CcUC10G195180 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G195180
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Phytosulfokine-beta
Location	CicolChr10: 20126686 .. 20127450 (+)
RNA-Seq Expression	CcUC10G195180
Synteny	CcUC10G195180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAACTCATGTTATGTTAAGAAAATCCATGCTGGTTGCTTTTGCCTTGAACTTCCAGTTTTGCCCTTGCACAATGCCTTTATATTCATTTCCACAGTTCTTCCTCTTCCAATCTCTCTCTCTCATATGGCTTCCAAACTTTTAACTTCCATCTTCACACTTCTCTTCCTTTACCTCTTTTTTTCCTCCTCTTTGATGACCACCATTGCTGCTCGGCCCGTGCCCGGTTTTTCAAATGCTTTTCCCAGAACTTCTCGAGATGGGGTACGTAAATTTATCAGCATTTTCTCTTGTTAATATCATCTTTTGGGAAGAAAGAAAAGTAAGTATTTTTACTTTTTGGGTTGTAGTTAAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGTAGATTATATCTACACAGATGCTCAGAAGCCATGAGATTATTTGCACATTTAATTTTCACTTTTTAGGTTTTTTCCCCATTGTACATTCTCACTCATAATAGATTTAAGGGTATTAAAATGAAAATGTGACAAAGGAAGAGAATCTTTTGCAGCTTTCTCTTCATTTTTGGAAAAATTGATCTCATTAATTTTGTTTAATTAGTGTGAGTAATGGTTAATTTTAATATAGTCCTAGTCAAAAGAAACTAGATCTATAAAGTTTCTTAGGGTCATGTTATCATAATTTTGTATTACTATGTAAATTTGTTTGATTGGATCC

mRNA sequence

AAAAAAAAACTCATGTTATGTTAAGAAAATCCATGCTGGTTGCTTTTGCCTTGAACTTCCAGTTTTGCCCTTGCACAATGCCTTTATATTCATTTCCACAGTTCTTCCTCTTCCAATCTCTCTCTCTCATATGGCTTCCAAACTTTTAACTTCCATCTTCACACTTCTCTTCCTTTACCTCTTTTTTTCCTCCTCTTTGATGACCACCATTGCTGCTCGGCCCGTGCCCGGTTTTTCAAATGCTTTTCCCAGAACTTCTCGAGATGGGTTAAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGTAGATTATATCTACACAGATGCTCAGAAGCCATGAGATTATTTGCACATTTAATTTTCACTTTTTAGGTTTTTTCCCCATTGTACATTCTCACTCATAATAGATTTAAGGGTATTAAAATGAAAATGTGACAAAGGAAGAGAATCTTTTGCAGCTTTCTCTTCATTTTTGGAAAAATTGATCTCATTAATTTTGTTTAATTAGTGTGAGTAATGGTTAATTTTAATATAGTCCTAGTCAAAAGAAACTAGATCTATAAAGTTTCTTAGGGTCATGTTATCATAATTTTGTATTACTATGTAAATTTGTTTGATTGGATCC

Coding sequence (CDS)

ATGGCTTCCAAACTTTTAACTTCCATCTTCACACTTCTCTTCCTTTACCTCTTTTTTTCCTCCTCTTTGATGACCACCATTGCTGCTCGGCCCGTGCCCGGTTTTTCAAATGCTTTTCCCAGAACTTCTCGAGATGGGTTAAAGGTTGTGGATGATGTTTTGGAGGAGGAGAGTTGTGATGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGTAGATTATATCTACACAGATGCTCAGAAGCCATGA

Protein sequence

MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCDEIGEEYCLMRKTLAAHVDYIYTDAQKP

Homology

[Close]

BLAST of CcUC10G195180 vs. NCBI nr
Match: XP_004150263.1 (phytosulfokines 3 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCD 60
          MASKL TSI+  LFL+LFFSSS  T IAARPVPGFSNAF  TSRDG+ V DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEEYCLMRKTLAAHVDYIYTDAQKP 88
          EIGEEYCLMRKTLAAHVDYIYTD QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

[Close]

BLAST of CcUC10G195180 vs. NCBI nr
Match: KAA0044319.1 (Phytosulfokines 3 precursor family protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 9.4e-29
Identity = 71/87 (81.61%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCD 60
          MASKL TSI+  LFL+LFFSSS  T +AARPVPGFSNAF  TSRDG  VVDDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLGTSRDG--VVDDVLEEESCD 60

Query: 61 EIGEEYCLMRKTLAAHVDYIYTDAQKP 88
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 85

[Close]

BLAST of CcUC10G195180 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.4 bits (324), Expect = 1.5e-26
Identity = 70/88 (79.55%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAAR--PVPGFSNAFPRTSRDGLKVVDDVLEEES 60
          MASKLLTSIFT LFL+  F SS  TTI AR  PVPGFSNAFP TSRDGLK  DD LEEES
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSS-ATTIGARPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEEYCLMRKTLAAHVDYIYTDAQK 87
          C+EIGEEYCLMRKTLAAH DYIYTD+Q+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of CcUC10G195180 vs. NCBI nr
Match: KAG7014931.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.9 bits (320), Expect = 4.3e-26
Identity = 69/88 (78.41%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAAR--PVPGFSNAFPRTSRDGLKVVDDVLEEES 60
          MASKLLTSIFT LFL+  F SS  TTI A+  PVPGFSNAFP TSRDGLK  DD LEEES
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSS-ATTIGAQPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEEYCLMRKTLAAHVDYIYTDAQK 87
          C+EIGEEYCLMRKTLAAH DYIYTD+Q+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of CcUC10G195180 vs. NCBI nr
Match: XP_022149343.1 (phytosulfokines-like [Momordica charantia])

HSP 1 Score: 127.5 bits (319), Expect = 5.7e-26
Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFL-YLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESC 60
          MASKLLT+ FT L L + FF SSL  T+AARPVP F NAFP T+R GLKVVDDVLEEESC
Sbjct: 1  MASKLLTTFFTFLSLFFFFFFSSLAITVAARPVPDFPNAFPATTRHGLKVVDDVLEEESC 60

Query: 61 DEIGEEYCLMRKTLAAHVDYIYTDAQKP 88
            IGEEYCLMRKTLAAH+DYIYTD Q+P
Sbjct: 61 GGIGEEYCLMRKTLAAHLDYIYTDNQEP 88

[Close]

BLAST of CcUC10G195180 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-09
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCD 60
          M+SK +    TLL + L FS SL    AARP+       P  S   + V+ + + +E+C+
Sbjct: 1  MSSKAI----TLLLIALLFSLSLAQ--AARPLQ------PADSTKSVHVIPEKVHDEACE 60

Query: 61 EIGEEYCLMRKTLAAHVDYIYTDAQKP 88
           +GEE CLMR+TL AHVDYIYT    P
Sbjct: 61 GVGEEECLMRRTLTAHVDYIYTQDHNP 75

[Close]

BLAST of CcUC10G195180 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 10 FTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVD-DVLEEESCDEIGEEYCL 69
          FT +F+      S + T AAR  P  + A  R   + +K ++ D +EEESC+ IGEE CL
Sbjct: 4  FTTIFIMALLLCSTL-TYAARLTPTTTTALSR--ENSVKEIEGDKVEEESCNGIGEEECL 63

Query: 70 MRKTLAAHVDYIYTDAQKP 88
          +R++L  H DYIYT   KP
Sbjct: 64 IRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of CcUC10G195180 vs. ExPASy Swiss-Prot
Match: Q9SZG4 (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-06
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 6  LTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRD--GLKVVDDVLEE---ESCD 65
          + ++ TL+ + L   ++ M T +ARP P +  +F  +  D   L++++  L E   ESCD
Sbjct: 1  MANLSTLITIALLLCAT-MLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCD 60

Query: 66 EIGEEYCLMRKTLAAHVDYIYT 83
          +  +E CL+R+TL AH+DYIYT
Sbjct: 61 KEDDEDCLVRRTLTAHLDYIYT 81

[Close]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL
Match: A0A0A0KY18 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCD 60
          MASKL TSI+  LFL+LFFSSS  T IAARPVPGFSNAF  TSRDG+ V DDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPIAARPVPGFSNAFLGTSRDGVVVEDDVLEEESCD 60

Query: 61 EIGEEYCLMRKTLAAHVDYIYTDAQKP 88
          EIGEEYCLMRKTLAAHVDYIYTD QKP
Sbjct: 61 EIGEEYCLMRKTLAAHVDYIYTDTQKP 87

[Close]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL
Match: A0A5A7TSX1 (Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00410 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.5e-29
Identity = 71/87 (81.61%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESCD 60
          MASKL TSI+  LFL+LFFSSS  T +AARPVPGFSNAF  TSRDG  VVDDVLEEESCD
Sbjct: 1  MASKLFTSIYPFLFLFLFFSSSSTTPVAARPVPGFSNAFLGTSRDG--VVDDVLEEESCD 60

Query: 61 EIGEEYCLMRKTLAAHVDYIYTDAQKP 88
          EIGE+YCLMRKT+AAHVDYIYTD+QKP
Sbjct: 61 EIGEDYCLMRKTVAAHVDYIYTDSQKP 85

[Close]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL
Match: A0A6J1E4U5 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.2e-27
Identity = 70/88 (79.55%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFLYLFFSSSLMTTIAAR--PVPGFSNAFPRTSRDGLKVVDDVLEEES 60
          MASKLLTSIFT LFL+  F SS  TTI AR  PVPGFSNAFP TSRDGLK  DD LEEES
Sbjct: 1  MASKLLTSIFTFLFLFFSFVSS-ATTIGARPVPVPGFSNAFPGTSRDGLKAGDDALEEES 60

Query: 61 CDEIGEEYCLMRKTLAAHVDYIYTDAQK 87
          C+EIGEEYCLMRKTLAAH DYIYTD+Q+
Sbjct: 61 CEEIGEEYCLMRKTLAAHADYIYTDSQR 87

[Close]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL
Match: A0A6J1D6J2 (Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26
Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MASKLLTSIFTLLFL-YLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVDDVLEEESC 60
          MASKLLT+ FT L L + FF SSL  T+AARPVP F NAFP T+R GLKVVDDVLEEESC
Sbjct: 1  MASKLLTTFFTFLSLFFFFFFSSLAITVAARPVPDFPNAFPATTRHGLKVVDDVLEEESC 60

Query: 61 DEIGEEYCLMRKTLAAHVDYIYTDAQKP 88
            IGEEYCLMRKTLAAH+DYIYTD Q+P
Sbjct: 61 GGIGEEYCLMRKTLAAHLDYIYTDNQEP 88

[Close]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL
Match: A0A6J1JBS4 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1   MASKLLTSIFTLLFLYLFFSSSLMTTIAAR--PVPGFSNAFPRTSRDGLKVVDDVLEEES 60
           MA KLLTSIFT LFL+  F SS +TTI AR  PVPGFSNAFP TSRD LK  DD LEEES
Sbjct: 37  MAPKLLTSIFTFLFLFFSFVSS-VTTIGARPVPVPGFSNAFPGTSRDELKAGDDALEEES 96

Query: 61  CDEIGEEYCLMRKTLAAHVDYIYTDAQK 87
           C+EIGEEYCLMRKTLAAH DYIYTD+Q+
Sbjct: 97  CEEIGEEYCLMRKTLAAHADYIYTDSQR 123

[Close]

BLAST of CcUC10G195180 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor )

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 10 FTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKVVD-DVLEEESCDEIGEEYCL 69
          FT +F+      S + T AAR  P  + A  R   + +K ++ D +EEESC+ IGEE CL
Sbjct: 4  FTTIFIMALLLCSTL-TYAARLTPTTTTALSR--ENSVKEIEGDKVEEESCNGIGEEECL 63

Query: 70 MRKTLAAHVDYIYTDAQKP 88
          +R++L  H DYIYT   KP
Sbjct: 64 IRRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of CcUC10G195180 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor )

HSP 1 Score: 51.6 bits (122), Expect = 3.7e-07
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 6  LTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRD--GLKVVDDVLEE---ESCD 65
          + ++ TL+ + L   ++ M T +ARP P +  +F  +  D   L++++  L E   ESCD
Sbjct: 1  MANLSTLITIALLLCAT-MLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCD 60

Query: 66 EIGEEYCLMRKTLAAHVDYIYT 83
          +  +E CL+R+TL AH+DYIYT
Sbjct: 61 KEDDEDCLVRRTLTAHLDYIYT 81

[Close]

BLAST of CcUC10G195180 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor )

HSP 1 Score: 42.4 bits (98), Expect = 2.2e-04
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 6  LTSIFTLLFLYLFFSSSLMTTIAARPVPGFSNAFPRTSRDGLKV-------VDDV-LEEE 65
          + ++  LL + L   S+LM T  ARP P  S +   T+ D   +       +DD+ + +E
Sbjct: 1  MANVSALLTIALLLCSTLMCT--ARPEPAISISI-TTAADPCNMEKKIEGKLDDMHMVDE 60

Query: 66 SCDEIGEEYCLMRKTLAAHVDYIYTDAQK 87
          +C    +E CLMR+TL AH DYIYT  +K
Sbjct: 61 NCG-ADDEDCLMRRTLVAHTDYIYTQKKK 85

[Close]

BLAST of CcUC10G195180 vs. TAIR 10
Match: AT5G65870.1 (phytosulfokine 5 precursor )

HSP 1 Score: 40.4 bits (93), Expect = 8.5e-04
Identity = 18/33 (54.55%), Postives = 22/33 (66.67%), Query Frame = 0


Query: 56 EESCDEIGEEYC-LMRKTLAAHVDYIYTDAQKP 88
          E  C+ +GEE C L+R+TL AH DYIYT    P
Sbjct: 45 EVICEGVGEEECFLIRRTLVAHTDYIYTQNHNP 77

The following BLAST results are available for this feature:

BLAST of CcUC10G195180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150263.1	2.9e-30	83.91	phytosulfokines 3 [Cucumis sativus]	[more]
KAA0044319.1	9.4e-29	81.61	Phytosulfokines 3 precursor family protein [Cucumis melo var. makuwa]	[more]
XP_022922962.1	1.5e-26	79.55	phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, parti...	[more]
KAG7014931.1	4.3e-26	78.41	Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022149343.1	5.7e-26	76.14	phytosulfokines-like [Momordica charantia]	[more]

BLAST of CcUC10G195180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FS10	8.5e-09	43.68	Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1	[more]
Q9M2Y0	1.6e-07	43.04	Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2	[more]
Q9SZG4	5.2e-06	37.80	Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1	[more]

BLAST of CcUC10G195180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY18	1.4e-30	83.91	Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1	[more]
A0A5A7TSX1	4.5e-29	81.61	Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G0...	[more]
A0A6J1E4U5	7.2e-27	79.55	Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1	[more]
A0A6J1D6J2	2.7e-26	76.14	Phytosulfokine-beta OS=Momordica charantia OX=3673 GN=LOC111017778 PE=3 SV=1	[more]
A0A6J1JBS4	1.4e-25	77.27	Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1	[more]

BLAST of CcUC10G195180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49780.1	1.1e-08	43.04	phytosulfokine 4 precursor	[more]
AT4G37720.1	3.7e-07	37.80	phytosulfokine 6 precursor	[more]
AT2G22860.1	2.2e-04	37.08	phytosulfokine 2 precursor	[more]
AT5G65870.1	8.5e-04	54.55	phytosulfokine 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 52..86 e-value: 4.2E-10 score: 40.5
IPR009438	Phytosulfokine	PANTHER	PTHR33285	PHYTOSULFOKINES 3	coord: 1..87
None	No IPR available	PANTHER	PTHR33285:SF1	PHYTOSULFOKINES 3	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G195180.1	CcUC10G195180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008083	growth factor activity