CcUC10G194610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G194610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	GTP cyclohydrolase II
Location	CicolChr10: 18420674 .. 18422678 (+)
RNA-Seq Expression	CcUC10G194610
Synteny	CcUC10G194610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGTAATAATAAAAACCACTTTGGTTTCGTATCCATCTGTATAAAATTTGTAGGGCAAATCCTAATAAGAGTTAGCATTAATCAAACTTCTAAACTAATAATTATTTCAATTTAATTGAACTTTTGTAAATGTATTAATTTACATCTTTCTACAGATTTTATTCGACCAATGTTGTGTGAAATGTATACTGTGTGAGTCTTGCTAATTATCAATTTAGATCATTCATTACTCGATTACCTTTGAACATCAATGCATTATGTTAGAAATGCCCTAAACCTAAGTTGTATTCTTATTTATATCATTTAGCACTATTTATAATTTTGGCCCTATAGGGTTTAGAAAAGTGCACTATATTAACTCTTTAACCCTACTGGCGACTTTGACTCTGTAATCTGATACTTCTCTCTAATAATAAACTGCTCTCTCCCTCTATCAGTGGACGTAGCTAACACACTATTAGTGAATCACATATAAGATTTAATGTTGATAGTGAATATTGTTTGCTTTATCTGTTTATTTTTTATTGTCGATTTGTTAACTTATTAATTCTCAAACGTGTGTAGACTTTTTCAAATGTCAGTTTTATGAAATTGATGATTAGAATAAATGCATGAATGATTTTAAAAAAGATACGTGACTAAAGAGTATTCAATTTGAAGTGGGTTAATGATGTGAAGAATAATAAATATTGGGTATGTTGTGAAGGGTAATATTGGTGATGGCAAAGAGATCTTAGTGAGGGTGCACTCAGAATGCTTGACAGGAGACATATTTGGATCAGCAAGATGTGACTGTGGAAAGCAACTAGGTTTGGCAATGCGAAAGATTGAGGAAGGTGGGAAAGGAGTGTTGGTTTATCTTAGGGGCCAAGAAGGAAGAGGCATTGGTTTGGGCAATAAGCTTCTTGCATATAATTTACAAGATGCTGGTAGAGACACTGTTCAAGCAAATCAAGATTTGGGATTGCCTGTTGATTCTAGAGATTATACCCTCGCTGCACAAGTATTTTCTCCTTACCAACTACTCCTTAAACATAATTATTTTCAATCAACTACATTTTAGAGAAATTTACAATTTTTGGTCCTAATTAACCATGTTTAACTTTTACCTTAGATTTTAACAAGGTTTTTGGAGAGCAGATACCAAAACAAATAGTTTAATCCTATGAAGTAAAATGAAACTAAAATGGTTATCAAATAAGGATATAAACTAGCAACATCATGCATTTACTTTTTAAAACAGGAGAAACTCATGTAAAAATATCTTTTTCTGACCATTTATTCTTATTTGTAGTGTTTAAAACTATTCACTACAACAAAATGAACCTTTCATGATATATGAATTGTAGAAAATTTAGAGGGGAGAGAGAAAAGCAATCATAAAAGCCAAATTTAATTTACATGGTTTTTGTGGAAAAATAGGACTTTTTGGATTTATGACTGTTCATTAGTGTCTATGACTTGAATTAAATATCATTAAAGAGCAATGAACTGGAAAACTAGTTATAGTGTTTGCTTAATTAATTTCAAATTAGAAAAATATTAATAACACTTGGTAGTTAAATTTTAATTTTGAATACTAAATTTGTGTGAATTTATTTATAATGAACCAAAGGTAGACTTAGGTTTACGCCTCATTTTGAGATCATGGCTTGCAATAGTAAAAATAAATTGAAAATTTTAGTTGTATCTGTTTTGAATACTTTCTCTTGATGTTATGCACAATAAGTAGGAGTCATATTTTATTGTGATGATATTGATTATTTGTGTATGACTCTACAGATTATAAAGGATCTTGGGGTGAGAACAATGAGGCTAATGACAAATAACCCAGCAAAGTACATGGGGCTAAAGGGGTATGGGTTGGCAATTTCAGGCAGAGTTCCTCTTGTAACCCCAATTACAAAGGAAAATAAAAGATACCTTGAGACTAAGAGAGCCAAAATGGGTCATGACTATGGCTTAGAATTCAATGGTGTGTTAAGTGCTCTAATGAAT

mRNA sequence

ATGGTTAAGGGTAATATTGGTGATGGCAAAGAGATCTTAGTGAGGGTGCACTCAGAATGCTTGACAGGAGACATATTTGGATCAGCAAGATGTGACTGTGGAAAGCAACTAGGTTTGGCAATGCGAAAGATTGAGGAAGGTGGGAAAGGAGTGTTGGTTTATCTTAGGGGCCAAGAAGGAAGAGGCATTGGTTTGGGCAATAAGCTTCTTGCATATAATTTACAAGATGCTGGTAGAGACACTGTTCAAGCAAATCAAGATTTGGGATTGCCTGTTGATTCTAGAGATTATACCCTCGCTGCACAAATTATAAAGGATCTTGGGGTGAGAACAATGAGGCTAATGACAAATAACCCAGCAAAGTACATGGGGCTAAAGGGGTATGGGTTGGCAATTTCAGGCAGAGTTCCTCTTGTAACCCCAATTACAAAGGAAAATAAAAGATACCTTGAGACTAAGAGAGCCAAAATGGGTCATGACTATGGCTTAGAATTCAATGGTGTGTTAAGTGCTCTAATGAAT

Coding sequence (CDS)

ATGGTTAAGGGTAATATTGGTGATGGCAAAGAGATCTTAGTGAGGGTGCACTCAGAATGCTTGACAGGAGACATATTTGGATCAGCAAGATGTGACTGTGGAAAGCAACTAGGTTTGGCAATGCGAAAGATTGAGGAAGGTGGGAAAGGAGTGTTGGTTTATCTTAGGGGCCAAGAAGGAAGAGGCATTGGTTTGGGCAATAAGCTTCTTGCATATAATTTACAAGATGCTGGTAGAGACACTGTTCAAGCAAATCAAGATTTGGGATTGCCTGTTGATTCTAGAGATTATACCCTCGCTGCACAAATTATAAAGGATCTTGGGGTGAGAACAATGAGGCTAATGACAAATAACCCAGCAAAGTACATGGGGCTAAAGGGGTATGGGTTGGCAATTTCAGGCAGAGTTCCTCTTGTAACCCCAATTACAAAGGAAAATAAAAGATACCTTGAGACTAAGAGAGCCAAAATGGGTCATGACTATGGCTTAGAATTCAATGGTGTGTTAAGTGCTCTAATGAAT

Protein sequence

MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEGRGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPAKYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALMN

Homology

[Close]

BLAST of CcUC10G194610 vs. NCBI nr
Match: XP_008462878.1 (PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 345 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 404

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+ANQDLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 405 RGIGLGNKLLAYNLQDAGRDTVEANQDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 464

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 465 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 517

[Close]

BLAST of CcUC10G194610 vs. NCBI nr
Match: XP_008462879.1 (PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 343 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 402

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+ANQDLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 403 RGIGLGNKLLAYNLQDAGRDTVEANQDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 462

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 463 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 515

[Close]

BLAST of CcUC10G194610 vs. NCBI nr
Match: XP_031739798.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 225 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 284

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTVQAN+DLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 285 RGIGLGNKLLAYNLQDAGRDTVQANEDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 344

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 345 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 397

[Close]

BLAST of CcUC10G194610 vs. NCBI nr
Match: KGN53723.1 (hypothetical protein Csa_014894 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 7.0e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 344 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 403

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTVQAN+DLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 404 RGIGLGNKLLAYNLQDAGRDTVQANEDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 463

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 464 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 516

[Close]

BLAST of CcUC10G194610 vs. NCBI nr
Match: XP_038877314.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 154/173 (89.02%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG+EILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVL+YLRGQEG
Sbjct: 224 LVKGDLGDGEEILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLIYLRGQEG 283

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTVQANQDLGLP+DSRDYT+AAQI+KDLGVRT+RLMTNNPA
Sbjct: 284 RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPIDSRDYTVAAQIVKDLGVRTIRLMTNNPA 343

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLK YGL ISGRVPLVTPITK+NKRYLETKRAKMGH YG EFNG LSALM
Sbjct: 344 KYMGLKEYGLDISGRVPLVTPITKDNKRYLETKRAKMGHVYGFEFNGGLSALM 396

[Close]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot
Match: P47924 (Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA1 PE=1 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-75
Identity = 135/167 (80.84%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           MVKG IGDG++ILVRVHSECLTGDIFGSARCDCG QL L+M++IE  G+GVLVYLRG EG
Sbjct: 365 MVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEG 424

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQDAGRDTV+AN++LGLPVDSR+Y + AQII+DLGVRTM+LMTNNPA
Sbjct: 425 RGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPA 484

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNG 168
           KY+GLKGYGLAI GRVPL++ ITKENKRYLETKR KMGH YGL+F G
Sbjct: 485 KYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFKG 531

[Close]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot
Match: Q6Z234 (Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RIBA1 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.0e-73
Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           MVKG++GDG++ILVRVHSECLTGDIFGSARCDCG QL LAM  IE+ G+GV+VYLRG EG
Sbjct: 348 MVKGDVGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMTMIEKTGRGVVVYLRGHEG 407

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQD GRDTV+AN+DLGLPVDSR+Y + AQI++DLGVRTMRLMTNNPA
Sbjct: 408 RGIGLGHKLRAYNLQDDGRDTVEANEDLGLPVDSREYGIGAQILRDLGVRTMRLMTNNPA 467

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSAL 173
           KY GLKGYGL++ GRVPL+TPIT EN+RY+ETKR KMGH YG   +G  S L
Sbjct: 468 KYTGLKGYGLSVLGRVPLLTPITNENRRYMETKRLKMGHVYGTRPSGNTSTL 519

[Close]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot
Match: Q0E079 (Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RIBA2 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 9.8e-73
Identity = 130/163 (79.75%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           MVKG IGDG+ +LVRVHSECLTGDIFGSARCDCG QL +AM  IE+ G+GVLVYLRG EG
Sbjct: 373 MVKGEIGDGQGVLVRVHSECLTGDIFGSARCDCGDQLAMAMEMIEKAGRGVLVYLRGHEG 432

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQD GRDTV+AN+DLGLPVDSR+Y + AQI++DLGVR+M+LMTNNPA
Sbjct: 433 RGIGLGHKLRAYNLQDDGRDTVEANEDLGLPVDSREYGIGAQILRDLGVRSMKLMTNNPA 492

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGL 164
           KY GLKGYGL+I GRVPLVTPIT EN+RYLETKR KMGH YGL
Sbjct: 493 KYGGLKGYGLSIVGRVPLVTPITSENRRYLETKRTKMGHVYGL 535

[Close]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot
Match: Q6L506 (Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RIBA3 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-69
Identity = 123/167 (73.65%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           + KG+IGDG+++LVRVHSECLTGDI GSARCDCG QL LAM+ I++ G+GVLVYLRG EG
Sbjct: 347 VAKGDIGDGEDVLVRVHSECLTGDILGSARCDCGNQLDLAMQLIDKAGRGVLVYLRGHEG 406

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG KL AYNLQD G DTVQAN +LGL VDSR+Y + AQI++D+GVRTMRLMTNNPA
Sbjct: 407 RGIGLGQKLRAYNLQDDGHDTVQANVELGLAVDSREYGIGAQILRDMGVRTMRLMTNNPA 466

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNG 168
           K++GLKGYGLA+ GRVP+++PITKEN+RYLETKR KMGH YG +  G
Sbjct: 467 KFVGLKGYGLAVVGRVPVISPITKENQRYLETKRTKMGHVYGSDLPG 513

[Close]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot
Match: Q9FN89 (Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA3 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-69
Identity = 122/161 (75.78%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKGN+G+G++ILVRVHSECLTGDIFGSARCDCG QL LAM  IE+ G+GV+VYLRG EG
Sbjct: 339 LVKGNVGNGEDILVRVHSECLTGDIFGSARCDCGNQLDLAMELIEKEGRGVVVYLRGHEG 398

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQD G DTVQAN +LGL +DSR+Y + AQ+++D+GVRTMRLMTNNPA
Sbjct: 399 RGIGLGHKLRAYNLQDEGHDTVQANVELGLSIDSREYGIGAQMLRDIGVRTMRLMTNNPA 458

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDY 162
           K+ GLKGYGLA+ GRVP+VTPITKEN+RY+ETKR KMGH Y
Sbjct: 459 KFTGLKGYGLAVVGRVPVVTPITKENRRYMETKRKKMGHIY 499

[Close]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL
Match: A0A0A0KVX4 (GTP cyclohydrolase II OS=Cucumis sativus OX=3659 GN=Csa_4G111580 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 344 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 403

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTVQAN+DLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 404 RGIGLGNKLLAYNLQDAGRDTVQANEDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 463

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 464 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 516

[Close]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL
Match: A0A1S3CJI1 (GTP cyclohydrolase II OS=Cucumis melo OX=3656 GN=LOC103501158 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 343 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 402

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+ANQDLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 403 RGIGLGNKLLAYNLQDAGRDTVEANQDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 462

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 463 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 515

[Close]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL
Match: A0A1S3CIF1 (GTP cyclohydrolase II OS=Cucumis melo OX=3656 GN=LOC103501158 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 153/173 (88.44%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 345 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 404

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+ANQDLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 405 RGIGLGNKLLAYNLQDAGRDTVEANQDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 464

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALM 174
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFNG LSAL+
Sbjct: 465 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFNGGLSALI 517

[Close]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL
Match: A0A5D3E2U7 (GTP cyclohydrolase II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00060 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.2e-82
Identity = 148/166 (89.16%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKG++GDG++ILVRVHSECLTGDIFGS RCDCGKQLGLAM+ IEE GKGVLVY+RGQEG
Sbjct: 294 LVKGDLGDGEDILVRVHSECLTGDIFGSGRCDCGKQLGLAMQHIEEAGKGVLVYVRGQEG 353

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+ANQDLGLP+DSRDYT+AAQI+KD+GVRTMRLMTNNPA
Sbjct: 354 RGIGLGNKLLAYNLQDAGRDTVEANQDLGLPIDSRDYTVAAQIVKDVGVRTMRLMTNNPA 413

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFN 167
           KYMGLKGYGL ISGRVPLVTPITK+NKRYLETKRAKMGH YGLEFN
Sbjct: 414 KYMGLKGYGLGISGRVPLVTPITKDNKRYLETKRAKMGHVYGLEFN 459

[Close]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL
Match: A0A6J1FNW0 (GTP cyclohydrolase II OS=Cucurbita moschata OX=3662 GN=LOC111446902 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.5e-79
Identity = 142/174 (81.61%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           M KG++ DG+++LVRVHSEC TGDIFGSARCDCGKQL LAM+ IE  GKGVLVYLRGQEG
Sbjct: 341 MAKGDLSDGEDVLVRVHSECFTGDIFGSARCDCGKQLALAMQHIEAAGKGVLVYLRGQEG 400

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLGNKLLAYNLQDAGRDTV+AN+DLGLP+DSRDY++ AQI++DLGVRTMRLMTNNPA
Sbjct: 401 RGIGLGNKLLAYNLQDAGRDTVEANEDLGLPIDSRDYSVGAQILRDLGVRTMRLMTNNPA 460

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNGVLSALMN 175
           KY+GLKGYGL +S RVPLVTPITK+NK+YLETKRAKMGH YGLEFNG L  LM+
Sbjct: 461 KYVGLKGYGLTVSSRVPLVTPITKDNKKYLETKRAKMGHVYGLEFNGGLRTLMD 514

[Close]

BLAST of CcUC10G194610 vs. TAIR 10
Match: AT5G64300.1 (GTP cyclohydrolase II )

HSP 1 Score: 282.7 bits (722), Expect = 2.0e-76
Identity = 135/167 (80.84%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           MVKG IGDG++ILVRVHSECLTGDIFGSARCDCG QL L+M++IE  G+GVLVYLRG EG
Sbjct: 365 MVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALSMQQIEATGRGVLVYLRGHEG 424

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQDAGRDTV+AN++LGLPVDSR+Y + AQII+DLGVRTM+LMTNNPA
Sbjct: 425 RGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPA 484

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDYGLEFNG 168
           KY+GLKGYGLAI GRVPL++ ITKENKRYLETKR KMGH YGL+F G
Sbjct: 485 KYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFKG 531

[Close]

BLAST of CcUC10G194610 vs. TAIR 10
Match: AT5G59750.1 (DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 122/161 (75.78%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKGN+G+G++ILVRVHSECLTGDIFGSARCDCG QL LAM  IE+ G+GV+VYLRG EG
Sbjct: 339 LVKGNVGNGEDILVRVHSECLTGDIFGSARCDCGNQLDLAMELIEKEGRGVVVYLRGHEG 398

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQD G DTVQAN +LGL +DSR+Y + AQ+++D+GVRTMRLMTNNPA
Sbjct: 399 RGIGLGHKLRAYNLQDEGHDTVQANVELGLSIDSREYGIGAQMLRDIGVRTMRLMTNNPA 458

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDY 162
           K+ GLKGYGLA+ GRVP+VTPITKEN+RY+ETKR KMGH Y
Sbjct: 459 KFTGLKGYGLAVVGRVPVVTPITKENRRYMETKRKKMGHIY 499

[Close]

BLAST of CcUC10G194610 vs. TAIR 10
Match: AT5G59750.2 (DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 122/161 (75.78%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           +VKGN+G+G++ILVRVHSECLTGDIFGSARCDCG QL LAM  IE+ G+GV+VYLRG EG
Sbjct: 373 LVKGNVGNGEDILVRVHSECLTGDIFGSARCDCGNQLDLAMELIEKEGRGVVVYLRGHEG 432

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           RGIGLG+KL AYNLQD G DTVQAN +LGL +DSR+Y + AQ+++D+GVRTMRLMTNNPA
Sbjct: 433 RGIGLGHKLRAYNLQDEGHDTVQANVELGLSIDSREYGIGAQMLRDIGVRTMRLMTNNPA 492

Query: 121 KYMGLKGYGLAISGRVPLVTPITKENKRYLETKRAKMGHDY 162
           K+ GLKGYGLA+ GRVP+VTPITKEN+RY+ETKR KMGH Y
Sbjct: 493 KFTGLKGYGLAVVGRVPVVTPITKENRRYMETKRKKMGHIY 533

[Close]

BLAST of CcUC10G194610 vs. TAIR 10
Match: AT2G22450.1 (riboflavin biosynthesis protein, putative )

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 82/140 (58.57%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MVKGNIGDGKEILVRVHSECLTGDIFGSARCDCGKQLGLAMRKIEEGGKGVLVYLRGQEG 60
           MVKG IGDGK+ILVRVH+EC+T DIFG++    GKQL +AMR IEE G+GV VYLRG E 
Sbjct: 343 MVKGEIGDGKDILVRVHAECITDDIFGNS--SGGKQLAIAMRLIEENGRGVFVYLRGPES 402

Query: 61  RGIGLGNKLLAYNLQDAGRDTVQANQDLGLPVDSRDYTLAAQIIKDLGVRTMRLMTNNPA 120
           +GI L +K   YN            + +  PV SR+Y + AQI++DLGVR M++MTNNPA
Sbjct: 403 KGIDLSHKPRTYNTNS------DQAEGVSFPVASREYGIGAQILRDLGVREMKVMTNNPA 462

Query: 121 KYMGLKGYGLAISGRVPLVT 141
            Y+GLKGYGL+ISG+VPL+T
Sbjct: 463 HYVGLKGYGLSISGKVPLIT 474

The following BLAST results are available for this feature:

BLAST of CcUC10G194610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462878.1	7.0e-84	88.44	PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-li...	[more]
XP_008462879.1	7.0e-84	88.44	PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-li...	[more]
XP_031739798.1	7.0e-84	88.44	bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucumis sati...	[more]
KGN53723.1	7.0e-84	88.44	hypothetical protein Csa_014894 [Cucumis sativus]	[more]
XP_038877314.1	1.6e-83	89.02	bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Beninca...	[more]

BLAST of CcUC10G194610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P47924	2.8e-75	80.84	Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Arabidopsi...	[more]
Q6Z234	2.0e-73	76.16	Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=O...	[more]
Q0E079	9.8e-73	79.75	Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=O...	[more]
Q6L506	1.3e-69	73.65	Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS...	[more]
Q9FN89	3.0e-69	75.78	Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic OS=Arabidop...	[more]

BLAST of CcUC10G194610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX4	3.4e-84	88.44	GTP cyclohydrolase II OS=Cucumis sativus OX=3659 GN=Csa_4G111580 PE=3 SV=1	[more]
A0A1S3CJI1	3.4e-84	88.44	GTP cyclohydrolase II OS=Cucumis melo OX=3656 GN=LOC103501158 PE=3 SV=1	[more]
A0A1S3CIF1	3.4e-84	88.44	GTP cyclohydrolase II OS=Cucumis melo OX=3656 GN=LOC103501158 PE=3 SV=1	[more]
A0A5D3E2U7	9.2e-82	89.16	GTP cyclohydrolase II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65...	[more]
A0A6J1FNW0	9.5e-79	81.61	GTP cyclohydrolase II OS=Cucurbita moschata OX=3662 GN=LOC111446902 PE=3 SV=1	[more]

BLAST of CcUC10G194610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64300.1	2.0e-76	80.84	GTP cyclohydrolase II	[more]
AT5G59750.1	2.1e-70	75.78	DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II	[more]
AT5G59750.2	2.1e-70	75.78	DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II	[more]
AT2G22450.1	2.3e-40	58.57	riboflavin biosynthesis protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036144	GTP cyclohydrolase II superfamily	GENE3D	3.40.50.10990	GTP cyclohydrolase II	coord: 1..140 e-value: 3.4E-64 score: 217.3
IPR036144	GTP cyclohydrolase II superfamily	SUPERFAMILY	142695	RibA-like	coord: 1..139
IPR000926	GTP cyclohydrolase II, RibA	TIGRFAM	TIGR00505	TIGR00505	coord: 2..159 e-value: 1.0E-65 score: 218.8
IPR000926	GTP cyclohydrolase II, RibA	CDD	cd00641	GTP_cyclohydro2	coord: 1..160 e-value: 3.67906E-96 score: 274.762
IPR032677	GTP cyclohydrolase II	PFAM	PF00925	GTP_cyclohydro2	coord: 1..137 e-value: 1.6E-59 score: 200.2
None	No IPR available	PANTHER	PTHR21327	GTP CYCLOHYDROLASE II-RELATED	coord: 1..170
None	No IPR available	PANTHER	PTHR21327:SF29	MONOFUNCTIONAL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA 3, CHLOROPLASTIC	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G194610.1	CcUC10G194610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009231	riboflavin biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003935	GTP cyclohydrolase II activity
molecular_function	GO:0046872	metal ion binding