CcUC10G193980 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G193980
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein CURVATURE THYLAKOID 1D, chloroplastic-like
Location	CicolChr10: 16459266 .. 16461827 (-)
RNA-Seq Expression	CcUC10G193980
Synteny	CcUC10G193980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATATATGGTTCTCATCTTTCCGTTGAACCCTTAATCTTTAACCCTTAACCCTACCCTGTGGCCTCTTCTTCCAATGTATAAGAAACACTCATTTCACCACCGCCATCGCCATCGCCATTTCCTCTTCCATTTCAATCACTGCTTCACCCATTCCCTTCTCCCGCCATGGCCATGGACCTCTCTGCCTCCTCACCCCTTTTCTCTACTCTTCTCGCCGGAAACCACCACCTCCGTTCCACCCCCACTCTTCCTCTCAGAATCGCCATTCAATCCCGCTCTACGCGCTCTCTCCATTCCCGTATGTTGTCCATTCCCTACGATTTGAATTTCTGTGGTGTTCCTTTGGGTTTTTTTTTATTTTTATTTATTTATTTATTTATTTTTTATGTGAGATCACTTTATGCTTTTCTTGCACTTTTCTTTATTGTTTCTTCTAGTATAACGATGAACTCATTAGCAATTCCTTGGATGTTGGAGAAAAATTGAAGGGAGGGGGGGGGGGGGCATGTTCATGATTTTGAAGATTTGTTGTTTTTTGTTCTAAATTCTTTCCCTAGGGCATCGTCATTCTGCTGTTTCATTGCCAAGAGCAGCAGCCTCGGATGATTCAAATGGATCTAGACCATTCTTTACTGAAGAGCGGGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCAGTCCCACTGGAAGATTCTTCTGCTGTGGAGCTTCCATCCGACAAAATTGCGACAACAGAGGTACCTAAAGAAGAACCAGTTGAAGATGCGCCGGTGGTAACTCCTGAGGATTTTCCTTCTGCATCTTCAGCCACCTTGGCGGATTCTTCTTCTGGTGGGAAGGTCGAAACTGTGGCATCTGAAGAACCTAAAGAACAACCAGTTGAGGGTGCACAAGAACAGGCGTTTGAATCATGGAATGATCTTAAAGTAAGAATTTCTATTGAAGTTATGTGGATTATGATTTATAATGAACTTTTGCAAGTTAAATGTGTTAAATCCAAAAGTACAATATAATGCCTTGTCCTTTTTTATTTTTAATTCCAACAAGAGAATGATTTATTTCAAAGCTGACTTGATTTTTGCTTCAGTTGGTTATTTGTTTATTTATTTTGCTAGATTGCACTGTTCAATGCCTTCCTTGGTGTCTTTGACAATTTTTTTTAAAAAATCTTAATTGTTGAGTAACTGGAGGTATCTTCTATTAAAGCTTTTTTGGGGGCATTTGTCCTTTTTTTTAATAAAAATATTTGGGTTTTTTCTTTTGGTTCCCATGTGTTTTCCTTTGTTTTTTTTCCCCTCGTATTACTTTTCCAAAGTTAGTTGCAGTGATGATATCATCGAACTTGATAGTATATACCAATGCTACATGAAACGTCGACAACTATGTCGACCTGAGCGGTTAATCGAGCAACCTAACTTCTTGAATTGATTTTTAATTGTTGTATTTCTGTCTTCAATTTTTTTTCTCTTCTTAAAATTTGTTTTATTGTCTTTCTGGTTTGCATTCATTGTGTCTTAAACATGCTGATGTTCTGATAGGTTTACATGGCACTTGCCTCTAGGGAACACGTTTTTCACATAATGTCTTGTTTTCCATTCTGTCTTTGATCATAGGAAACATTTTCAAACTTGATCTTAGGATTAAAAACTGCCAACTTTGGTGTTGGTTGCCCCCTTTCAAGTATGGTGTTGATTATGAAAAGATAATTTCAAAAGGGATATGACATCTCCTACCAAAATTTGAATTTACATAGCTTTGTCAATTTGGAAACACCATTTTCATTTAGCAGAAGTTGTATTTTGGGATTGCAATAGCTTCATCCTATGAATGGTTTGATGATTACTTGTGGTTGCAGCTTGAGTCTGTGGACACATACAGTCTTGTCCTATATGGTGGTGGTGCTTTCTTTGGCATTTGGTTGGTTTCCGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTAAAGTTTGCTTAGAACTGCAAAAGTAATATTTAAGGGGGTTCAGTTGGTTAAGTGTTTTTGAGATGAATTAATAACCATGGATTCATTGTTGCAAATATAGGTACCAAAGTTGTTGGAAGTTGTGGGGCTTGGTTACAGTGTGTGGTTCACTGCTCGCTATTTGTTATTCAAGGTAATTGCTTGAAGTGGTTTGATTTTTGAAGGACTGTACTTTTTCGCCAAATATGTGATAAACTGAGATAATTTATTTTGTTGCGACATTTCAGGAAAGTAGAGATGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTCCTTGGTTCAGATTGACGACCGATGCCATACTTAGGTAGTTAGTTTATGTTTGGCTAGATAAGATAGTAGCTGGATTTGCTGATGAACATATATGTGATATAGATGATGATTACATTTTGTTTCTGATGGAAAAAAAAGCAAGTATTACATTGATTGAATATTGTTTTAGATATAAATGCTTTAGGTATTTTGTTTTTGTTTCTTCGAAAATTATGAAAAGTATCCCTGTTGAATTGGTTTTTTTAATTAGTAATGTTTATTTAAAACTTATC

mRNA sequence

CTATATATGGTTCTCATCTTTCCGTTGAACCCTTAATCTTTAACCCTTAACCCTACCCTGTGGCCTCTTCTTCCAATGTATAAGAAACACTCATTTCACCACCGCCATCGCCATCGCCATTTCCTCTTCCATTTCAATCACTGCTTCACCCATTCCCTTCTCCCGCCATGGCCATGGACCTCTCTGCCTCCTCACCCCTTTTCTCTACTCTTCTCGCCGGAAACCACCACCTCCGTTCCACCCCCACTCTTCCTCTCAGAATCGCCATTCAATCCCGCTCTACGCGCTCTCTCCATTCCCGGCATCGTCATTCTGCTGTTTCATTGCCAAGAGCAGCAGCCTCGGATGATTCAAATGGATCTAGACCATTCTTTACTGAAGAGCGGGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCAGTCCCACTGGAAGATTCTTCTGCTGTGGAGCTTCCATCCGACAAAATTGCGACAACAGAGGTACCTAAAGAAGAACCAGTTGAAGATGCGCCGGTGGTAACTCCTGAGGATTTTCCTTCTGCATCTTCAGCCACCTTGGCGGATTCTTCTTCTGGTGGGAAGGTCGAAACTGTGGCATCTGAAGAACCTAAAGAACAACCAGTTGAGGGTGCACAAGAACAGGCGTTTGAATCATGGAATGATCTTAAACTTGAGTCTGTGGACACATACAGTCTTGTCCTATATGGTGGTGGTGCTTTCTTTGGCATTTGGTTGGTTTCCGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTACCAAAGTTGTTGGAAGTTGTGGGGCTTGGTTACAGTGTGTGGTTCACTGCTCGCTATTTGTTATTCAAGGAAAGTAGAGATGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTCCTTGGTTCAGATTGACGACCGATGCCATACTTAGGTAGTTAGTTTATGTTTGGCTAGATAAGATAGTAGCTGGATTTGCTGATGAACATATATGTGATATAGATGATGATTACATTTTGTTTCTGATGGAAAAAAAAGCAAGTATTACATTGATTGAATATTGTTTTAGATATAAATGCTTTAGGTATTTTGTTTTTGTTTCTTCGAAAATTATGAAAAGTATCCCTGTTGAATTGGTTTTTTTAATTAGTAATGTTTATTTAAAACTTATC

Coding sequence (CDS)

ATGGCCATGGACCTCTCTGCCTCCTCACCCCTTTTCTCTACTCTTCTCGCCGGAAACCACCACCTCCGTTCCACCCCCACTCTTCCTCTCAGAATCGCCATTCAATCCCGCTCTACGCGCTCTCTCCATTCCCGGCATCGTCATTCTGCTGTTTCATTGCCAAGAGCAGCAGCCTCGGATGATTCAAATGGATCTAGACCATTCTTTACTGAAGAGCGGGATAGTGTGACAGTCTTGGAAGATTCTCCTTCTGCTTCTTCAGTCCCACTGGAAGATTCTTCTGCTGTGGAGCTTCCATCCGACAAAATTGCGACAACAGAGGTACCTAAAGAAGAACCAGTTGAAGATGCGCCGGTGGTAACTCCTGAGGATTTTCCTTCTGCATCTTCAGCCACCTTGGCGGATTCTTCTTCTGGTGGGAAGGTCGAAACTGTGGCATCTGAAGAACCTAAAGAACAACCAGTTGAGGGTGCACAAGAACAGGCGTTTGAATCATGGAATGATCTTAAACTTGAGTCTGTGGACACATACAGTCTTGTCCTATATGGTGGTGGTGCTTTCTTTGGCATTTGGTTGGTTTCCGCCGTTGTTGGTGCTGTTGATTCCATCCCATTGGTACCAAAGTTGTTGGAAGTTGTGGGGCTTGGTTACAGTGTGTGGTTCACTGCTCGCTATTTGTTATTCAAGGAAAGTAGAGATGAATTGGCTGCCAAGATTGATGAGGTAAAGGAGCAGGTCCTTGGTTCAGATTGA

Protein sequence

MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASDDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD

Homology

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BLAST of CcUC10G193980 vs. NCBI nr
Match: XP_011653358.1 (protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN53657.1 hypothetical protein Csa_014678 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 9.7e-95
Identity = 198/250 (79.20%), Postives = 211/250 (84.40%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASD 60
           MA+DLSAS PLFSTLL GN +LR  P LPLRIAI S  T SLHSRHRH AVSLPRAAASD
Sbjct: 1   MAIDLSASPPLFSTLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPRAAASD 60

Query: 61  DSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVV 120
           +SNGS  FFTE+RDSVTVLEDSPSASS+ LEDS   E+PSD +A TEVPK+EPVED PV+
Sbjct: 61  ESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSDVLAATEVPKQEPVEDVPVI 120

Query: 121 TPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLV 180
                      TL DSSS GKVE V SEEPKEQP+EGAQEQAFE  NDLKLESVDTYSL 
Sbjct: 121 -----------TLDDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLA 180

Query: 181 LYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKID 240
           LYG GAFFGIWLVSA+VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+ID
Sbjct: 181 LYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARID 239

Query: 241 EVKEQVLGSD 251
           E+KEQVLGSD
Sbjct: 241 ELKEQVLGSD 239

[Close]

BLAST of CcUC10G193980 vs. NCBI nr
Match: XP_038903367.1 (protein CURVATURE THYLAKOID 1D, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-90
Identity = 200/251 (79.68%), Postives = 206/251 (82.07%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAI-QSRSTRSLHSRHRHSAVSLPRAAAS 60
           MAMDLS SS LFS+LLAGN HLR    LPLRIAI  S STR+LHS HRH AVSLPRAAAS
Sbjct: 1   MAMDLSPSSALFSSLLAGNPHLRPIRPLPLRIAIPTSSSTRTLHSWHRHFAVSLPRAAAS 60

Query: 61  DDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPV 120
           DDSNGS  FFTEERDSVTVLEDSPS SSV LEDS A +LPS      EVPKEEPVED PV
Sbjct: 61  DDSNGSSSFFTEERDSVTVLEDSPSVSSVALEDSPAEKLPS------EVPKEEPVEDVPV 120

Query: 121 VTPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSL 180
           V           TL DSS  GKVETVASEEPKE+ VEGAQEQ FE  ND KLESVDTYSL
Sbjct: 121 V-----------TLEDSSPAGKVETVASEEPKEEAVEGAQEQGFELLNDFKLESVDTYSL 180

Query: 181 VLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKI 240
           +LYG GAFFGIWLVSAV+GAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKI
Sbjct: 181 ILYGAGAFFGIWLVSAVIGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKI 234

Query: 241 DEVKEQVLGSD 251
           DEVKEQVLGSD
Sbjct: 241 DEVKEQVLGSD 234

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BLAST of CcUC10G193980 vs. NCBI nr
Match: XP_008455610.1 (PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis melo] >KAA0045383.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa] >TYJ96953.1 protein CURVATURE THYLAKOID 1D [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.5e-87
Identity = 189/250 (75.60%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASD 60
           MA+DLSAS PLFSTLL G  HLR  P LPLRIAI S  T SLHSRHRH AVSLPRAAASD
Sbjct: 1   MAIDLSASPPLFSTLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPRAAASD 60

Query: 61  DSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVV 120
           +S+   PFFTE+RDSVTVLEDSPSASS+ LEDS   E+PSD IA TEVPK+EPVED PVV
Sbjct: 61  ESS---PFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSDGIAATEVPKQEPVEDVPVV 120

Query: 121 TPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLV 180
           T                    VE   SEEPKEQP+EGAQEQAFE  NDLKLESVDTYSL 
Sbjct: 121 T-------------------LVEIATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLA 180

Query: 181 LYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKID 240
           LYG GAFFGIWLVSA+VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+ID
Sbjct: 181 LYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARID 228

Query: 241 EVKEQVLGSD 251
           E+KEQV GSD
Sbjct: 241 ELKEQVFGSD 228

[Close]

BLAST of CcUC10G193980 vs. NCBI nr
Match: XP_022990797.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 282.7 bits (722), Expect = 3.0e-72
Identity = 171/271 (63.10%), Postives = 193/271 (71.22%), Query Frame = 0


Query: 1   MAMDLSASSPL-----FSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPR 60
           MAM+L A  P+      S LLA N  LR    LPL++ I SR TR +H R+RH +VSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDS-----------SAVELPSDKIA 120
           AAASDDS GS P+ TEERDS  V EDS  ASSV +EDS            +  L SD+I 
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIV 120

Query: 121 TTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKV-------ETVASEEPKEQPVEG 180
           T EVPKEEPVEDAPVV  ED  SASSA++ DSSS   V       +    EEPKE+PVE 
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEV 180

Query: 181 AQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGY 240
           AQE   +S NDLKLESVD YSL LYGGGAFFG+WLVS VVGA DSIPLVPKLLE+VGLGY
Sbjct: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGY 240

Query: 241 SVWFTARYLLFKESRDELAAKIDEVKEQVLG 249
           +VWF AR+LLFKESRDELAAKIDE+KEQV+G
Sbjct: 241 TVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CcUC10G193980 vs. NCBI nr
Match: XP_022136669.1 (protein CURVATURE THYLAKOID 1B, chloroplastic-like [Momordica charantia])

HSP 1 Score: 282.0 bits (720), Expect = 5.2e-72
Identity = 172/256 (67.19%), Postives = 190/256 (74.22%), Query Frame = 0


Query: 1   MAMDLSASSPL-----FSTLLAGNHHLRSTPTLPLRIAIQSRSTRS-LHSRHRHSAVSLP 60
           MAM+L AS P+     FSTLLAGN  LR    LP+++ + SR+TR+ LH R+R  A+SLP
Sbjct: 1   MAMELCASQPISHLPVFSTLLAGNPQLRPKHALPIKMTLPSRTTRTLLHFRYRDYAISLP 60

Query: 61  RAAASDDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPV 120
           RAAASDDSNG  P  TEERDSVT LEDSPSASSV LEDS A EL S +IA +EVPKEEPV
Sbjct: 61  RAAASDDSNGYSPLITEERDSVTTLEDSPSASSVALEDSPAEELASSEIAASEVPKEEPV 120

Query: 121 EDAPVVTPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESV 180
           E APVVT ED PSA            K E   SEEPKE+PV G           L+LES 
Sbjct: 121 EVAPVVTLEDSPSAE-----------KNEIATSEEPKEEPVVGLLY--------LQLESG 180

Query: 181 DTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDE 240
           DTYSLVLYG GAF GIWLVSA+VGAVDSIPL+PKLLEVVGLGY+VWFTAR+LLFKESRDE
Sbjct: 181 DTYSLVLYGAGAFVGIWLVSAIVGAVDSIPLIPKLLEVVGLGYTVWFTARFLLFKESRDE 237

Query: 241 LAAKIDEVKEQVLGSD 251
           LAAKI EVKEQVLG D
Sbjct: 241 LAAKIGEVKEQVLGLD 237

[Close]

BLAST of CcUC10G193980 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 145 VASEEP---KEQP-VEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAV 204
           VA+EE     E P  E  + QA E  ND+KL+S  TYS++LYG GA   ++L SA+V ++
Sbjct: 82  VAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSL 141

Query: 205 DSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD 251
           ++IPL PKL+EVVGLGY++WFT RYLLFK +R+EL  K+ E+K+QVLGSD
Sbjct: 142 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of CcUC10G193980 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.4e-17
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 0


Query: 85  ASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVET 144
           A SV    S AV +P     +T           P + P  F  +S        SG  ++ 
Sbjct: 2   AISVAASSSMAVMVPRVPAVSTR------CSAVPYLPPRSFGRSSFTVPLKLVSGNGLQK 61

Query: 145 V-------ASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVV 204
           V       +SEE              E W+ L+ +S    ++++YGGGA   +WL S VV
Sbjct: 62  VELLKTRASSEETSSIDTNELITDLKEKWDGLENKS----TVLIYGGGAIVAVWLSSIVV 121

Query: 205 GAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD 251
           GA++S+PL+PK++E+VGLGY+ WF  RYLLFK SR ELA  I+ +K+++ GS+
Sbjct: 122 GAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of CcUC10G193980 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 85  ASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVET 144
           +SS  + DS A   P  ++A+        +   P +  +    A+ AT         V T
Sbjct: 7   SSSSTIIDSRA---PPSRLASASASSPSCI-SLPTLPIQSHTRAAKATAYCRKIVRNVVT 66

Query: 145 VASEEPKEQPVEGAQEQ----------AFESWNDLKLESVDTYSLVLYGGGAFFGIWLVS 204
            A+ E  E P    + +          A E+W  +     D Y++          +W  +
Sbjct: 67  RATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVD----DKYAIGSLAFAGVVALWGSA 126

Query: 205 AVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGS 250
            ++ A+D +PLVP +LE+VG+GY+ WFT + L+FK  R+ L  K+    + +LGS
Sbjct: 127 GMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL
Match: A0A0A0KZ51 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.7e-95
Identity = 198/250 (79.20%), Postives = 211/250 (84.40%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASD 60
           MA+DLSAS PLFSTLL GN +LR  P LPLRIAI S  T SLHSRHRH AVSLPRAAASD
Sbjct: 1   MAIDLSASPPLFSTLLTGNPYLRPRPALPLRIAISSAFTTSLHSRHRHFAVSLPRAAASD 60

Query: 61  DSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVV 120
           +SNGS  FFTE+RDSVTVLEDSPSASS+ LEDS   E+PSD +A TEVPK+EPVED PV+
Sbjct: 61  ESNGSSSFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSDVLAATEVPKQEPVEDVPVI 120

Query: 121 TPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLV 180
                      TL DSSS GKVE V SEEPKEQP+EGAQEQAFE  NDLKLESVDTYSL 
Sbjct: 121 -----------TLDDSSSAGKVEMVTSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLA 180

Query: 181 LYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKID 240
           LYG GAFFGIWLVSA+VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+ID
Sbjct: 181 LYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARID 239

Query: 241 EVKEQVLGSD 251
           E+KEQVLGSD
Sbjct: 241 ELKEQVLGSD 239

[Close]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL
Match: A0A5D3BCB5 (Protein CURVATURE THYLAKOID 1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00660 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.3e-88
Identity = 189/250 (75.60%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASD 60
           MA+DLSAS PLFSTLL G  HLR  P LPLRIAI S  T SLHSRHRH AVSLPRAAASD
Sbjct: 1   MAIDLSASPPLFSTLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPRAAASD 60

Query: 61  DSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVV 120
           +S+   PFFTE+RDSVTVLEDSPSASS+ LEDS   E+PSD IA TEVPK+EPVED PVV
Sbjct: 61  ESS---PFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSDGIAATEVPKQEPVEDVPVV 120

Query: 121 TPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLV 180
           T                    VE   SEEPKEQP+EGAQEQAFE  NDLKLESVDTYSL 
Sbjct: 121 T-------------------LVEIATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLA 180

Query: 181 LYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKID 240
           LYG GAFFGIWLVSA+VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+ID
Sbjct: 181 LYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARID 228

Query: 241 EVKEQVLGSD 251
           E+KEQV GSD
Sbjct: 241 ELKEQVFGSD 228

[Close]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL
Match: A0A1S3C1G0 (protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495742 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.3e-88
Identity = 189/250 (75.60%), Postives = 200/250 (80.00%), Query Frame = 0


Query: 1   MAMDLSASSPLFSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPRAAASD 60
           MA+DLSAS PLFSTLL G  HLR  P LPLRIAI S  T SLHSRHRH AVSLPRAAASD
Sbjct: 1   MAIDLSASPPLFSTLLTGKPHLRPRPALPLRIAISSACTTSLHSRHRHFAVSLPRAAASD 60

Query: 61  DSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVV 120
           +S+   PFFTE+RDSVTVLEDSPSASS+ LEDS   E+PSD IA TEVPK+EPVED PVV
Sbjct: 61  ESS---PFFTEQRDSVTVLEDSPSASSLTLEDSPPEEIPSDGIAATEVPKQEPVEDVPVV 120

Query: 121 TPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLV 180
           T                    VE   SEEPKEQP+EGAQEQAFE  NDLKLESVDTYSL 
Sbjct: 121 T-------------------LVEIATSEEPKEQPLEGAQEQAFEFLNDLKLESVDTYSLA 180

Query: 181 LYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKID 240
           LYG GAFFGIWLVSA+VGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAA+ID
Sbjct: 181 LYGAGAFFGIWLVSAIVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAARID 228

Query: 241 EVKEQVLGSD 251
           E+KEQV GSD
Sbjct: 241 ELKEQVFGSD 228

[Close]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL
Match: A0A6J1JJV3 (protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487564 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.5e-72
Identity = 171/271 (63.10%), Postives = 193/271 (71.22%), Query Frame = 0


Query: 1   MAMDLSASSPL-----FSTLLAGNHHLRSTPTLPLRIAIQSRSTRSLHSRHRHSAVSLPR 60
           MAM+L A  P+      S LLA N  LR    LPL++ I SR TR +H R+RH +VSLPR
Sbjct: 1   MAMELCACRPISDLPVSSPLLARNQLLRPKHALPLKMPIASRLTRGIHFRYRHFSVSLPR 60

Query: 61  AAASDDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDS-----------SAVELPSDKIA 120
           AAASDDS GS P+ TEERDS  V EDS  ASSV +EDS            +  L SD+I 
Sbjct: 61  AAASDDSYGSSPYITEERDSAAVSEDSSPASSVAVEDSPPASSVAEENLPSENLSSDEIV 120

Query: 121 TTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKV-------ETVASEEPKEQPVEG 180
           T EVPKEEPVEDAPVV  ED  SASSA++ DSSS   V       +    EEPKE+PVE 
Sbjct: 121 TPEVPKEEPVEDAPVVAVEDSLSASSASVGDSSSAENVAYNETSTDEEPKEEPKEKPVEV 180

Query: 181 AQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGY 240
           AQE   +S NDLKLESVD YSL LYGGGAFFG+WLVS VVGA DSIPLVPKLLE+VGLGY
Sbjct: 181 AQEWTLDSLNDLKLESVDKYSLALYGGGAFFGLWLVSTVVGAFDSIPLVPKLLEIVGLGY 240

Query: 241 SVWFTARYLLFKESRDELAAKIDEVKEQVLG 249
           +VWF AR+LLFKESRDELAAKIDE+KEQV+G
Sbjct: 241 TVWFAARFLLFKESRDELAAKIDEIKEQVIG 271

[Close]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL
Match: A0A6J1C4Z6 (protein CURVATURE THYLAKOID 1B, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111008322 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.5e-72
Identity = 172/256 (67.19%), Postives = 190/256 (74.22%), Query Frame = 0


Query: 1   MAMDLSASSPL-----FSTLLAGNHHLRSTPTLPLRIAIQSRSTRS-LHSRHRHSAVSLP 60
           MAM+L AS P+     FSTLLAGN  LR    LP+++ + SR+TR+ LH R+R  A+SLP
Sbjct: 1   MAMELCASQPISHLPVFSTLLAGNPQLRPKHALPIKMTLPSRTTRTLLHFRYRDYAISLP 60

Query: 61  RAAASDDSNGSRPFFTEERDSVTVLEDSPSASSVPLEDSSAVELPSDKIATTEVPKEEPV 120
           RAAASDDSNG  P  TEERDSVT LEDSPSASSV LEDS A EL S +IA +EVPKEEPV
Sbjct: 61  RAAASDDSNGYSPLITEERDSVTTLEDSPSASSVALEDSPAEELASSEIAASEVPKEEPV 120

Query: 121 EDAPVVTPEDFPSASSATLADSSSGGKVETVASEEPKEQPVEGAQEQAFESWNDLKLESV 180
           E APVVT ED PSA            K E   SEEPKE+PV G           L+LES 
Sbjct: 121 EVAPVVTLEDSPSAE-----------KNEIATSEEPKEEPVVGLLY--------LQLESG 180

Query: 181 DTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDE 240
           DTYSLVLYG GAF GIWLVSA+VGAVDSIPL+PKLLEVVGLGY+VWFTAR+LLFKESRDE
Sbjct: 181 DTYSLVLYGAGAFVGIWLVSAIVGAVDSIPLIPKLLEVVGLGYTVWFTARFLLFKESRDE 237

Query: 241 LAAKIDEVKEQVLGSD 251
           LAAKI EVKEQVLG D
Sbjct: 241 LAAKIGEVKEQVLGLD 237

[Close]

BLAST of CcUC10G193980 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 145 VASEEP---KEQP-VEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAV 204
           VA+EE     E P  E  + QA E  ND+KL+S  TYS++LYG GA   ++L SA+V ++
Sbjct: 82  VAAEEKNSNSEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSL 141

Query: 205 DSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD 251
           ++IPL PKL+EVVGLGY++WFT RYLLFK +R+EL  K+ E+K+QVLGSD
Sbjct: 142 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of CcUC10G193980 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-18
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 0


Query: 85  ASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVET 144
           A SV    S AV +P     +T           P + P  F  +S        SG  ++ 
Sbjct: 2   AISVAASSSMAVMVPRVPAVSTR------CSAVPYLPPRSFGRSSFTVPLKLVSGNGLQK 61

Query: 145 V-------ASEEPKEQPVEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVV 204
           V       +SEE              E W+ L+ +S    ++++YGGGA   +WL S VV
Sbjct: 62  VELLKTRASSEETSSIDTNELITDLKEKWDGLENKS----TVLIYGGGAIVAVWLSSIVV 121

Query: 205 GAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGSD 251
           GA++S+PL+PK++E+VGLGY+ WF  RYLLFK SR ELA  I+ +K+++ GS+
Sbjct: 122 GAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of CcUC10G193980 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-07
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 85  ASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVET 144
           +SS  + DS A   P  ++A+        +   P +  +    A+ AT         V T
Sbjct: 7   SSSSTIIDSRA---PPSRLASASASSPSCI-SLPTLPIQSHTRAAKATAYCRKIVRNVVT 66

Query: 145 VASEEPKEQPVEGAQEQ----------AFESWNDLKLESVDTYSLVLYGGGAFFGIWLVS 204
            A+ E  E P    + +          A E+W  +     D Y++          +W  +
Sbjct: 67  RATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVD----DKYAIGSLAFAGVVALWGSA 126

Query: 205 AVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGS 250
            ++ A+D +PLVP +LE+VG+GY+ WFT + L+FK  R+ L  K+    + +LGS
Sbjct: 127 GMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of CcUC10G193980 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-07
Identity = 47/175 (26.86%), Postives = 79/175 (45.14%), Query Frame = 0


Query: 85  ASSVPLEDSSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVET 144
           +SS  + DS A   P  ++A+        +   P +  +    A+ AT         V T
Sbjct: 7   SSSSTIIDSRA---PPSRLASASASSPSCI-SLPTLPIQSHTRAAKATAYCRKIVRNVVT 66

Query: 145 VASEEPKEQPVEGAQEQ----------AFESWNDLKLESVDTYSLVLYGGGAFFGIWLVS 204
            A+ E  E P    + +          A E+W  +     D Y++          +W  +
Sbjct: 67  RATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVD----DKYAIGSLAFAGVVALWGSA 126

Query: 205 AVVGAVDSIPLVPKLLEVVGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLGS 250
            ++ A+D +PLVP +LE+VG+GY+ WFT + L+FK  R+ L  K+    + +LGS
Sbjct: 127 GMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of CcUC10G193980 vs. TAIR 10
Match: AT1G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-06
Identity = 39/156 (25.00%), Postives = 67/156 (42.95%), Query Frame = 0


Query: 93  SSAVELPSDKIATTEVPKEEPVEDAPVVTPEDFPSASSATLADSSSGGKVETVASEEPKE 152
           S +  LPS  + T        ++  P          S  +L  + S   +   AS E  +
Sbjct: 3   SISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESSD 62

Query: 153 QPVEGAQEQAFESWNDLKLESVDTYSLVLYGGGAFFGIWLVSAVVGAVDSIPLVPKLLEV 212
              +       ++W+    +S D   L+  G      +W    ++ A+D +P++    E+
Sbjct: 63  SSTDLDVVSTIQNWD----KSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFEL 122

Query: 213 VGLGYSVWFTARYLLFKESRDELAAKIDEVKEQVLG 249
           VG+ +S WFT RYLLFK  R EL+  + +    +LG
Sbjct: 123 VGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 154

The following BLAST results are available for this feature:

BLAST of CcUC10G193980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653358.1	9.7e-95	79.20	protein CURVATURE THYLAKOID 1B, chloroplastic [Cucumis sativus] >KGN53657.1 hypo...	[more]
XP_038903367.1	3.2e-90	79.68	protein CURVATURE THYLAKOID 1D, chloroplastic-like [Benincasa hispida]	[more]
XP_008455610.1	1.5e-87	75.60	PREDICTED: protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 [Cucumis mel...	[more]
XP_022990797.1	3.0e-72	63.10	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]	[more]
XP_022136669.1	5.2e-72	67.19	protein CURVATURE THYLAKOID 1B, chloroplastic-like [Momordica charantia]	[more]

BLAST of CcUC10G193980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDD3	1.7e-25	55.45	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	8.4e-17	35.84	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	1.1e-05	26.86	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CcUC10G193980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ51	4.7e-95	79.20	CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G097640 PE=4 S...	[more]
A0A5D3BCB5	7.3e-88	75.60	Protein CURVATURE THYLAKOID 1D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C1G0	7.3e-88	75.60	protein CURVATURE THYLAKOID 1D, chloroplastic isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A6J1JJV3	1.5e-72	63.10	protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 OS=Cucurbita maxim...	[more]
A0A6J1C4Z6	2.5e-72	67.19	protein CURVATURE THYLAKOID 1B, chloroplastic-like OS=Momordica charantia OX=367...	[more]

BLAST of CcUC10G193980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38100.1	1.2e-26	55.45	unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl...	[more]
AT4G01150.1	6.0e-18	35.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G46820.1	8.1e-07	26.86	photosystem I P subunit	[more]
AT2G46820.2	8.1e-07	26.86	photosystem I P subunit	[more]
AT1G52220.2	5.3e-06	25.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 175..248 e-value: 5.9E-25 score: 86.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..93
None	No IPR available	PANTHER	PTHR33222:SF2	PROTEIN CURVATURE THYLAKOID 1D, CHLOROPLASTIC	coord: 22..249
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 22..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G193980.1	CcUC10G193980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid