
CcUC10G196160 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTAAGGTTTCTGGAGTTGCTAGTGTTTTGAATCCGTTAGGAATAATCGGAGGGCTTGGATCTCTCATCGTCAGGAATTTCTTCATCATCGTAGCCGCATCTACGGATCCAAAATCGGCTTCCGCAACACCAGGTTCCTGTTCCGAAATTCACGATTTCCGATACGTCACTTCATTTAATGCGATTCAACTCATTCAATTTCAGCGATTACATTCACAATTAGCGATTTGTAAGTTGACCTAATGCGACCGATTCATTCAATTTCAGAGATTATACAAGAGTGCGAAGATACCTGAAATCTACAAATGTAGAAATCATCGCCGAGGAAGAGGCGGAGACCGGCGAGAGGCGAGGTTACCGGATTCCGAGGAGTGTAATGAACACTCAAATTGACCAAAGCCTTGACTCGATCTGGCCTGAAAAGGCAAAAGTACCAAGCCATCATGGCGCCCCAATCGTGGCCTACCAAGAAAACTTGATCGATTCCGAGATGATCAAGGACTCCAATGAGATCGCCGATTATGTGGTGAGGTGTATAGGAGGAGGGAGACGGCGGCGCATCGGAGTCGCCGAAGCCGCGGAGGTCAGGGGCTATGGCTCGGAAGCCCTTGGAAGCGAGAAAGAGAAGCTGGTGGCGCCATGAGTACCAGAGCTCCGGGAAGCCGTGGAGTAGTAGGACCGCCGGACCGGAGCCAATGGAAGCGAGGTGGATGTTAATGCCATTGGTGGCGATGGTTGAGTGCTGGATTTTCTCCATTGATGAGTTTGTTTTGTTTCTTAACTCTGTCTCTGCGTTGGGTTTAATAGGAAGCTGGTGGTGCAAGACACACAAG ATGGAGTGTTTTGAATCCGTTAGGAATAATCGGAGGGCTTGGATCTCTCATCGTCAGGAATTTCTTCATCATCGTAGCCGCATCTACGGATCCAAAATCGGCTTCCGCAACACCAGAGATTATACAAGAGTGCGAAGATACCTGAAATCTACAAATGTAGAAATCATCGCCGAGGAAGAGGCGGAGACCGGCGAGAGGCGAGGTTACCGGATTCCGAGGAGTGTAATGAACACTCAAATTGACCAAAGCCTTGACTCGATCTGGCCTGAAAAGGCAAAAGTACCAAGCCATCATGGCGCCCCAATCGTGGCCTACCAAGAAAACTTGATCGATTCCGAGATGATCAAGGACTCCAATGAGATCGCCGATTATGTGGAGGAGGGAGACGGCGGCGCATCGGAGTCGCCGAAGCCGCGGAGGTCAGGGGCTATGGCTCGGAAGCCCTTGGAAGCGAGAAAGAGAAGCTGGTGGCGCCATGAGTACCAGAGCTCCGGGAAGCCGTGGAGTAGTAGGACCGCCGGACCGGAGCCAATGGAAGCGAGGTGGATGTTAATGCCATTGGTGGCGATGGTTGAGTGCTGGATTTTCTCCATTGATGAGTTTGTTTTGTTTCTTAACTCTGTCTCTGCGTTGGGTTTAATAGGAAGCTGGTGGTGCAAGACACACAAG ATGGAGTGTTTTGAATCCGTTAGGAATAATCGGAGGGCTTGGATCTCTCATCGTCAGGAATTTCTTCATCATCGTAGCCGCATCTACGGATCCAAAATCGGCTTCCGCAACACCAGAGATTATACAAGAGTGCGAAGATACCTGAAATCTACAAATGTAGAAATCATCGCCGAGGAAGAGGCGGAGACCGGCGAGAGGCGAGGTTACCGGATTCCGAGGAGTGTAATGAACACTCAAATTGACCAAAGCCTTGACTCGATCTGGCCTGAAAAGGCAAAAGTACCAAGCCATCATGGCGCCCCAATCGTGGCCTACCAAGAAAACTTGATCGATTCCGAGATGATCAAGGACTCCAATGAGATCGCCGATTATGTGGAGGAGGGAGACGGCGGCGCATCGGAGTCGCCGAAGCCGCGGAGGTCAGGGGCTATGGCTCGGAAGCCCTTGGAAGCGAGAAAGAGAAGCTGGTGGCGCCATGAGTACCAGAGCTCCGGGAAGCCGTGGAGTAGTAGGACCGCCGGACCGGAGCCAATGGAAGCGAGGTGGATGTTAATGCCATTGGTGGCGATGGTTGAGTGCTGGATTTTCTCCATTGATGAGTTTGTTTTGTTTCTTAACTCTGTCTCTGCGTTGGGTTTAATAGGAAGCTGGTGGTGCAAGACACACAAG MECFESVRNNRRAWISHRQEFLHHRSRIYGSKIGFRNTRDYTRVRRYLKSTNVEIIAEEEAETGERRGYRIPRSVMNTQIDQSLDSIWPEKAKVPSHHGAPIVAYQENLIDSEMIKDSNEIADYVEEGDGGASESPKPRRSGAMARKPLEARKRSWWRHEYQSSGKPWSSRTAGPEPMEARWMLMPLVAMVECWIFSIDEFVLFLNSVSALGLIGSWWCKTHK Homology
BLAST of CcUC10G196160 vs. NCBI nr
Match: PON88840.1 (hypothetical protein TorRG33x02_153550 [Trema orientale]) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of CcUC10G196160 vs. NCBI nr
Match: GER35206.1 (ABC-2 type transporter family protein [Striga asiatica]) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-04 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of CcUC10G196160 vs. ExPASy TrEMBL
Match: A0A2P5ETH5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_153550 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.6e-08 Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of CcUC10G196160 vs. ExPASy TrEMBL
Match: A0A0A9VMG5 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.0e-05 Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of CcUC10G196160 vs. ExPASy TrEMBL
Match: A0A5A7PRC8 (ABC-2 type transporter family protein OS=Striga asiatica OX=4170 GN=STAS_11466 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.2e-05 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of CcUC10G196160 vs. ExPASy TrEMBL
Match: A0A0A9UKE9 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04 Identity = 29/54 (53.70%), Postives = 31/54 (57.41%), Query Frame = 0
BLAST of CcUC10G196160 vs. ExPASy TrEMBL
Match: A0A2P5BUA3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_209710 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 9.9e-04 Identity = 35/108 (32.41%), Postives = 60/108 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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