CcUC10G196360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G196360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein of unknown function (DUF3511)
Location	CicolChr10: 22401953 .. 22402252 (+)
RNA-Seq Expression	CcUC10G196360
Synteny	CcUC10G196360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACAGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATAAGACTGCGAACCGGGGCGGGTCGGCGGCGGCGGGGAAACCGTGGGGGTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCTCGGATCGTCCATGGATTTTGA

mRNA sequence

ATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACAGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATAAGACTGCGAACCGGGGCGGGTCGGCGGCGGCGGGGAAACCGTGGGGGTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCTCGGATCGTCCATGGATTTTGA

Coding sequence (CDS)

ATGTCCGCTTTCGATTCGGCCCACGGCGGCGGCCGCAGGGTCGACATCGTCAGCGGCAAACGCAACAGTGGACGCATCGCTGCTCAGATCTACAGGTCGCCGAATCTGGATAAGACTGCGAACCGGGGCGGGTCGGCGGCGGCGGGGAAACCGTGGGGGTTCGGCGACCCGGAAGCGAAGCGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTTGAAGGGAGAGTGAAGGATTCGCTGCGGAAGGGACTACGGTGGATTAAGGATAGGTGCTCTCGGATCGTCCATGGATTTTGA

Protein sequence

MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSAAAGKPWGFGDPEAKRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF

Homology

[Close]

BLAST of CcUC10G196360 vs. NCBI nr
Match: KAA0044404.1 (hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK29531.1 hypothetical protein E5676_scaffold655G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36
Identity = 82/99 (82.83%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSAAAGKPWGFGDPEAK 60
           MSAFDSA    RR++IVSGK N  R A QIYRSPNLD   NR GSAAAGKPWGF DPEAK
Sbjct: 1   MSAFDSA----RRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVGSAAAGKPWGFADPEAK 60

Query: 61  RRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           RRKRIAKYKVYTVEGRVKDSLRKGLRWIK+RCSRIVHGF
Sbjct: 61  RRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of CcUC10G196360 vs. NCBI nr
Match: KGN52839.1 (hypothetical protein Csa_014389 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 73/88 (82.95%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 12  RRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSAAAGKPWGFGDPEAKRRKRIAKYKVY 71
           RR++IVSGK N  R A QIYRSPNLD   NR GSAA GKPWGF DPEAKRRKRIAKYKVY
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSAATGKPWGFADPEAKRRKRIAKYKVY 63

Query: 72  TVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           TVEGRVKDSLRKGLRWIK++CSRIVHGF
Sbjct: 64  TVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of CcUC10G196360 vs. NCBI nr
Match: XP_022998630.1 (uncharacterized protein LOC111493216 [Cucurbita maxima])

HSP 1 Score: 151.4 bits (381), Expect = 4.2e-33
Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSA-AAGKPWGFGDPEA 60
           M+ F SAHGGGRRV+IVSGKR  G  + QIY SPNL  TANR GSA AA KPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of CcUC10G196360 vs. NCBI nr
Match: XP_022949041.1 (uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothetical protein SDJN03_00288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.7 bits (369), Expect = 1.0e-31
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANR-GGSAAAGKPWGFGDPEA 60
           M+ F SAHGGGR V+IVSGKR  G  + QIY SPNL  T NR G +AAA KPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of CcUC10G196360 vs. NCBI nr
Match: XP_023524599.1 (uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.2 bits (365), Expect = 3.0e-31
Identity = 73/100 (73.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANR-GGSAAAGKPWGFGDPEA 60
           M+ F SAHGGGR V+IVSGKR  G  + QIY SPNL  + NR G +AAA KPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRCVEIVSGKRYGGDGSCQIYGSPNLATSTNRVGSAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of CcUC10G196360 vs. ExPASy TrEMBL
Match: A0A5A7TMP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001340 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 82/99 (82.83%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSAAAGKPWGFGDPEAK 60
           MSAFDSA    RR++IVSGK N  R A QIYRSPNLD   NR GSAAAGKPWGF DPEAK
Sbjct: 1   MSAFDSA----RRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVGSAAAGKPWGFADPEAK 60

Query: 61  RRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           RRKRIAKYKVYTVEGRVKDSLRKGLRWIK+RCSRIVHGF
Sbjct: 61  RRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of CcUC10G196360 vs. ExPASy TrEMBL
Match: A0A0A0KV97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.9e-34
Identity = 73/88 (82.95%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 12  RRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSAAAGKPWGFGDPEAKRRKRIAKYKVY 71
           RR++IVSGK N  R A QIYRSPNLD   NR GSAA GKPWGF DPEAKRRKRIAKYKVY
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSAATGKPWGFADPEAKRRKRIAKYKVY 63

Query: 72  TVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           TVEGRVKDSLRKGLRWIK++CSRIVHGF
Sbjct: 64  TVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of CcUC10G196360 vs. ExPASy TrEMBL
Match: A0A6J1KD11 (uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.0e-33
Identity = 77/100 (77.00%), Postives = 84/100 (84.00%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANRGGSA-AAGKPWGFGDPEA 60
           M+ F SAHGGGRRV+IVSGKR  G  + QIY SPNL  TANR GSA AA KPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of CcUC10G196360 vs. ExPASy TrEMBL
Match: A0A6J1GAV9 (uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC111452504 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-32
Identity = 74/100 (74.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MSAFDSAHGGGRRVDIVSGKRNSGRIAAQIYRSPNLDKTANR-GGSAAAGKPWGFGDPEA 60
           M+ F SAHGGGR V+IVSGKR  G  + QIY SPNL  T NR G +AAA KPW FGDPE 
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of CcUC10G196360 vs. ExPASy TrEMBL
Match: A0A6J1A329 (uncharacterized protein LOC110414502 OS=Herrania umbratica OX=108875 GN=LOC110414502 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.7e-22
Identity = 60/97 (61.86%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 8   HGGGRRVDIVSGKRNS---GRIAAQIYRSPNLDKTANR--GGSAAAGKPWGFGDPEAKRR 67
           +G  RRV+IVSGK ++    +I +   RSP+L    NR  G S  A KPWGF DPE KR+
Sbjct: 11  YGVDRRVEIVSGKSSNVGPNQIFSSRSRSPDLQPVPNRTAGPSQGASKPWGFTDPEVKRK 70

Query: 68  KRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           KRIAKYKVYTVEG+VK SLRKGLRWIK++CS+IVHG+
Sbjct: 71  KRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGY 107

[Close]

BLAST of CcUC10G196360 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 8   HGGGRRVDIVSGKRNSGRIAAQIYRS----PNLDK-----TANRGGSAAAGKPWGFGDPE 67
           +G  RR +IVSGKRN      QIY +    P+L        A R  ++++ +  G  D E
Sbjct: 16  YGVDRRKEIVSGKRN------QIYGTRDYPPSLPPPPGKVAAGRSNASSSLRIGGLSDAE 75

Query: 68  AKRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
            KR+KRIA+YK YTVEG+VK +L+ G RWIK++C +IVH F
Sbjct: 76  MKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of CcUC10G196360 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.4 bits (163), Expect = 7.4e-12
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 14  VDIVSGKRNSGRIAAQIYR----SPNLDKT-----ANRGGSAAAGKPWGFGDPEAKRRKR 73
           +DIV+GK        Q+Y     SP    +      +   +     PW   D E KR+KR
Sbjct: 17  MDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKR 76

Query: 74  IAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHG 99
           IA YK Y +EG+VK +++KG  WIKDR S I+HG
Sbjct: 77  IATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of CcUC10G196360 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.0 bits (162), Expect = 9.6e-12
Identity = 24/54 (44.44%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 44  GSAAAGKPWGFGDPEAKRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVH 98
           G +++   WGF DP+ +R+KR+  Y+ YTVEG++K S RK  +WIKD+C+++++
Sbjct: 63  GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

[Close]

BLAST of CcUC10G196360 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 45  SAAAGKPWGFGDPEAKRRKRIAKYKVYTVEGRVKDSLRKGLRWIKDRCSRIVHGF 100
           S A  K WG  DPE +R+KR+A YK+Y VEG+VK S R   RW+K R +++V+G+
Sbjct: 50  SIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

[Close]

BLAST of CcUC10G196360 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 20  KRNSGRIAAQIYRS---PNLDKTANRGGSAAAGKPWGFGDPEAKRRKRIAKYKVYTVEGR 79
           +RN   I   I+R     ++     R  S +      + DPE KR++R+AKYK+Y+ EG+
Sbjct: 42  RRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGK 101

Query: 80  VKDSLRKGLRWIKDRCSRIVHG 99
           +K +LRK  +WIK +CS+I+HG
Sbjct: 102 MKITLRKSYKWIKIQCSKIIHG 123

The following BLAST results are available for this feature:

BLAST of CcUC10G196360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044404.1	2.4e-36	82.83	hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK2953...	[more]
KGN52839.1	1.4e-33	82.95	hypothetical protein Csa_014389 [Cucumis sativus]	[more]
XP_022998630.1	4.2e-33	77.00	uncharacterized protein LOC111493216 [Cucurbita maxima]	[more]
XP_022949041.1	1.0e-31	74.00	uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothet...	[more]
XP_023524599.1	3.0e-31	73.00	uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC10G196360 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G196360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMP6	1.1e-36	82.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KV97	6.9e-34	82.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1	[more]
A0A6J1KD11	2.0e-33	77.00	uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216...	[more]
A0A6J1GAV9	5.0e-32	74.00	uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1A329	4.7e-22	61.86	uncharacterized protein LOC110414502 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]

BLAST of CcUC10G196360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47480.1	3.2e-15	45.54	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	7.4e-12	39.36	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	9.6e-12	44.44	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	1.3e-11	50.91	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	8.2e-11	39.02	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 54..98 e-value: 4.4E-26 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..56
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 7..99
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 7..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G196360.1	CcUC10G196360.1	mRNA