CcUC10G197100 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G197100
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L44
Location	CicolChr10: 23657644 .. 23658366 (-)
RNA-Seq Expression	CcUC10G197100
Synteny	CcUC10G197100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACACCGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCAGCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTCATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAGGCAGCGGCAGAGGTGGTTTGGGGGGAATATCTTGA

mRNA sequence

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACACCGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCAGCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTCATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAGGCAGCGGCAGAGGTGGTTTGGGGGGAATATCTTGA

Coding sequence (CDS)

ATGGCGGAATCTTCTGACAAAATCCCTCCCTCCAAATCCCGACCCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATCCCAAAAAGCCTTCCCCGATCGCCCCACGTAACCGCCGGACTTTCTCGCTTTCCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACACCGCCGTCCCATCCCACAATGAACTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCCCTGCCGCTGATTACACCCAGAACACCAGCGGTCGGAGGCGAGATCGTCGTGGATTCGGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGGAAGAAATCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGTGAAAAAAACCACCGCGTTGTTGCACTCTGTTTCTCTTCCCTCTCAACTATTAAACCGCCAGAATGATTTGAAAAAATCTGTCTCTCATCTCCCCGCCGCCGTCGCTACCATCGCGCCGGCGTTCTCAGACCGTCATAAACCGGCGCCAAATCTGCCGACGAATTCTCCGGCCAAGAATTTCGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCATACTCTGCACGGCGGCGCTGTTCTACTTGCGACGTCGCCTGAGATCGGAAATCGTACCGGAAGGCAGCGGCAGAGGTGGTTTGGGGGGAATATCTTGA

Protein sequence

MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVDTAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSGRGGLGGIS

Homology

[Close]

BLAST of CcUC10G197100 vs. NCBI nr
Match: KAA0052773.1 (60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal protein L44 [Cucumis melo var. makuwa])

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-86
Identity = 180/242 (74.38%), Postives = 196/242 (80.99%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG + +KPSQTRKK ESTQSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +K  A LHSVS PSQLL RQ D K+SVS HLPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGG 240
            TN P KN DRVI++VMVAI+VLWGRLCAILCT ALFYL RR+RSE+ V  G GRGG GG
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGG 240

[Close]

BLAST of CcUC10G197100 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_002056 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 3.8e-80
Identity = 173/243 (71.19%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS    +KPSQTRKK  STQSNF
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +KT ALLHSVSLPSQ L RQ   KK VS HLPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLG 240
           PT  P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+  GSGRG L 
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLS 240

[Close]

BLAST of CcUC10G197100 vs. NCBI nr
Match: XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-57
Identity = 141/237 (59.49%), Postives = 164/237 (69.20%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  TAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSES 120
            AVP       ++ SFSP+FKKPPP PLI  R P V  +IV     + IKPSQ  KK+ES
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV-----ELIKPSQPWKKTES 120

Query: 121 TQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKP 180
           T+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VSHL +AV T  P  S+R KP
Sbjct: 121 TRSDF----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHL-SAVKTPTPTSSERRKP 180

Query: 181 APNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG 233
           A   P NSPAK  D +IVIV VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Sbjct: 181 ADKPPMNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227

[Close]

BLAST of CcUC10G197100 vs. NCBI nr
Match: KAG6606901.1 (60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 5.9e-57
Identity = 140/237 (59.07%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAE+S+K+ PSK   HFLLRCF SSPK+  KK       + R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRWDSRIPSPRFRFKKSSATVPID 60

Query: 61  TAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSES 120
            AVP       ++ SFSP+FKKPPP PLI  R P V  +IV     + IKPSQT KK+ES
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV-----ELIKPSQTWKKTES 120

Query: 121 TQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKP 180
           T+     + L+P K+T ALLHS+SLPS+ LNRQ DLKK+VSHL +AV T  P  S+R KP
Sbjct: 121 TR----YDSLTPAKRTAALLHSISLPSRRLNRQKDLKKTVSHL-SAVKTPTPTSSERRKP 180

Query: 181 APNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG 233
           A   P NSPAK  D +IVIV VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Sbjct: 181 ADKAPMNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETESEGGG 227

[Close]

BLAST of CcUC10G197100 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima])

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-56
Identity = 141/239 (59.00%), Postives = 156/239 (65.27%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            AVP H+ELSFSP+F  PPP          + GEI+VDSGCK IK S+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPP-------PSPIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLP 180
           T EKL P KKT+  LHS          +  LKKS+SHLP AVA   P  S     +   P
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG 236
           TNSP   FD V VIV VAIVVLWGRLCAILCTAALFYLRR LRS    ++V +G G  G
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFG 217

[Close]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL
Match: A0A5A7UA28 (60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00090 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.7e-87
Identity = 180/242 (74.38%), Postives = 196/242 (80.99%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS K PPSKS   FL  CFRSS KL  KKPS IAPRNRRTFSL+FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSFSPDFKKPPPL LITP+ P V GEIVVDSG + +KPSQTRKK ESTQSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +K  A LHSVS PSQLL RQ D K+SVS HLPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEI-VPEGSGRGGLGG 240
            TN P KN DRVI++VMVAI+VLWGRLCAILCT ALFYL RR+RSE+ V  G GRGG GG
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGG 240

[Close]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL
Match: A0A0A0LCZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.8e-80
Identity = 173/243 (71.19%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MA+SS+ IPPSKS  HFL  CFRSS KL  KK S IAPR RRT S +FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            A PSH+ELSF P+FKK PPL  I P+ P VGGEIVVDS    +KPSQTRKK  STQSNF
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSS---LKPSQTRKKPHSTQSNF 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVS-HLPAAVATIAPAFSDRHKPAPNL 180
           T +KLSP +KT ALLHSVSLPSQ L RQ   KK VS HLPAAVAT +PAFSD +KP P L
Sbjct: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPE--GSGRGGLG 240
           PT  P KNFDRVI++V+VAIV+LWGRLCAILCT ALFYL RR+RSEI P+  GSGRG L 
Sbjct: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLS 240

[Close]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL
Match: A0A6J1GBH7 (uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC111452650 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 5.7e-58
Identity = 141/237 (59.49%), Postives = 164/237 (69.20%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAE+S+K+ PSK   HFLLRCF SSPK+  KK      R+ R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  TAVPS-----HNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSES 120
            AVP       ++ SFSP+FKKPPP PLI  R P V  +IV     + IKPSQ  KK+ES
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV-----ELIKPSQPWKKTES 120

Query: 121 TQSNFTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKP 180
           T+S+F    L+P K+T ALLHS+SLPS+ LNRQ D KK+VSHL +AV T  P  S+R KP
Sbjct: 121 TRSDF----LTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHL-SAVKTPTPTSSERRKP 180

Query: 181 APNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRSEIVPEGSG 233
           A   P NSPAK  D +IVIV VAIVVLWG+LCAILCT ALFY  RRLRSE   EG G
Sbjct: 181 ADKPPMNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGG 227

[Close]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL
Match: A0A6J1IZW6 (uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 141/239 (59.00%), Postives = 156/239 (65.27%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K   IA  NRRT SL FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSNF 120
            AVP H+ELSFSP+F  PPP          + GEI+VDSGCK IK S+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPP-------PSPIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAFSDRHKPAPNLP 180
           T EKL P KKT+  LHS          +  LKKS+SHLP AVA   P  S     +   P
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS----EIVPEGSGRGG 236
           TNSP   FD V VIV VAIVVLWGRLCAILCTAALFYLRR LRS    ++V +G G  G
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFG 217

[Close]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL
Match: A0A6J1F3C2 (uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC111441760 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 146/245 (59.59%), Postives = 161/245 (65.71%), Query Frame = 0


Query: 1   MAESSDKIPPSKSRPHFLLRCFRSSPKLHPKKPSPIAPRNRRTFSLSFRFKKSSATVPVD 60
           MAESSD     K R HFL RCFRSSP +  +K  PIA  NRRT SL FRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  TAVPSHNELSFSPDFKKPPPLPLITPRTPAVGGEIVVDSGCKPIKPSQTRKKSESTQSN- 120
            AVP H+ELS SP+F  PPP PLI        GEI+VDSGCK IKPS+TRKKSESTQSN 
Sbjct: 61  AAVPCHDELSLSPEFNTPPPPPLIK-------GEIIVDSGCKTIKPSKTRKKSESTQSNP 120

Query: 121 ---FTAEKLSPVKKTTALLHSVSLPSQLLNRQNDLKKSVSHLPAAVATIAPAF--SDRHK 180
               T    +  KKT+  LHS          +  LKKS+SHLP A A +  +   SDR K
Sbjct: 121 KSESTQSNSTAEKKTSPSLHS----------EKGLKKSISHLPTAAAALTTSLPSSDRWK 180

Query: 181 PAPNLPTNSPAKNFDRVIVIVMVAIVVLWGRLCAILCTAALFYLRRRLRS----EIVPEG 236
           P    PTNSP K FD VIVIV VAIVVLWGRLCAILCTAALFYLRR LRS    ++V  G
Sbjct: 181 P----PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIHG 219

The following BLAST results are available for this feature:

BLAST of CcUC10G197100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052773.1	1.6e-86	74.38	60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal p...	[more]
KGN58547.1	3.8e-80	71.19	hypothetical protein Csa_002056 [Cucumis sativus]	[more]
XP_022949237.1	1.2e-57	59.49	uncharacterized protein LOC111452650 [Cucurbita moschata]	[more]
KAG6606901.1	5.9e-57	59.07	60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982640.1	2.2e-56	59.00	uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharac...	[more]

BLAST of CcUC10G197100 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G197100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UA28	7.7e-87	74.38	60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0LCZ2	1.8e-80	71.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1	[more]
A0A6J1GBH7	5.7e-58	59.49	uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]
A0A6J1IZW6	1.1e-56	59.00	uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455...	[more]
A0A6J1F3C2	1.1e-56	59.59	uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of CcUC10G197100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	PANTHER	PTHR34379:SF3	PROTEIN, PUTATIVE-RELATED	coord: 1..230
IPR040411	Uncharacterized protein At5g23160-like	PANTHER	PTHR34379	OS07G0553800 PROTEIN	coord: 1..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G197100.1	CcUC10G197100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome