLAVSAG-----LLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKL 276
           PAPT+S       + G      L       P+NAFQ +L G  ++   R+ +V+  G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 277 FAVGSSASVVGTGITNTLINIRKFFDKSYAM--EAEDVPVLATSIGYGVYMSVSSNLRYQ 336
             VG  +S    G +N L  IRKF      +  +A+  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 337 VLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           ++AG+IE R+ +  L    L ++ I FVVR  N++ G+  W+D AR TG+Q
Sbjct: 650 IIAGLIEHRISDE-LSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of CcUC10G197290 vs. TAIR 10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-45
Identity = 110/291 (37.80%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 97  NREEAIVVLAEAGRSTESLPKDLAAAIAAGRVPAVIVERFLELEKSAVLRWLLQ-FGGFK 156
           +R E   V+  AGR  ++LP D+   +  G V   +++   +LE+  ++  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 157 ERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWL 216
           ERLLAD  FL ++A+E  + I T   A+ EKRKENF +E+D+V  D +   + DF  VWL
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 217 PAPTVSLKPPLAVSAG-----LLTKFFYGCPENAFQVALAGTSFSFLQRVGAVVRNGAKL 276
           PAPT+S       + G      L       P+NAFQ +LAG  ++   R+ +V+  G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 277 FAVGSSASVVGTGITNTLINIRKFF--DKSYAMEAEDVPVLATSIGYGVYMSVSSNLRYQ 336
             VG  +S    G +N L   RK    +   A + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 337 VLAGVIEQRMLEPLLHKHKLALSAICFVVRTGNTFLGSLMWVDFARWTGIQ 380
           ++AG+IE R+ +  L    L ++AI FVVRT N++ G+  W+D AR TG+Q
Sbjct: 659 IIAGLIEHRLSDE-LSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of CcUC10G197290 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-31
Identity = 104/334 (31.14%), Postives = 170/334 (50.90%), Query Frame = 0


Query: 62  SSDGIPPGGHGGGGGGGGEGHGEGGEEEEEEDREKNREEAI---VVLAEAGRSTESLPKD 121
           ++DG   GG+G GGGGGG+G G+ GE+E ++  EK     +    V+ E  R   +LP+D
Sbjct: 109 NNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPED 168

Query: 122 LAAAIAAGRVPAVIVERFLELEKSAVLRWLLQF-----GGFKERLLADDLFLAKVAMECG 181
           +  A  +  +  + + R+L+L+ S    W L F        + R+LAD  FL KV  E  
Sbjct: 169 MLEAAKSVGIRKLFLLRYLDLQGSV---WPLGFLMRSCAMLRNRMLADPSFLFKVGTEVA 228

Query: 182 VGIFTKTAAELEKRKENFSKELDFVCADVIMAIIADFMLVWLPAPTVSLKPPLAVSAGLL 241
           +     T AE++KR E+F  E +   AD+++ ++ D  LV L AP   +  P   S GL 
Sbjct: 229 IDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLF 288

Query: 242 TKFFYGC---PENAFQVALAGTSFSFLQRVGAVVRNGAKLFAVGSSASVVGTGITNTLIN 301
                 C   P + F+    G  FS  QR+      G    +VG    ++G GI N ++ 
Sbjct: 289 KDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMT 348

Query: 302 IRKFFDKSYAMEAEDVPV---LATSIGYGVYMSVSSNLRYQVLAGVIEQRMLEPLLHKHK 361
            ++   KS     EDVP+     ++  +GV++ +SSN RYQ++ G+  +R++E      +
Sbjct: 349 AKRSVKKS----EEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAKR 408

Query: 362 LALSAICFV--VRTGNTFLGSLMWVDFARWTGIQ 380
           + + A+ F   VR  N   G + +VD+A+ +G+Q
Sbjct: 409 IPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

The following BLAST results are available for this feature:

BLAST of CcUC10G197290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461823.1	2.8e-178	88.69	PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo] >KAA0...	[more]
XP_004149738.1	1.8e-177	88.43	protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN58569.1 hypoth...	[more]
XP_023526496.1	2.2e-175	87.60	protein RETICULATA-RELATED 4, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6581562.1	2.2e-175	87.34	Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_022934115.1	1.9e-174	87.37	protein RETICULATA-RELATED 4, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of CcUC10G197290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CJ5	6.4e-117	63.85	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	1.4e-47	39.18	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	2.5e-44	37.80	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9FGP9	6.0e-30	31.14	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	3.3e-28	32.93	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]

BLAST of CcUC10G197290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXM9	1.4e-178	88.69	Protein RETICULATA-RELATED 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3CG26	1.4e-178	88.69	protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0LCC3	8.9e-178	88.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686720 PE=3 SV=1	[more]
A0A6J1F6R6	9.2e-175	87.37	protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1J072	1.2e-174	87.15	protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CcUC10G197290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12470.1	4.6e-118	63.85	Protein of unknown function (DUF3411)	[more]
AT2G40400.1	1.0e-48	39.18	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.2	1.0e-48	39.18	Protein of unknown function (DUF399 and DUF3411)	[more]
AT3G56140.1	1.8e-45	37.80	Protein of unknown function (DUF399 and DUF3411)	[more]
AT5G22790.1	4.2e-31	31.14	reticulata-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..98
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 50..383
None	No IPR available	PANTHER	PTHR31620:SF8	OS05G0388600 PROTEIN	coord: 50..383
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 156..333 e-value: 3.7E-62 score: 209.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G197290.1	CcUC10G197290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane