CcUC10G196140 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G196140
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	indole-3-acetic acid-induced protein ARG2-like
Location	CicolChr10: 22014387 .. 22015772 (+)
RNA-Seq Expression	CcUC10G196140
Synteny	CcUC10G196140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAATACTGTGAGACGTAGAAAAAATAAGGCTTTCCTTTTTCCCTCTCTTTTTACTCAAAATTTTCCCCAGAAACGAACAGAAAGTTTCTTCTGTACAACCCATTCATGATGGGTCGCTTCTTCTCCGGCGTCAATATCATGTCCGGTCTCCTTCCCCATGGATTTTTTCACGCTCTCATCGGGTATTTATATATCTATCAAAAACAAATAATACAAAACATTGCTTCTGAAGTTCTTATTTGATAATATTTAGTTTTAGAAAACTCATTCATATTTTCTAAATTTTGTAAAGAATTCAAGTGTTTTAAGTTACAAAGATGAAATCATGGTAAAGACCAAAAACTAAAAACCAAATAACTTGATTAAAATATTAAAGATCGCCAACCCTTTATAATTTTTAAAGATTTCTTTTTCCTTTAATAAAATCTACTTTTAACGTGGTGTGCTTGGACAGGCGTGGATATACGGCGGAATCAATGGCGGCATCACAAAGAGTGGCGTCTAGCGCGGCGGCGGAAGTAGTTCCGGCACGAACCCACGTAATGATGAAGAAAGAAGAAGCAGAAATAAGTACGGAGAAGGCGGCGTGGGTACCAGACCCTGTCACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCCGTGGATCTTCGTGCTAAGCTATTGAAGCCGACAGGAAATATAATCAATTGAATTAAAGGAATAAAAAAGCTAAAGTTTGGATCCCATCATAATAGTAATAGTAACAGCAATTATAATAAATTTAAAAGTAATATTAAAAAGTTTAATTTATATATGGGCTACAAGAATGTTACAAATATGGAAAAATTCGGAAATATTGTACATTAAACTGGTATTTTCCAAAACTGTTTATATATCTTAATAGTCATAAGAATGAAATCAAAATATGAATATATAAACACGAATAAAAATAAAAATTTGTAACCATGATTCTAGATTAAATGCAATCTATCGAAATTGAGGATTGAGTAAAAAGAATTGGACGAATTTGTAATGATTAAAAAAAATATATATTTTCATAAACAAAAACTAATTTTGATTTTTAATTATAAAATAACATGAATGTTAAATATGAGAGAAAGTGTCCATCATACCCCTCAATTCTAGGAATAAAACTACAACAAATTTAGTGATGATTTATAGTGTTGTTAATGTTTATTAAAAAATGAAATTTCTAAAAAAAGTAATCGATTTGAATTTTTTTTAATATTTTAATTATTAAATAATTCAGAAATTAATGTATCAAAATGTTAAAATCGCAAAAATCTAGCTTTGAAATATATTAAAATTTAGTACATGTATGAAATATTAAGGTTAATTTCCTAATCTTTCTTTCCCTTAATGTACATCTGGG

mRNA sequence

CTCAAATACTGTGAGACGTAGAAAAAATAAGGCTTTCCTTTTTCCCTCTCTTTTTACTCAAAATTTTCCCCAGAAACGAACAGAAAGTTTCTTCTGTACAACCCATTCATGATGGGTCGCTTCTTCTCCGGCGTCAATATCATGTCCGGTCTCCTTCCCCATGGATTTTTTCACGCTCTCATCGGGCGTGGATATACGGCGGAATCAATGGCGGCATCACAAAGAGTGGCGTCTAGCGCGGCGGCGGAAGTAGTTCCGGCACGAACCCACGTAATGATGAAGAAAGAAGAAGCAGAAATAAGTACGGAGAAGGCGGCGTGGGTACCAGACCCTGTCACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCCGTGGATCTTCGTGCTAAGCTATTGAAGCCGACAGGAAATATAATCAATTGAATTAAAGGAATAAAAAAGCTAAAGTTTGGATCCCATCATAATAGTAATAGTAACAGCAATTATAATAAATTTAAAAGTAATATTAAAAAGTTTAATTTATATATGGGCTACAAGAATGTTACAAATATGGAAAAATTCGGAAATATTGTACATTAAACTGGTATTTTCCAAAACTGTTTATATATCTTAATAGTCATAAGAATGAAATCAAAATATGAATATATAAACACGAATAAAAATAAAAATTTGTAACCATGATTCTAGATTAAATGCAATCTATCGAAATTGAGGATTGAGTAAAAAGAATTGGACGAATTTGTAATGATTAAAAAAAATATATATTTTCATAAACAAAAACTAATTTTGATTTTTAATTATAAAATAACATGAATGTTAAATATGAGAGAAAGTGTCCATCATACCCCTCAATTCTAGGAATAAAACTACAACAAATTTAGTGATGATTTATAGTGTTGTTAATGTTTATTAAAAAATGAAATTTCTAAAAAAAGTAATCGATTTGAATTTTTTTTAATATTTTAATTATTAAATAATTCAGAAATTAATGTATCAAAATGTTAAAATCGCAAAAATCTAGCTTTGAAATATATTAAAATTTAGTACATGTATGAAATATTAAGGTTAATTTCCTAATCTTTCTTTCCCTTAATGTACATCTGGG

Coding sequence (CDS)

ATGATGGGTCGCTTCTTCTCCGGCGTCAATATCATGTCCGGTCTCCTTCCCCATGGATTTTTTCACGCTCTCATCGGGCGTGGATATACGGCGGAATCAATGGCGGCATCACAAAGAGTGGCGTCTAGCGCGGCGGCGGAAGTAGTTCCGGCACGAACCCACGTAATGATGAAGAAAGAAGAAGCAGAAATAAGTACGGAGAAGGCGGCGTGGGTACCAGACCCTGTCACCGGCTACTACCGGCCGGAGAATTACGCCGATGAGATCGACGCCGTGGATCTTCGTGCTAAGCTATTGAAGCCGACAGGAAATATAATCAATTGA

Protein sequence

MMGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNIIN

Homology

[Close]

BLAST of CcUC10G196140 vs. NCBI nr
Match: XP_038903721.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M  FFSG  IMS L+PHG FHAL  RGYTAE+MAASQRVAS++AAE +PAR++ MMKKEE
Sbjct: 1   MACFFSG-KIMSSLVPHGSFHALFRRGYTAEAMAASQRVASTSAAEGIPARSNGMMKKEE 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNIIN 108
           +E STEKAAWVPDPVTGYYRPENYAD IDAVDLRAKLLKP  NIIN
Sbjct: 61  SETSTEKAAWVPDPVTGYYRPENYADVIDAVDLRAKLLKPRRNIIN 105

[Close]

BLAST of CcUC10G196140 vs. NCBI nr
Match: KAG7018001.1 (Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 67/106 (63.21%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKK-E 61
           M RFFSGV I+SGL+  G  +ALI RGYTAE+MAAS+R           AR   MMKK E
Sbjct: 1   MARFFSGVKIISGLVSDGLSNALIRRGYTAEAMAASKRA----------ARDDGMMKKGE 60

Query: 62  EAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNII 107
           +AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+P    I
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of CcUC10G196140 vs. NCBI nr
Match: XP_022934354.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-23
Identity = 67/106 (63.21%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKK-E 61
           M RFFSGV I+SGL+  G   ALI RGYTAE+MAAS+R           AR   MMKK E
Sbjct: 1   MARFFSGVKIISGLVSDGLSEALIRRGYTAEAMAASKRA----------ARDDGMMKKGE 60

Query: 62  EAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNII 107
           +AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+P    I
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of CcUC10G196140 vs. NCBI nr
Match: XP_023528769.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-23
Identity = 68/106 (64.15%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M RF SGV I+SGL+  G  +ALI RGYTAE+MAASQR           AR   MMKKEE
Sbjct: 1   MARFCSGVKIISGLVSDGLSNALIRRGYTAEAMAASQRA----------ARDDGMMKKEE 60

Query: 62  -AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNII 107
            AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+P    I
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of CcUC10G196140 vs. NCBI nr
Match: XP_022984078.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 9.4e-23
Identity = 66/99 (66.67%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M RFFSGV I SGL+  G  +ALI RGYTAE+MAASQR           AR   MMKKEE
Sbjct: 1   MARFFSGVKITSGLVSDGLSNALIRRGYTAEAMAASQRA----------ARDDGMMKKEE 60

Query: 62  -AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA ++
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMM 89

[Close]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-12
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  S V I+S  +     +A+  RGY A   AA   V+S   +  V +    +MKK+ 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAA--TAAQGSVSSGGRSGAVAS---AVMKKKG 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            E ST+K +WVPDP TGYYRPE  ++EIDA +LRA LL
Sbjct: 61  VEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALL 93

[Close]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.3e-10
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMA--ASQRVASSAAAEVVPARTHVMMKK 61
           M R F+ V ++S L+  GF +     G+ A + A  ++ R  +S    +VP         
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVP------KSG 60

Query: 62  EEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
           EE     EK +WVPDPVTGYYRPEN  +EID  D+RA +L
Sbjct: 61  EEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVL 93

[Close]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.6e-09
Identity = 39/98 (39.80%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  +   I S        +A+  RG+ A +  A     S+A            MKK  
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALDGSVSTAE-----------MKKRA 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            E S+EKA WVPDP TGYYRPE  ++EID  +LRA LL
Sbjct: 61  GEASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILL 87

[Close]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-08
Identity = 35/98 (35.71%), Postives = 46/98 (46.94%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  S   ++   +  G + ++  RGY+    AA         A     R   M +   
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
           +E     +AW PDPVTGYYRPEN   EIDA +LR  LL
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLL 98

[Close]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 34/98 (34.69%), Postives = 45/98 (45.92%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  S    +   +    + ++  RGY+    AA         A     R + M +   
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
           +E     +AW PDPVTGYYRPEN   EIDA DLR  +L
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMML 98

[Close]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL
Match: A0A6J1F2C1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441545 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.2e-24
Identity = 67/106 (63.21%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKK-E 61
           M RFFSGV I+SGL+  G   ALI RGYTAE+MAAS+R           AR   MMKK E
Sbjct: 1   MARFFSGVKIISGLVSDGLSEALIRRGYTAEAMAASKRA----------ARDDGMMKKGE 60

Query: 62  EAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNII 107
           +AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+P    I
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMLQPRRKFI 96

[Close]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL
Match: A0A6J1J9I8 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482498 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.6e-23
Identity = 66/99 (66.67%), Postives = 72/99 (72.73%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M RFFSGV I SGL+  G  +ALI RGYTAE+MAASQR           AR   MMKKEE
Sbjct: 1   MARFFSGVKITSGLVSDGLSNALIRRGYTAEAMAASQRA----------ARDDGMMKKEE 60

Query: 62  -AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA ++
Sbjct: 61  QAERSREKVAWVPDPVTGYYRPENYSDEIDAVDLRAMMM 89

[Close]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL
Match: A0A0A0KV78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001860 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.3e-21
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MMGRFFSGVNIMSGLLPHGFFHALIGRGYTAE--SMAASQRVASS--AAAEVVPARTH-- 60
           M  RF SGV ++ G +  GF +A++ RGYTAE  +MAAS+R  +S  AA  V+PA     
Sbjct: 1   MAPRFSSGVKVLPGFVFDGFLNAIVRRGYTAEPMAMAASERATTSTPAAGGVLPATRSDG 60

Query: 61  VMMKKEEAEISTEKAA-WVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNIIN 108
           V+++KEE+E STEKAA W+PDPVTG YRPE+  DE+DAVDLRAKLLKP  N +N
Sbjct: 61  VIVEKEESERSTEKAAVWIPDPVTGCYRPESNMDEMDAVDLRAKLLKPRRNTVN 114

[Close]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL
Match: A0A1S4DZQ1 (indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103494762 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.3e-21
Identity = 68/114 (59.65%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 1   MMGRFFSGVNIMSGLLPHGFFHALIGRGYTAE--SMAASQRVAS-SAAAEVVPAR-THVM 60
           M  RF S V I+ GL+  GF +A+I RGYTAE  +MAAS+RV S SA   V+PA  +  +
Sbjct: 1   MAPRFSSAVKIVPGLVLDGFLNAIIRRGYTAEAMAMAASERVTSTSAGGGVLPAAGSDGV 60

Query: 61  MKKEEAEISTEK---AAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNIIN 108
           MKKEE+E ST +   AAW+PDPVTGYYRPENY DE+D VDLR KLLK   N IN
Sbjct: 61  MKKEESERSTTEKAAAAWMPDPVTGYYRPENYVDEMDPVDLRDKLLKARRNTIN 114

[Close]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL
Match: A0A6J1GAX2 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452505 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  S V  +S L+      +LI RGY A + AASQRVAS  AAE V AR+  M+KKEE
Sbjct: 1   MARSLSRVMNISSLV------SLIRRGYRAGATAASQRVASGTAAEGVTARSGGMIKKEE 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPTGNIIN 108
            E  TE AAW+PDPVTGYYRPENY + ID VDLRA LLKP  N++N
Sbjct: 61  EERRTEMAAWIPDPVTGYYRPENYTNVIDEVDLRAMLLKPKRNVMN 100

[Close]

BLAST of CcUC10G196140 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 )

HSP 1 Score: 71.6 bits (174), Expect = 4.2e-13
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  S V I+S  +     +A+  RGY A   AA   V+S   +  V +    +MKK+ 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAA--TAAQGSVSSGGRSGAVAS---AVMKKKG 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            E ST+K +WVPDP TGYYRPE  ++EIDA +LRA LL
Sbjct: 61  VEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALL 93

[Close]

BLAST of CcUC10G196140 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 )

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 27  RGYTAESMAASQRVASSAAAEVVPARTHVMMKKEEAEISTEKAAWVPDPVTGYYRPENYA 86
           RGY A   AA   V+S   +  V +    +MKK+  E ST+K +WVPDP TGYYRPE  +
Sbjct: 7   RGYAA--TAAQGSVSSGGRSGAVAS---AVMKKKGVEESTQKISWVPDPKTGYYRPETGS 66

Query: 87  DEIDAVDLRAKLL 100
           +EIDA +LRA LL
Sbjct: 67  NEIDAAELRAALL 74

[Close]

BLAST of CcUC10G196140 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 39/98 (39.80%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 2   MGRFFSGVNIMSGLLPHGFFHALIGRGYTAESMAASQRVASSAAAEVVPARTHVMMKKEE 61
           M R  +   I S        +A+  RG+ A +  A     S+A            MKK  
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALDGSVSTAE-----------MKKRA 60

Query: 62  AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL 100
            E S+EKA WVPDP TGYYRPE  ++EID  +LRA LL
Sbjct: 61  GEASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILL 87

[Close]

BLAST of CcUC10G196140 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 )

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 34  MAASQRVASSAAAEVVPARTHVMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVD 93
           +A SQ V ++  ++    R  V   ++       ++AW PDPVTGYYRP N A EID  +
Sbjct: 32  VATSQNVTAAGLSKGGSTRVMVGKMEQRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAE 91

Query: 94  LRAKLLK 101
           LR  LLK
Sbjct: 92  LRELLLK 98

[Close]

BLAST of CcUC10G196140 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-06
Identity = 19/30 (63.33%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 67  EKAAWVPDPVTGYYRPENYADEIDAVDLRA 97
           E+  W+PDP TGYYRP+N+A E+DAV+LR+
Sbjct: 82  EELWWMPDPQTGYYRPDNFARELDAVELRS 111

The following BLAST results are available for this feature:

BLAST of CcUC10G196140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903721.1	7.4e-36	79.25	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]	[more]
KAG7018001.1	1.5e-23	63.21	Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp...	[more]
XP_022934354.1	1.9e-23	63.21	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]	[more]
XP_023528769.1	1.9e-23	64.15	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp....	[more]
XP_022984078.1	9.4e-23	66.67	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of CcUC10G196140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WF6	6.0e-12	44.90	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
P32292	7.3e-10	40.00	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9SRX6	3.6e-09	39.80	Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2...	[more]
P46522	4.0e-08	35.71	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]
P46521	1.2e-07	34.69	Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]

BLAST of CcUC10G196140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2C1	9.2e-24	63.21	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata ...	[more]
A0A6J1J9I8	4.6e-23	66.67	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita maxima OX...	[more]
A0A0A0KV78	7.3e-21	57.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001860 PE=4 SV=1	[more]
A0A1S4DZQ1	7.3e-21	59.65	indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1GAX2	1.6e-20	59.43	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata ...	[more]

BLAST of CcUC10G196140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02380.1	4.2e-13	44.90	senescence-associated gene 21	[more]
AT4G02380.2	2.0e-10	50.68	senescence-associated gene 21	[more]
AT1G02820.1	2.6e-10	39.80	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G15910.1	5.9e-07	41.79	drought-induced 21	[more]
AT3G53770.1	2.2e-06	63.33	late embryogenesis abundant 3 (LEA3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 2..99 e-value: 1.4E-24 score: 86.6
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PANTHER	PTHR33509	LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED	coord: 2..101
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENIS ABUNDANT PROTEIN 2	coord: 2..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G196140.1	CcUC10G196140.1	mRNA