CcUC10G196350 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G196350
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zf-RVT domain-containing protein
Location	CicolChr10: 22367570 .. 22373600 (+)
RNA-Seq Expression	CcUC10G196350
Synteny	CcUC10G196350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGCGGTTTCCGGCTTCGATCCGGCAGCGGCGGAGCGGTTGACCATCTGCCGCTGCCTCACCACCATAGATTTATAGATCTCGAGGATCATCTTCTCGTCGTATTCCTTCGCCGGCCGCTGTCCGAAACCGGCAATGCCATCGCACACGGCAGCGCCGCCGCCGTAGCTGGTGGTGAAAACTCGGGAATTAGCGAACCCGAGCATCATATTGACGTAGGCGTCACGGAGGCGGAGGAGGAGTTTTTTCGGGGACGGAAGTTTTCGTAAGAATCGAAACTTCGGTGAGATCTTGATCCGCCAGAAGCGCCGCCGGGTGTTCCGGGTCGACCCGAGCTCCACCTGGGCCAGCCTCCGCCGTCGCCGCGACGACCCGTTAAGCTTCTCGTAGTTTTTTCTCTTCCAGTAGCCTCTTAGCCCTTGGTACCATTTCTCTGAAACTCCATCTTCATCCATTTTTTTCTCTCTCCTTCTTTCGCTCTCTAGAATTGTGAATTTGGGGAAGATGAACCAGTCGGTAAGGTTTAGGAAGATGAATATATATGGAGTAATGTTGTGTTATAATATGAAATAAAAAATTTTGTATTTTATTTTATTATTTAAATTGAATAATATTATTTTTTTCAACTAAAAAATAATTCAATTATAAATTGAGTATCTTTTAACCTAGGCTGCTGATTAAGATACTAGTAATTTTCCTTGGGTAGAACATTTTAAATTAGGTATTTATTTTTGAGGATTTACTTTGAATTCAAGTAAGTATGCAAGAGTTTATCGTGGAGAAGAGAGCTTCTCCTAAAAGATCTCAGGTATAGAATTAGAGATGGTTCCTCGATAAAGACTACAAGTGATTCTTGGCTTCCTAGGCCTAATCCGTTTAAACTTATTCTGGTTAATCCACGTTTCAAGGACTCTCTAGTGGTTGAATTTTTACTCCCTAGTGGTCGATGGAATGGGCCACTTCTTTAGGAAGTGTTCACCATGGAGGATTGTGAGATGATTAAATGTATCCCAACTTGTTCAAAGCCGAAGGATATTCTACTTTGGCATTTTGACAAAAAAGGTCTCTACACTATAAAGAGTGAATACAAACACTACAACAAAAATAGGCTTCTATGACTCTAAAAAACAGTCATTACCACATTTGTTTACTCTTTTTTTTAGTCATTTAATCGCCCATCATCTAAAGTATATAGATGACACATGAGAAATCAGTCATCGTTGACAGTTTCATGACTTTTAGTCACAGTCAACAATAAATATATATTGACATTTATTCTAAGTCACGGAAACGATTTATATGACAAATTTTATACAGTCATAAAAAAATGAAAATGTTGACTTTTTTCTGTCAAATAAAGAGTTACGTTGACTGTTCACTTCTGTCATCGCAAAACAAATAATGACACGTTTAAAGTGTCAATAATACATTAACTATGACATTTTTTTAAGGTCATTTAATTACATACATCCCATGACTTTTGTCAGATATCATAGAAACCATTACCACGATACACGTTATTACACCTGTGTTTCCTTCAGTTTTAACACAAAATATGTATGCAAACATAAAAAATAACTTTCATATATAATAATGTAGTTCAAATTGTTAATACAATGAAAGTAGCTAGTAATCAAATTCTAGGTACAACATTTATAAATTCAGTACTTACAACTAATTGTTAGCATACTACCAAAAAATATATATACAACACCTATTTAAATATCTTGGTTGGTGGGCTTCCTTGCTTTAATGGCATCGTCCAGGAACCTTATAAAAAAAAACATTCATTTTAGAATTTGACTCAATACAAGTAAGCTTCGATGAACACTTTCAAAAAAATTATGCATATGATCATAATATAGCCACATAAATATATATTATATCACAATATAATCTCACTTTTTAACCTTAATAACATGAATAACCTCCAAATTTAACTTATACACTAGTCTACTAGAAAGAATAAGAGTTAATTGAAAAACTTCTTCGTTTAGGGGCAGGGGGGACAAGTGAAACATAGTATAGTAGGAGCAAAACAAATATATAATTATTGTAACTTGTCCAACCTTTTAGGAGTATAACTACTAAAAAGTAGAAATACTCATACATTAGTCTATTAGAAAGAATAAGGGTCAAATGAAAAACTTCTTCATTTAGGGAAGGACAAGTGAAACATAATACAAGAAATATTTATCACAAAAAAAAAAAAGATATCTCCTTAGAACTCAAGCACAGTAATCCAATACGAGCAAAACAGATATATAACTTAAATACTCTCAAACCAACATAAAAAGTACCTAAAAGTTTTTCAATAAACAATTTAACTCCCCAAACAACCAAAATAGTTTATATGTGCACTTTGATTATCAAACCAATTAAAAAGTACGTAAATGACACTTTGACTCCAAACACAAGTCCAAAATGCACAACTACGACTTCTAAACTCAAAACGAATGGCTAAAAAGTGTCTAAATGACACTTTGCTTACAAAAACAACTCCAAAATGCACAACTATAACCTCTAAACTCAAAACCAACCAAAGAATGGCTAAAAAGTGTCTAAATGACACTTTGACTACAAAAACAACTCCAAAATACACAACTATGACCTCTAAACTCAATACCAACCAAAGAATGGCTAAAAAGTGTCTAAATGACACTCTGCTTACAAAAACAACTCCAAAATGCACAACTATGACCTCTAAACTCAAAACCAACCAAAGAATGGCTAAAAAGTGTCTAAATGACACTTTGACTACAAAAACAACTCCAAAATGCACAACTATGACCTCTAAACTCAATACCAACCAAAGAATGGCTAAAAAGTGTCTAAATGACACTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACAACTTTACTTTCGCTGGACAATAGGTCAAAATTCTTCAAAAACTCCAATCTAACCTTCAAATATCATTGGTAATCCAAATGTTAGGACAAAACTAAAACCAAACTTAATTGGCATTCCATAAATTTAGTCAAATCCACCATTTATGCCACATTAAAACATAATAATATATCCAACACTAAAACACATAGTACAAAAAAACTTTAGTAGTGCCACTTACATGAAGAATAAGACGGCTAACAATTTTGACACATTACATACAAACATAAATATGAACCTTCATATATAATAATAAATTTTGGCAACGCTAATACAAGTAAACTATAAACAAGGAAATTATAAAAACATAACACTCACAATACATAGTACAAAACAATCATCATACTCAAAAGAGATGTTCTTACCTTGACCAATGCCTTAAAACTTAGTTTAAACACTATGAAATAATCTATAACTACAAACAAAGAGTTTAAGACTTAATTAGAAATCTAAATCTACAATAAAAAACTTAATTAAAAGTAAAAAAAATATAAATAAAACTCATAAAGATATCCATGTGGCATATTATAATTAATTAAGTAAAACATGCAACATACTAACATAAAACAAATAAATGCCCAAGGTAGAATTATACTTGATGTGCTACTAAAACAAATTCAAACGCTTCTAAACAATAATAACAAAGTATACAAATAAGCTTAAAATAAAACTTTAAAACACACAATATACTTAAGAGTCACGAAACAACAACATAAACATAAATAGGCTCAAGAATTGTACTAGAAAATTAGTTGGTTAACCAAATTTTACAATGACAAATAGAAAGAATAGTTCACTTACAGCGCATTGGATATTGACTTCCATTTACTACCACTAGCCTTTGCAACTTGTTTATTTGGCCAAACGAGCACACTTTCAAAAACCTAGGAATCTTCTTCAAAACAACAAAAAGAAAAATAGTGCACAGATCTAAAATTACTTGTAGTGGCAACAAAAGAAAACCAAATGTAACAGACAAAAACTTAGGGCATGATGTTCAAAAAATTTTCAATCAATATGCAAAAATAATCATATCTAAAAGTAATCACCAAGCCAAACAACCAATCTCAACAACATTTCACCAACAAAGACCAAAGTGAAGTCACATCCCAAAAAAATCCAATAGCTGAAACTAAAAGATAACATACTTGCGAATGAACCCACCAACAAGATTCATGAACAAAATCGCCCAAATCGGGTGGGTATGGTTGCATGTGGGTGGCCAATGTCTTGCTTATGCAACAAGTCGTGAATATAGTGTTGTTGGTGAAGAAAAAACTCATGGGGGAGGGATGTCGTCGTGCTACAGCTCATCGTCAACGTGGATCTGGTCCGTTTGCGCCATCGTTGTTCATGGTTGCTACTTCTCGGCGTCGTTGTTCATGGTCGTTGTTCATGGTCGTTGTTCATGGTCGTTGCTCTTAACTGATGGTCACCGAAAAAGAAACATAGAGGCCAAACCTTCTTGTCGGGGCGGCAGCAGCGGCGGCGTCGTCGTTCTTCGGGAGCCTTGTTGTCGGGAGCCTTGTTGTGGGAAGAGGATTTTGTGGGGTGAGGGTGGGGAAGATGAAAGGAATGAGTGGAGATTTTTTATTTGTTTTATGTAAAAATAAAAGTAAAATGAAAAAGAAAAAAAGAGGGAAAGTGAGAGGAGGGAAAGTAAAAAAAGTCAAAATAGTAAAAAAAAAATCTGAAAATTCACGTCTTTTCCCGCCAAAACCGTATTTTTCATTTTCTTACATTTAATGACTGTTTTTTTTAGTCATTAATTAATGACACAAAAAAACAGTCATCAATTCCGACAAATCCGAAAAACTCCGTTTTTTCCCGCCAAAAACGCGTGATTTTGGATTTAATGACTCTTTTTTCACTTTCTCCTTTATTTTTGGCACTGTACAAGAGTCATTGAATGTCAAATTTGTTGTAGTGAAATTGTTTCTAAATACTGAGATTCTGTTGGATTCATCTAGTGAAAATCTGATTGGAGGAATTTGGTGTGGAATTTGGAAGCTCGACATCCCTAATATAATCAAACACTTTCATTTGGACAGCCTGAATGGGTATCTTCACACAATAGAGAAATTAAGAAAGCGTGGGATTAAAGTGATACCTATTTGTCCGTGTTGTGAAAAGGAGGTGGAATCGATTGATCACGTGTTATTTCGCTGTTAGATGACAACTTCGATCTGAATGTTGGTTTGGAATAAGGAGTTGAGTCAAGCGAGTTTCAACTTGTGTTTTGTTGATTGGTGGATCTCTCTAAGTTCCTCCTGCTCAAAAGAAGAGATTGAATTGATTAGTTTGGGGTGTTGGGCTATTTGGCTGGACAGAAATAAAATCATACATGACTCACCTGTTCCAAATCTAGAGGTCTGCAGTTAGTGGATCCTAAATTACGCCAAGGATTTTGCATAGAAATCTTTTGGGTCGAGGGGTCTGCTTCCCCCTCAGCCTTTGCCTCATGTATCAGAAGAGCCAATCAGATGGTGACCCCCACCTGCGAATTTCCTCAAACTAAACGT

mRNA sequence

GTGAGCGGTTTCCGGCTTCGATCCGGCAGCGGCGGAGCGGTTGACCATCTGCCGCTGCCTCACCACCATAGATTTATAGATCTCGAGGATCATCTTCTCGTCGTATTCCTTCGCCGGCCGCTGTCCGAAACCGGCAATGCCATCGCACACGGCAGCGCCGCCGCCGTAGCTGGTGGTGAAAACTCGGGAATTAGCGAACCCGAGCATCATATTGACGCGTCACGGAGGCGGAGGAGGAGTTTTTTCGGGGACGGAAGTTTTCGTAAGAATCGAAACTTCGGTGAGATCTTGATCCGCCAGAAGCGCCGCCGGGTGTTCCGGGTCGACCCGAGCTCCACCTGGGCCAGCCTCCGCCGTCGCCGCGACGACCCGTTAAGCTTCTCCCTGAATGGGTATCTTCACACAATAGAGAAATTAAGAAAGCGTGGGATTAAAGTGATACCTATTTGTCCGTGTTGTGAAAAGGAGGTGGAATCGATTGATCACGAGTTGAGTCAAGCGAGTTTCAACTTGTGTTTTGTTGATTGGTGGATCTCTCTAAGTTCCTCCTGCTCAAAAGAAGAGATTGAATTGATTAGTTTGGGGTGTTGGGCTATTTGGCTGGACAGAAATAAAATCATACATGACTCACCTGTTCCAAATCTAGAGTTAGTGGATCCTAAATTACGCCAAGGATTTTGCATAGAAATCTTTTGGGTCGAGGGGTCTGCTTCCCCCTCAGCCTTTGCCTCATGTATCAGAAGAGCCAATCAGATGGTGACCCCCACCTGCGAATTTCCTCAAACTAAACGT

Coding sequence (CDS)

GTGAGCGGTTTCCGGCTTCGATCCGGCAGCGGCGGAGCGGTTGACCATCTGCCGCTGCCTCACCACCATAGATTTATAGATCTCGAGGATCATCTTCTCGTCGTATTCCTTCGCCGGCCGCTGTCCGAAACCGGCAATGCCATCGCACACGGCAGCGCCGCCGCCGTAGCTGGTGGTGAAAACTCGGGAATTAGCGAACCCGAGCATCATATTGACGCGTCACGGAGGCGGAGGAGGAGTTTTTTCGGGGACGGAAGTTTTCGTAAGAATCGAAACTTCGGTGAGATCTTGATCCGCCAGAAGCGCCGCCGGGTGTTCCGGGTCGACCCGAGCTCCACCTGGGCCAGCCTCCGCCGTCGCCGCGACGACCCGTTAAGCTTCTCCCTGAATGGGTATCTTCACACAATAGAGAAATTAAGAAAGCGTGGGATTAAAGTGATACCTATTTGTCCGTGTTGTGAAAAGGAGGTGGAATCGATTGATCACGAGTTGAGTCAAGCGAGTTTCAACTTGTGTTTTGTTGATTGGTGGATCTCTCTAAGTTCCTCCTGCTCAAAAGAAGAGATTGAATTGATTAGTTTGGGGTGTTGGGCTATTTGGCTGGACAGAAATAAAATCATACATGACTCACCTGTTCCAAATCTAGAGTTAGTGGATCCTAAATTACGCCAAGGATTTTGCATAGAAATCTTTTGGGTCGAGGGGTCTGCTTCCCCCTCAGCCTTTGCCTCATGTATCAGAAGAGCCAATCAGATGGTGACCCCCACCTGCGAATTTCCTCAAACTAAACGT

Protein sequence

VSGFRLRSGSGGAVDHLPLPHHHRFIDLEDHLLVVFLRRPLSETGNAIAHGSAAAVAGGENSGISEPEHHIDASRRRRRSFFGDGSFRKNRNFGEILIRQKRRRVFRVDPSSTWASLRRRRDDPLSFSLNGYLHTIEKLRKRGIKVIPICPCCEKEVESIDHELSQASFNLCFVDWWISLSSSCSKEEIELISLGCWAIWLDRNKIIHDSPVPNLELVDPKLRQGFCIEIFWVEGSASPSAFASCIRRANQMVTPTCEFPQTKR

Homology

[Close]

BLAST of CcUC10G196350 vs. NCBI nr
Match: XP_030943489.1 (uncharacterized protein LOC115968280 [Quercus lobata])

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-06
Identity = 35/100 (35.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 129 LNGYLHTIEKLRKRGIKVIPICPCCEKEVESIDHELSQASFNL----CFVDWWISLSSS- 188
           LNG L T E L+KRGI +  +CPCC K+ ESI H L +  F      C+ +  I++SSS 
Sbjct: 106 LNG-LPTAENLKKRGINLSELCPCCGKDPESITHSLLRCEFAKKVWNCWQECPINISSSQ 165

Query: 189 -------------CSKEEIELISLGCWAIWLDRNKIIHDS 211
                         +  ++E+  +  W+IW +RN+++H+S
Sbjct: 166 WDFSDVALKILEQGTAADLEVFFVMAWSIWYNRNQVVHES 204

[Close]

BLAST of CcUC10G196350 vs. NCBI nr
Match: MBA0780198.1 (hypothetical protein [Gossypium trilobum])

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-05
Identity = 32/97 (32.99%), Postives = 45/97 (46.39%), Query Frame = 0


Query: 130 NGYLHTIEKLRKRGIKVIPICPCCEKEVESIDHELSQASF-----------------NLC 189
           N YL T+  L+ R + V  +CP C+ E ES+DH  S   F                    
Sbjct: 75  NDYLPTLHYLKARYLDVNTVCPVCQTEEESVDHLFSGCFFTQQVLRGLGVVVTTCNRETI 134

Query: 190 FVDWWISLSSSCSKEEIELISLGCWAIWLDRNKIIHD 210
           + +W      + S EE E+ ++  WAIW +RNKI HD
Sbjct: 135 WKNWLAKEFENLSIEECEIRAITYWAIWYNRNKIYHD 171

[Close]

BLAST of CcUC10G196350 vs. NCBI nr
Match: XP_021679286.1 (uncharacterized protein LOC110664066 [Hevea brasiliensis])

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-05
Identity = 33/106 (31.13%), Postives = 48/106 (45.28%), Query Frame = 0


Query: 139 LRKRGIKVIPICPCCEKEVESIDHEL------------SQASFN------LCFVDWWISL 198
           L  RGI V P CP C+ E E++ H L            S  ++N        F  WW+S+
Sbjct: 262 LAMRGIPVDPSCPVCKFEAETVKHMLFWCSHAKAAWFASSCNYNSNLIGFSSFAQWWMSI 321

Query: 199 SS--SCSKEEIELISLGCWAIWLDRNKIIHDSPVPNLELVDPKLRQ 225
                  +E I  I+  CW IW +RNK+  ++  PN   V  K+ +
Sbjct: 322 VQHFQGEQESINTIATACWIIWKERNKVTFNNSNPNPYFVAQKINR 367

[Close]

BLAST of CcUC10G196350 vs. NCBI nr
Match: ONM19438.1 (Signal peptide peptidase-like 3 [Zea mays])

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-05
Identity = 31/107 (28.97%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 135 TIEKLRKRGIKVIPICPCCEKEVESIDH----------------------ELSQASFNLC 194
           T ++L+KRG+  + +CP C++E E+I H                       LS  S    
Sbjct: 604 TADRLQKRGLDHLEVCPLCDQEPENIQHLLCTCVFSRQFWYYILSSLGMANLSPDSNESS 663

Query: 195 FVDWWISLSSSCSKEE----IELISLGCWAIWLDRNKIIHDSPVPNL 216
           F DWW  +S    K +      +I LG W + L RNK++ D   P++
Sbjct: 664 FADWWAKVSKQVHKSKRRGFNSIIILGAWCLCLHRNKVVFDGVSPSI 710

[Close]

BLAST of CcUC10G196350 vs. NCBI nr
Match: XP_035815471.1 (uncharacterized protein LOC100281651 isoform X1 [Zea mays])

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-04
Identity = 32/107 (29.91%), Postives = 47/107 (43.93%), Query Frame = 0


Query: 135  TIEKLRKRGIKVIPICPCCEKEVESIDHELSQASF----------------------NLC 194
            T ++LR+RG++   +C  C++E E++ H L   SF                       + 
Sbjct: 1048 TADRLRRRGLQHPAVCVLCDQEQETVQHLLCTCSFARQFWHAILVPLCLGDLIPAVDEIS 1107

Query: 195  FVDWWISLSSSCSKEEIE----LISLGCWAIWLDRNKIIHDSPVPNL 216
            F DWW        K   +    LI LG W IWL RNK + DS  P++
Sbjct: 1108 FADWWRKALKKVPKFRKKGFNSLIILGSWCIWLTRNKAVFDSVNPSM 1154

[Close]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL
Match: M5XIV5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa025799mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.5e-06
Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 131 GYLHTIEKLRKRGIKVIPICPCCEKEVESIDHELSQASFNLCFVDW--------WISLSS 190
           G+L + + L  R I   PICP C K+VESI+H +   + +    +W        W S+  
Sbjct: 718 GFLPSRQNLYHRKILNSPICPRCGKKVESINHAIWACNESANRHEWRITSFKELWQSVIV 777

Query: 191 SCSKEEIELISLGCWAIWLDRNKIIHDS-PVPNLELVDPKLRQGFCIEIFWVEG 236
             SKEE++L +  CW IW DRN ++     + ++ + +  L   + IE ++V+G
Sbjct: 778 VSSKEEVDLFAFLCWDIWNDRNNLLFQGRGLESVSVFNKAL--AYQIEFYYVKG 829

[Close]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL
Match: A0A0A9SM18 (TIDP2690 OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-06
Identity = 32/110 (29.09%), Postives = 49/110 (44.55%), Query Frame = 0


Query: 135 TIEKLRKRGIKVIPICPCCEKEVESIDHELSQASF----------------------NLC 194
           T ++L KRG++ +  CP C++E E++ H L+   F                        C
Sbjct: 149 TADRLEKRGLRHLECCPLCDQENETVQHLLTTCVFARQVWHKIFEPLGLLTLVPRRSEKC 208

Query: 195 FVDWWISLSSSCSKEEIE----LISLGCWAIWLDRNKIIHDSPVPNLELV 219
           F DWW        KE+ +    LI LG W IW  RN  + +   P+L++V
Sbjct: 209 FADWWRKSVRKGRKEQRKGLNTLIILGAWVIWKQRNSCVFNGTSPSLQMV 258

[Close]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL
Match: A0A0A9CVB5 (zf-RVT domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.6e-06
Identity = 32/110 (29.09%), Postives = 49/110 (44.55%), Query Frame = 0


Query: 135 TIEKLRKRGIKVIPICPCCEKEVESIDHELSQASF----------------------NLC 194
           T ++L KRG++ +  CP C++E E++ H L+   F                        C
Sbjct: 149 TADRLEKRGLRHLECCPLCDQENETVQHLLTTCVFARQVWHKIFEPLGLLTLVPRRSEKC 208

Query: 195 FVDWWISLSSSCSKEEIE----LISLGCWAIWLDRNKIIHDSPVPNLELV 219
           F DWW        KE+ +    LI LG W IW  RN  + +   P+L++V
Sbjct: 209 FADWWRKSVRKGRKEQRKGLNTLIILGAWVIWKHRNSCVFNGTSPSLQMV 258

[Close]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL
Match: A0A7J9F4U8 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_004332 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-05
Identity = 32/97 (32.99%), Postives = 45/97 (46.39%), Query Frame = 0


Query: 130 NGYLHTIEKLRKRGIKVIPICPCCEKEVESIDHELSQASF-----------------NLC 189
           N YL T+  L+ R + V  +CP C+ E ES+DH  S   F                    
Sbjct: 75  NDYLPTLHYLKARYLDVNTVCPVCQTEEESVDHLFSGCFFTQQVLRGLGVVVTTCNRETI 134

Query: 190 FVDWWISLSSSCSKEEIELISLGCWAIWLDRNKIIHD 210
           + +W      + S EE E+ ++  WAIW +RNKI HD
Sbjct: 135 WKNWLAKEFENLSIEECEIRAITYWAIWYNRNKIYHD 171

[Close]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL
Match: A0A1D6EH23 (Signal peptide peptidase-like 3 OS=Zea mays OX=4577 GN=100217036 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-05
Identity = 31/107 (28.97%), Postives = 48/107 (44.86%), Query Frame = 0


Query: 135 TIEKLRKRGIKVIPICPCCEKEVESIDH----------------------ELSQASFNLC 194
           T ++L+KRG+  + +CP C++E E+I H                       LS  S    
Sbjct: 604 TADRLQKRGLDHLEVCPLCDQEPENIQHLLCTCVFSRQFWYYILSSLGMANLSPDSNESS 663

Query: 195 FVDWWISLSSSCSKEE----IELISLGCWAIWLDRNKIIHDSPVPNL 216
           F DWW  +S    K +      +I LG W + L RNK++ D   P++
Sbjct: 664 FADWWAKVSKQVHKSKRRGFNSIIILGAWCLCLHRNKVVFDGVSPSI 710

The following BLAST results are available for this feature:

BLAST of CcUC10G196350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030943489.1	2.3e-06	35.00	uncharacterized protein LOC115968280 [Quercus lobata]	[more]
MBA0780198.1	4.4e-05	32.99	hypothetical protein [Gossypium trilobum]	[more]
XP_021679286.1	4.4e-05	31.13	uncharacterized protein LOC110664066 [Hevea brasiliensis]	[more]
ONM19438.1	5.8e-05	28.97	Signal peptide peptidase-like 3 [Zea mays]	[more]
XP_035815471.1	1.3e-04	29.91	uncharacterized protein LOC100281651 isoform X1 [Zea mays]	[more]

BLAST of CcUC10G196350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G196350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5XIV5	2.5e-06	31.58	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa025799mg PE=4 SV=1	[more]
A0A0A9SM18	4.3e-06	29.09	TIDP2690 OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A0A9CVB5	5.6e-06	29.09	zf-RVT domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A7J9F4U8	2.1e-05	32.99	Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_00433...	[more]
A0A1D6EH23	2.8e-05	28.97	Signal peptide peptidase-like 3 OS=Zea mays OX=4577 GN=100217036 PE=3 SV=1	[more]

BLAST of CcUC10G196350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G196350.1	CcUC10G196350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0031090	organelle membrane