CcUC10G196630 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G196630
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related
Location	CicolChr10: 22907628 .. 22907963 (-)
RNA-Seq Expression	CcUC10G196630
Synteny	CcUC10G196630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCACGTATCAGATATTAAATTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAAACATGTCATTGAAGCCCCCTTTTATACTCAGCGTCTTTCTTCCAACTTTCACAGCCCACCGATGTGGGACAAACTCATTTCCACTTCCACTGCATTTCCACGAATTTCAATTTCATGTATGGTTTCGTTAATCTTTTACAACTTTATCTTTCTCAAAAATGATTGAATATTATTAAATTATTCATTCATTTCTCATTTACGAACATTTCCTTCCTGTTTTTTAGTTCCAAAAATTGCAATGTATGTGTGGTAA

mRNA sequence

ATGGCCCACGTATCAGATATTAAATTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAAACATGTCATTGAAGCCCCCTTTTATACTCAGCGTCTTTCTTCCAACTTTCACAGCCCACCGATGTGGGACAAACTCATTTCCACTTCCACTGCATTTCCACGAATTTCAATTTCATTTCCAAAAATTGCAATGTATGTGTGGTAA

Coding sequence (CDS)

ATGGCCCACGTATCAGATATTAAATTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTAAACATGTCATTGAAGCCCCCTTTTATACTCAGCGTCTTTCTTCCAACTTTCACAGCCCACCGATGTGGGACAAACTCATTTCCACTTCCACTGCATTTCCACGAATTTCAATTTCATTTCCAAAAATTGCAATGTATGTGTGGTAA

Protein sequence

MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLISTSTAFPRISISFPKIAMYVW

Homology

[Close]

BLAST of CcUC10G196630 vs. NCBI nr
Match: KJB31347.1 (hypothetical protein B456_005G187200, partial [Gossypium raimondii])

HSP 1 Score: 71.2 bits (173), Expect = 4.2e-09
Identity = 41/69 (59.42%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLISTSTAF 60
          MAHVSDIKLIRTDTTLDLSQKAEKGML  V    FY Q L+S+ +   MWDK     T F
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLAAVQTRLFYKQLLASSRYISMMWDK----DTVF 79

Query: 61 PRISISFPK 70
            + I + K
Sbjct: 80 SNLIIIWDK 84

[Close]

BLAST of CcUC10G196630 vs. NCBI nr
Match: KAG8651632.1 (hypothetical protein MANES_06G007001v8 [Manihot esculenta])

HSP 1 Score: 71.2 bits (173), Expect = 4.2e-09
Identity = 35/52 (67.31%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDK 53
          MAHVSDIKLIRTDTTLDLSQKAEKGML  +  A FY+      F    MWDK
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLDSMASASFYSHSFQGPFRFKAMWDK 52

[Close]

BLAST of CcUC10G196630 vs. NCBI nr
Match: RYR31585.1 (hypothetical protein Ahy_B01g056412 [Arachis hypogaea])

HSP 1 Score: 70.9 bits (172), Expect = 5.4e-09
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLIST 57
          M H+SDIKLIRTDTTLDLSQKAEKGML H+  + FYT     +  +P MWD L S+
Sbjct: 1  MTHISDIKLIRTDTTLDLSQKAEKGMLCHIFISFFYTNAFPLSSSAPLMWDFLSSS 56

[Close]

BLAST of CcUC10G196630 vs. NCBI nr
Match: CBI33939.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 70.1 bits (170), Expect = 9.3e-09
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWD 52
          M+HVSDIKLIRTDTTLDLSQKAEKGML+ V  + FY   L+++ H   MWD
Sbjct: 43 MSHVSDIKLIRTDTTLDLSQKAEKGMLRSVSSSSFYIMWLATSSHIVAMWD 93

[Close]

BLAST of CcUC10G196630 vs. NCBI nr
Match: TYI94351.1 (hypothetical protein E1A91_D02G197200v1, partial [Gossypium mustelinum])

HSP 1 Score: 70.1 bits (170), Expect = 9.3e-09
Identity = 40/69 (57.97%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLISTSTAF 60
          M HVSDIKLIRTDTTLDLSQKAEKGML  V    FY Q L+S+ +   MWDK     T F
Sbjct: 20 MTHVSDIKLIRTDTTLDLSQKAEKGMLSAVQTRLFYKQLLASSRYISMMWDK----DTVF 79

Query: 61 PRISISFPK 70
            + I + K
Sbjct: 80 SNLIIIWDK 84

[Close]

BLAST of CcUC10G196630 vs. ExPASy Swiss-Prot
Match: F4J3H7 (Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-07
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL
Match: A0A0D2NF40 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G187200 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09
Identity = 41/69 (59.42%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLISTSTAF 60
          MAHVSDIKLIRTDTTLDLSQKAEKGML  V    FY Q L+S+ +   MWDK     T F
Sbjct: 20 MAHVSDIKLIRTDTTLDLSQKAEKGMLAAVQTRLFYKQLLASSRYISMMWDK----DTVF 79

Query: 61 PRISISFPK 70
            + I + K
Sbjct: 80 SNLIIIWDK 84

[Close]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL
Match: A0A445AYS1 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056412 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLIST 57
          M H+SDIKLIRTDTTLDLSQKAEKGML H+  + FYT     +  +P MWD L S+
Sbjct: 1  MTHISDIKLIRTDTTLDLSQKAEKGMLCHIFISFFYTNAFPLSSSAPLMWDFLSSS 56

[Close]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL
Match: D7TTF9 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00670 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWD 52
          M+HVSDIKLIRTDTTLDLSQKAEKGML+ V  + FY   L+++ H   MWD
Sbjct: 43 MSHVSDIKLIRTDTTLDLSQKAEKGMLRSVSSSSFYIMWLATSSHIVAMWD 93

[Close]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL
Match: A0A5D2VY36 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G197200v1 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09
Identity = 40/69 (57.97%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMWDKLISTSTAF 60
          M HVSDIKLIRTDTTLDLSQKAEKGML  V    FY Q L+S+ +   MWDK     T F
Sbjct: 20 MTHVSDIKLIRTDTTLDLSQKAEKGMLSAVQTRLFYKQLLASSRYISMMWDK----DTVF 79

Query: 61 PRISISFPK 70
            + I + K
Sbjct: 80 SNLIIIWDK 84

[Close]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL
Match: A0A0R0H4V9 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G280800 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.7e-09
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGMLKHVIEAPFYTQRLSSNFHSPPMW 51
          MAH+SDIKLIRTDTTLDLSQKAEKGMLK+  +  FY+Q   ++  S P+W
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMLKNFKDCLFYSQVFGADSFSSPIW 50

[Close]

BLAST of CcUC10G196630 vs. TAIR 10
Match: AT3G57770.1 (Protein kinase superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 6.4e-08
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGML 28
          MAH+SDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGMI 27

[Close]

BLAST of CcUC10G196630 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related )

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

The following BLAST results are available for this feature:

BLAST of CcUC10G196630 vs. NCBI nr


Match Name	E-value	Identity	Description
KJB31347.1	4.2e-09	59.42	hypothetical protein B456_005G187200, partial [Gossypium raimondii]	[more]
KAG8651632.1	4.2e-09	67.31	hypothetical protein MANES_06G007001v8 [Manihot esculenta]	[more]
RYR31585.1	5.4e-09	62.50	hypothetical protein Ahy_B01g056412 [Arachis hypogaea]	[more]
CBI33939.3	9.3e-09	66.67	unnamed protein product, partial [Vitis vinifera]	[more]
TYI94351.1	9.3e-09	57.97	hypothetical protein E1A91_D02G197200v1, partial [Gossypium mustelinum]	[more]

BLAST of CcUC10G196630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3H7	9.0e-07	92.59	Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=...	[more]

BLAST of CcUC10G196630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D2NF40	2.0e-09	59.42	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_005G1...	[more]
A0A445AYS1	2.6e-09	62.50	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g056412 PE=4 SV=1	[more]
D7TTF9	4.5e-09	66.67	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00670 PE=4 SV=...	[more]
A0A5D2VY36	4.5e-09	57.97	Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02...	[more]
A0A0R0H4V9	7.7e-09	66.00	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_13G280800 PE=4 SV=1	[more]

BLAST of CcUC10G196630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57770.1	6.4e-08	92.59	Protein kinase superfamily protein	[more]
AT1G16820.1	1.1e-07	96.15	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar pr...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34892	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..58
None	No IPR available	PANTHER	PTHR34892:SF1	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-RELATED	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G196630.1	CcUC10G196630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane