CcUC10G192650 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G192650
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat
Location	CicolChr10: 9815428 .. 9817479 (+)
RNA-Seq Expression	CcUC10G192650
Synteny	CcUC10G192650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTTTACCGCTTCCTCCTCCGCTCTCTCCGCCGTTCTTCAACCTCTCCGTCACACTCCCGGGCTCTTACCGTTGGTCCTCTGAACCACCATTTTCAGGAGCCGATTTCACCTTCCTCTCAAAGTTCTTCTCCCATCTCGCTCCTCCATGCCCGTTCATTTTCCTTTTCCTCTGCCGAAGAAGCTGCTGCCGAAAGACGCCGTAGAAAGCGCCGCCTTCGTATTGAACCGCCTCTCCATGCACTTCGTCGCGACAACTATCCACCCCCACAGCGTGATCCCAATGCTCCTCGTCTTCCTGACTCCACATCCGCTCTTGTGGGGCCGCGTCTTAACCTTCACAATCGTGTTCAATCCCTGATTCGTGCTGGTGATCTTGATGCGGCTTCTGCGGTCGCTCGCCACTCTGTGTTCTCGAACACGCGGCCGACGGTTTTCACTTGTAACGCTATTATTGCTGCGATGTATCGAGCTAAAAGGTATAGTGATGCGATTGCACTGTTTCAGTTCTTCTTTAACCAGTCGAATATAGTTCCCAATGTTGTATCGTATAATAATTTGATTAATGCTCATTGCGATGAGGGTCGAGTTGATGTGGGTCTTGAGATTTATCGTCATATTATTGCGAATGCTCCGTTTAGTCCTTCGGCAGTGACTTATCGGCATTTGACAAAGGGATTGATTGATTCTGGGAAGATTGGGGAGGCTGTGGATCTTCTGCGTGAAATGTTGAATAAAGGGCACGGGGCTGATTCGTTGGTTTTTAATAATTTGATTTCCGGTTTTCTAAATTTGGAGAATTTGGAGAAGGCGAATGAACTGTTTGATGAGTTGAAGGAGAGGTGTTTGGTGTATGATGGAGTTGTGAATGCTACGTTCATGGATTGGTTTTTTAATAGAGGGAAAGAAAAGGAGGCCATGGAATCGTACAAGTCATTGCTTGATAGGCAATTTAAAATGATTCCAGCGACTTGCAATGTGCTGTTGGAGGTATTGCTTAGGCATGGGAAGAAAACGGAGGCTTGGACCTTATTTGATCAGATGTTGGATAACCACACTCCACCGAATTTCCAAGCAGTCAATTCAGATACGTTCAACATAATGGTTAATGAGTGCTTTAAGCTCGGCAAGTTCTCAGAGGCGGTAGAGACTTTCCGGAAGGTGGGAACTCAACCAAAGTCAAGGCCTTTTGCTATGGACGTTGCAGGGTATAATAATATCATTGCAAGGTTTTGTGAGCAGGGAATGATGACAGATGCAGAGACTTTCTTTGCTGAACTTTGCTCTAAGTCTTTGTCCCCTGATGTCCCAACTCATAGAACACTGATAGAATCTTATTTAAAGATTGGGCAGATTGATGATGTATTGAGAGTTTTTAACAGAATGGTCGATGTTGGTTTGAGAGTTGTTGCTAGCTTTGGGAATACGGTATTTGGTGAATTGATTAAGAATGGCAAGGCAATTGACTGTGCTCAGATTTTAACAAAAATGGGAGAGCGTGATCCTAAACCAGATCCCACATGCTATGACGTTGTGATTAGAGGGCTATGTAATGAAGGTGCGCTGGATGCTAGTCGGGAGTTGCTTGACCAGATAATGAGGTACGGTATTGGCCTCACTCCCACACTTCAGGAATTTGTTAAAGAGGCATTTGTAAAGGCTGGTCGGCATGAAGAGATTGAAAGACTGCTAAATATGAATAGATGGGGACATGTTCCGTATCGCCCCCCCTCTGGACCCTCAAGAATTTCACATTCGCAGGTACCACCTCAAATGGAACCAGCTCAAGGACCCCCTAAAATGGCAGAACCAAATTGGCGACCTTCCATAAACCCTCAAGCCAGAGGAAGTTATGCCCCCTCATCACCTCAGATGTCGGGTCCTAGTTATTTTCAATCAGGATCGGCTCAAATGACAGGTCCTAATTATTTTCAATCAGGATCGGCTCAAATGACAAGACCGCGACAGCCTTCATCCGATCCATCCCCAATGGAAGAACAGCATCACTCAGAACAACCTCCTCAAATGGCTGGCCAGGGGGTAGCTTGA

mRNA sequence

ATGTCACTTTACCGCTTCCTCCTCCGCTCTCTCCGCCGTTCTTCAACCTCTCCGTCACACTCCCGGGCTCTTACCGTTGGTCCTCTGAACCACCATTTTCAGGAGCCGATTTCACCTTCCTCTCAAAGTTCTTCTCCCATCTCGCTCCTCCATGCCCGTTCATTTTCCTTTTCCTCTGCCGAAGAAGCTGCTGCCGAAAGACGCCGTAGAAAGCGCCGCCTTCGTATTGAACCGCCTCTCCATGCACTTCGTCGCGACAACTATCCACCCCCACAGCGTGATCCCAATGCTCCTCGTCTTCCTGACTCCACATCCGCTCTTGTGGGGCCGCGTCTTAACCTTCACAATCGTGTTCAATCCCTGATTCGTGCTGGTGATCTTGATGCGGCTTCTGCGGTCGCTCGCCACTCTGTGTTCTCGAACACGCGGCCGACGGTTTTCACTTGTAACGCTATTATTGCTGCGATGTATCGAGCTAAAAGGTATAGTGATGCGATTGCACTGTTTCAGTTCTTCTTTAACCAGTCGAATATAGTTCCCAATGTTGTATCGTATAATAATTTGATTAATGCTCATTGCGATGAGGGTCGAGTTGATGTGGGTCTTGAGATTTATCGTCATATTATTGCGAATGCTCCGTTTAGTCCTTCGGCAGTGACTTATCGGCATTTGACAAAGGGATTGATTGATTCTGGGAAGATTGGGGAGGCTGTGGATCTTCTGCGTGAAATGTTGAATAAAGGGCACGGGGCTGATTCGTTGGTTTTTAATAATTTGATTTCCGGTTTTCTAAATTTGGAGAATTTGGAGAAGGCGAATGAACTGTTTGATGAGTTGAAGGAGAGGTGTTTGGTGTATGATGGAGTTGTGAATGCTACGTTCATGGATTGGTTTTTTAATAGAGGGAAAGAAAAGGAGGCCATGGAATCGTACAAGTCATTGCTTGATAGGCAATTTAAAATGATTCCAGCGACTTGCAATGTGCTGTTGGAGGTATTGCTTAGGCATGGGAAGAAAACGGAGGCTTGGACCTTATTTGATCAGATGTTGGATAACCACACTCCACCGAATTTCCAAGCAGTCAATTCAGATACGTTCAACATAATGGTTAATGAGTGCTTTAAGCTCGGCAAGTTCTCAGAGGCGGTAGAGACTTTCCGGAAGGTGGGAACTCAACCAAAGTCAAGGCCTTTTGCTATGGACGTTGCAGGGTATAATAATATCATTGCAAGGTTTTGTGAGCAGGGAATGATGACAGATGCAGAGACTTTCTTTGCTGAACTTTGCTCTAAGTCTTTGTCCCCTGATGTCCCAACTCATAGAACACTGATAGAATCTTATTTAAAGATTGGGCAGATTGATGATGTATTGAGAGTTTTTAACAGAATGGTCGATGTTGGTTTGAGAGTTGTTGCTAGCTTTGGGAATACGGTATTTGGTGAATTGATTAAGAATGGCAAGGCAATTGACTGTGCTCAGATTTTAACAAAAATGGGAGAGCGTGATCCTAAACCAGATCCCACATGCTATGACGTTGTGATTAGAGGGCTATGTAATGAAGGTGCGCTGGATGCTAGTCGGGAGTTGCTTGACCAGATAATGAGGTACGGTATTGGCCTCACTCCCACACTTCAGGAATTTGTTAAAGAGGCATTTGTAAAGGCTGGTCGGCATGAAGAGATTGAAAGACTGCTAAATATGAATAGATGGGGACATGTTCCGTATCGCCCCCCCTCTGGACCCTCAAGAATTTCACATTCGCAGGTACCACCTCAAATGGAACCAGCTCAAGGACCCCCTAAAATGGCAGAACCAAATTGGCGACCTTCCATAAACCCTCAAGCCAGAGGAAGTTATGCCCCCTCATCACCTCAGATGTCGGGTCCTAGTTATTTTCAATCAGGATCGGCTCAAATGACAGGTCCTAATTATTTTCAATCAGGATCGGCTCAAATGACAAGACCGCGACAGCCTTCATCCGATCCATCCCCAATGGAAGAACAGCATCACTCAGAACAACCTCCTCAAATGGCTGGCCAGGGGGTAGCTTGA

Coding sequence (CDS)

ATGTCACTTTACCGCTTCCTCCTCCGCTCTCTCCGCCGTTCTTCAACCTCTCCGTCACACTCCCGGGCTCTTACCGTTGGTCCTCTGAACCACCATTTTCAGGAGCCGATTTCACCTTCCTCTCAAAGTTCTTCTCCCATCTCGCTCCTCCATGCCCGTTCATTTTCCTTTTCCTCTGCCGAAGAAGCTGCTGCCGAAAGACGCCGTAGAAAGCGCCGCCTTCGTATTGAACCGCCTCTCCATGCACTTCGTCGCGACAACTATCCACCCCCACAGCGTGATCCCAATGCTCCTCGTCTTCCTGACTCCACATCCGCTCTTGTGGGGCCGCGTCTTAACCTTCACAATCGTGTTCAATCCCTGATTCGTGCTGGTGATCTTGATGCGGCTTCTGCGGTCGCTCGCCACTCTGTGTTCTCGAACACGCGGCCGACGGTTTTCACTTGTAACGCTATTATTGCTGCGATGTATCGAGCTAAAAGGTATAGTGATGCGATTGCACTGTTTCAGTTCTTCTTTAACCAGTCGAATATAGTTCCCAATGTTGTATCGTATAATAATTTGATTAATGCTCATTGCGATGAGGGTCGAGTTGATGTGGGTCTTGAGATTTATCGTCATATTATTGCGAATGCTCCGTTTAGTCCTTCGGCAGTGACTTATCGGCATTTGACAAAGGGATTGATTGATTCTGGGAAGATTGGGGAGGCTGTGGATCTTCTGCGTGAAATGTTGAATAAAGGGCACGGGGCTGATTCGTTGGTTTTTAATAATTTGATTTCCGGTTTTCTAAATTTGGAGAATTTGGAGAAGGCGAATGAACTGTTTGATGAGTTGAAGGAGAGGTGTTTGGTGTATGATGGAGTTGTGAATGCTACGTTCATGGATTGGTTTTTTAATAGAGGGAAAGAAAAGGAGGCCATGGAATCGTACAAGTCATTGCTTGATAGGCAATTTAAAATGATTCCAGCGACTTGCAATGTGCTGTTGGAGGTATTGCTTAGGCATGGGAAGAAAACGGAGGCTTGGACCTTATTTGATCAGATGTTGGATAACCACACTCCACCGAATTTCCAAGCAGTCAATTCAGATACGTTCAACATAATGGTTAATGAGTGCTTTAAGCTCGGCAAGTTCTCAGAGGCGGTAGAGACTTTCCGGAAGGTGGGAACTCAACCAAAGTCAAGGCCTTTTGCTATGGACGTTGCAGGGTATAATAATATCATTGCAAGGTTTTGTGAGCAGGGAATGATGACAGATGCAGAGACTTTCTTTGCTGAACTTTGCTCTAAGTCTTTGTCCCCTGATGTCCCAACTCATAGAACACTGATAGAATCTTATTTAAAGATTGGGCAGATTGATGATGTATTGAGAGTTTTTAACAGAATGGTCGATGTTGGTTTGAGAGTTGTTGCTAGCTTTGGGAATACGGTATTTGGTGAATTGATTAAGAATGGCAAGGCAATTGACTGTGCTCAGATTTTAACAAAAATGGGAGAGCGTGATCCTAAACCAGATCCCACATGCTATGACGTTGTGATTAGAGGGCTATGTAATGAAGGTGCGCTGGATGCTAGTCGGGAGTTGCTTGACCAGATAATGAGGTACGGTATTGGCCTCACTCCCACACTTCAGGAATTTGTTAAAGAGGCATTTGTAAAGGCTGGTCGGCATGAAGAGATTGAAAGACTGCTAAATATGAATAGATGGGGACATGTTCCGTATCGCCCCCCCTCTGGACCCTCAAGAATTTCACATTCGCAGGTACCACCTCAAATGGAACCAGCTCAAGGACCCCCTAAAATGGCAGAACCAAATTGGCGACCTTCCATAAACCCTCAAGCCAGAGGAAGTTATGCCCCCTCATCACCTCAGATGTCGGGTCCTAGTTATTTTCAATCAGGATCGGCTCAAATGACAGGTCCTAATTATTTTCAATCAGGATCGGCTCAAATGACAAGACCGCGACAGCCTTCATCCGATCCATCCCCAATGGAAGAACAGCATCACTCAGAACAACCTCCTCAAATGGCTGGCCAGGGGGTAGCTTGA

Protein sequence

MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFGELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEPAQGPPKMAEPNWRPSINPQARGSYAPSSPQMSGPSYFQSGSAQMTGPNYFQSGSAQMTRPRQPSSDPSPMEEQHHSEQPPQMAGQGVA

Homology

[Close]

BLAST of CcUC10G192650 vs. NCBI nr
Match: XP_022984748.1 (pentatricopeptide repeat-containing protein At1g10270-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1250.0 bits (3233), Expect = 0.0e+00
Identity = 635/707 (89.82%), Postives = 652/707 (92.22%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS++L++GPLNHH   PI PSSQSSSPISLLHARSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVI+GLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQM----EPA 600
           TP LQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM     P 
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 QGPPKMAEPNWRPSINPQARGSYAPSSPQMSGP--------------------SYFQSGS 660
           QG P MAEP+WRPSINPQARGSYAPSSPQM+GP                      +   S
Sbjct: 601 QGHPPMAEPHWRPSINPQARGSYAPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSS 660

Query: 661 AQMTGPNYFQSGSAQMTRPRQPSSDPSPMEEQHHSEQPPQMAGQGVA 684
            QMTGPNYFQSGSAQMTRP+QP  DPSPMEEQHHS+QPPQ+AGQ VA
Sbjct: 661 PQMTGPNYFQSGSAQMTRPQQPPFDPSPMEEQHHSQQPPQIAGQTVA 707

[Close]

BLAST of CcUC10G192650 vs. NCBI nr
Match: XP_023552663.1 (pentatricopeptide repeat-containing protein At1g10270-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1240.7 bits (3209), Expect = 0.0e+00
Identity = 637/740 (86.08%), Postives = 652/740 (88.11%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS+AL++GPLNHH   PI PSSQSSSPISLLH RSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQALSIGPLNHHLLSPIPPSSQSSSPISLLHVRSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEP----- 600
           TPTLQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM P     
Sbjct: 541 TPTLQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 --------------------------------AQGPPKMAEPNWRPSINPQARGSYAPSS 660
                                            QG P MAEP+WRPSINPQA GSYAPSS
Sbjct: 601 QGHPPMAEPHWRPSINPQAGGSYGPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYAPSS 660

Query: 661 PQMSGP--------------------SYFQSGSAQMTGPNYFQSGSAQMTRPRQPSSDPS 684
           PQM+GP                      +   S QMTGPNYFQSGSAQMTRP+QPS DPS
Sbjct: 661 PQMTGPQGHTPMAEPHWRPSINPQAGGSYGPSSPQMTGPNYFQSGSAQMTRPQQPSFDPS 720

[Close]

BLAST of CcUC10G192650 vs. NCBI nr
Match: XP_022984746.1 (pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita maxima] >XP_022984747.1 pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 635/740 (85.81%), Postives = 652/740 (88.11%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS++L++GPLNHH   PI PSSQSSSPISLLHARSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVI+GLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEP----- 600
           TP LQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM P     
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 --------------------------------AQGPPKMAEPNWRPSINPQARGSYAPSS 660
                                            QG P MAEP+WRPSINPQARGSYAPSS
Sbjct: 601 QGHPPMAEPHWQPSINPQAGGSCAPSSPQMTGPQGHPPMAEPHWRPSINPQARGSYAPSS 660

Query: 661 PQMSGP--------------------SYFQSGSAQMTGPNYFQSGSAQMTRPRQPSSDPS 684
           PQM+GP                      +   S QMTGPNYFQSGSAQMTRP+QP  DPS
Sbjct: 661 PQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSSPQMTGPNYFQSGSAQMTRPQQPPFDPS 720

[Close]

BLAST of CcUC10G192650 vs. NCBI nr
Match: XP_038905008.1 (pentatricopeptide repeat-containing protein At1g10270 [Benincasa hispida])

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 646/814 (79.36%), Postives = 657/814 (80.71%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYRFLLRSL RSSTSPS+SR LT+GPLNHHFQEPI P     SPISLLHARSF+FSSA
Sbjct: 1   MSLYRFLLRSLHRSSTSPSNSRTLTIGPLNHHFQEPIPP-----SPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRY DAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+I EAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIEEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIESYLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNKVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGKA+DCAQILTKMGERDPKPDPTCYDVVIRGLCNEG LDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKAVDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGELDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEPAQGPP 600
           TPTLQEFVKEAF KAGRHEEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM P QG P
Sbjct: 541 TPTLQEFVKEAFGKAGRHEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPQGSP 600

Query: 601 KMAEPNWRPSINPQARGSYAPSSP------------------------------------ 660
           +M EPNWRPSINPQARGSYAPSSP                                    
Sbjct: 601 QMTEPNWRPSINPQARGSYAPSSPQMSGSNYFQSGSDQMMRPQQPSSEPTQLGAPQGPRQ 660

Query: 661 ------------------------------------------------------------ 684
                                                                       
Sbjct: 661 MVEPNWQPSINPQARGSFAPSSPQLSDPSYFQTGSTQMTGPNYFQSGLAQMTRSQQPSYE 720

[Close]

BLAST of CcUC10G192650 vs. NCBI nr
Match: XP_023552661.1 (pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552662.1 pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1229.5 bits (3180), Expect = 0.0e+00
Identity = 640/773 (82.79%), Postives = 654/773 (84.61%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS+AL++GPLNHH   PI PSSQSSSPISLLH RSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQALSIGPLNHHLLSPIPPSSQSSSPISLLHVRSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQM----EPA 600
           TPTLQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM     P 
Sbjct: 541 TPTLQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 QGPPKMAEPNWRPSINPQARGSYAPSSPQMSGP--------------------------- 660
           QG P MAEP+WRPSINPQA GSYAPSSPQM+GP                           
Sbjct: 601 QGHPPMAEPHWRPSINPQAGGSYAPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSS 660

Query: 661 ---------------------------SYFQS---------------------------- 684
                                      SY  S                            
Sbjct: 661 PQMTGPQGHPPMAEPHWRPSINPQAGGSYAPSSPQMTGPQGHTPMAEPHWRPSINPQAGG 720

[Close]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot
Match: Q9SY69 (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 8.0e-211
Identity = 382/635 (60.16%), Postives = 478/635 (75.28%), Query Frame = 0


Query: 53  RSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRD-NYPPPQRDPNAPRLPDSTSALVGPR 112
           R+ +FSSAEEAAAERRRRKRRLRIEPPLHALRRD + PPP+RDPNAPRLPDSTSALVG R
Sbjct: 86  RTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQR 145

Query: 113 LNLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQF 172
           LNLHNRVQSLIRA DLDAAS +AR SVFSNTRPTVFTCNAIIAAMYRAKRYS++I+LFQ+
Sbjct: 146 LNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQY 205

Query: 173 FFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDS 232
           FF QSNIVPNVVSYN +INAHCDEG VD  LE+YRHI+ANAPF+PS+VTYRHLTKGL+ +
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265

Query: 233 GKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVN 292
           G+IG+A  LLREML+KG  ADS V+NNLI G+L+L + +KA E FDELK +C VYDG+VN
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325

Query: 293 ATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLD 352
           ATFM+++F +G +KEAMESY+SLLD++F+M P T NVLLEV L+ GKK EAW LF++MLD
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385

Query: 353 NHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIAR 412
           NH PPN  +VNSDT  IMVNECFK+G+FSEA+ TF+KVG++  S+PF MD  GY NI+ R
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445

Query: 413 FCEQGMMTDAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVV 472
           FCEQGM+T+AE FFAE  S+SL  D P+HR +I++YLK  +IDD +++ +RMVDV LRVV
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505

Query: 473 ASFGNTVFGELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLD 532
           A FG  VFGELIKNGK  + A++LTKMGER+PKPDP+ YDVV+RGLC+  ALD +++++ 
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565

Query: 533 QIMRYGIGLTPTLQEFVKEAFVKAGRHEEIERLLN-----MNRWGHVPYRPPSGPSRISH 592
           +++R+ +G+T  L+EF+ E F KAGR EEIE++LN     +   G     PP  P+    
Sbjct: 566 EMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNAGQSGNTPPRVPAVFGT 625

Query: 593 SQVPPQMEPAQGPPKMAEPNWRPSINPQARGSYAPSSPQMSGPSY----FQSGSAQMTGP 652
           +   PQ       P+   P     +     G    ++ Q +G +Y     Q+ S   T  
Sbjct: 626 TPAAPQQ------PRDRAPWTSQGVVHSNSGWANGTAGQTAGGAYKANNGQNPSWSNTSD 685

Query: 653 NYFQSGSAQMTRPRQPSS----DPSPMEEQHHSEQ 674
           N  Q   +  T  +QP S     P   ++Q  S+Q
Sbjct: 686 NQQQQSWSNQTAGQQPPSWSRQAPGYQQQQSWSQQ 714

[Close]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot
Match: Q9M3A8 (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.8e-93
Identity = 202/530 (38.11%), Postives = 306/530 (57.74%), Query Frame = 0


Query: 46  PISLLHARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRR-----DNYPPPQRDPNAPRL 105
           P   L  R  SF++ EEAAAERRRRKRRLR+EPP+++  R        P P ++PN P+L
Sbjct: 25  PQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPPVNSFNRSQQQQSQIPRPIQNPNIPKL 84

Query: 106 PDSTSALVGPRLNLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAK 165
           P+S SALVG RL+LHN +  LIR  DL+ A+   RHSV+SN RPT+FT N ++AA  R  
Sbjct: 85  PESVSALVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQA 144

Query: 166 RYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVT 225
           +Y  A+     F NQ+ I PN+++YN +  A+ D  + ++ LE Y+  I NAP +PS  T
Sbjct: 145 KYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIAT 204

Query: 226 YRHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELK 285
           +R L KGL+ +  + +A+++  +M  KG   D +V++ L+ G +   + +   +L+ ELK
Sbjct: 205 FRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELK 264

Query: 286 ERC--LVYDGVVNATFMDWFFNRGKEKEAMESYKSLL--DRQFKMIPATCNVLLEVLLRH 345
           E+    V DGVV    M  +F +  EKEAME Y+  +  + + +M     N +LE L  +
Sbjct: 265 EKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSEN 324

Query: 346 GKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSR 405
           GK  EA  LFD +   H PP   AVN  TFN+MVN     GKF EA+E FR++G   K  
Sbjct: 325 GKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG-DFKCS 384

Query: 406 PFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDV 465
           P   D   +NN++ + C+  ++ +AE  + E+  K++ PD  T+  L+++  K G+ID+ 
Sbjct: 385 P---DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 444

Query: 466 LRVFNRMVDVGLRVVASFGNTVFGELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRG 525
              +  MV+  LR   +  N +  +LIK GK +D A+    M     K D   Y  ++R 
Sbjct: 445 AAYYKTMVESNLRPNLAVYNRLQDQLIKAGK-LDDAKSFFDMMVSKLKMDDEAYKFIMRA 504

Query: 526 LCNEGALDASRELLDQIMRYG-IGLTPTLQEFVKEAFVKAGRHEEIERLL 566
           L   G LD   +++D+++    + ++  LQEFVKE   K GR  ++E+L+
Sbjct: 505 LSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548

[Close]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot
Match: Q9LEX6 (Pentatricopeptide repeat-containing protein At3g60960, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60960 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 3.2e-58
Identity = 146/402 (36.32%), Postives = 223/402 (55.47%), Query Frame = 0


Query: 90  PPQRDPNA-PRL-PDSTSALVGPRLNLHNRVQSLIRAGDLDAASAVARHSV---FSNTRP 149
           P  RDP++ P+L P S S +    ++L  RV+++I   +LD AS ++R +V   F   R 
Sbjct: 27  PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86

Query: 150 TVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEI 209
           TVF CN++I AM  AKRY DAI+LF +FFN+S  +PN +S + +I AHCD+G VD  LE+
Sbjct: 87  TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146

Query: 210 YRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFL 269
           YRHI+ +   +P   TY  L K L+D+ +  EA  L R M         +V++ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFL 206

Query: 270 NLENLEKANELFDELKERCLVYDG--------VVNATFMDWFFNRGKEKEAMESYKSLLD 329
           ++ N  KA+++F+ELK       G        + N +FM+++F +GK++EAME   +L D
Sbjct: 207 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 266

Query: 330 RQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKL 389
            Q  + P   N +L+VL++HGKKTEAW LF +M+        +  +S+T +IM       
Sbjct: 267 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE----- 326

Query: 390 GKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSK----- 449
             FSE    F +           +    Y  +I   CE G ++DAE  FAE+ +      
Sbjct: 327 -YFSEKTVPFER-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGD 386

Query: 450 -SLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVA 473
             + PD+   R +I  Y+ +G++DD ++  N+M    LR +A
Sbjct: 387 LLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLRKLA 398

[Close]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot
Match: Q9LEX5 (Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60980 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.6e-57
Identity = 143/380 (37.63%), Postives = 219/380 (57.63%), Query Frame = 0


Query: 117 RVQSLIR-AGDLDAASAVARHSVFSN--TRPTVFTCNAIIAAMYRAKRYSDAIALFQFFF 176
           RV  LIR  GDLD A+  AR +VF++  +  T   C +II  M R KR  DA  L++FFF
Sbjct: 38  RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97

Query: 177 NQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFS--PSAVTYRHLTKGLIDS 236
           NQ N+ PN   +N +I +   +G V+  L  +   I +      PS  ++R LTKGL+ S
Sbjct: 98  NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157

Query: 237 GKIGEAVDLLR-EMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLV----- 296
           G++ +A   LR   +N+    D + +NNLI GFL+L N +KAN +  E K   L+     
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217

Query: 297 --------YDGVV---NATFMDWFFNRGKEKEAMESY-KSLLDRQFKMIPATCNVLLEVL 356
                   Y+  V    ATFM+++F +GK+ EAME Y + +L  +  +   T N LL+VL
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNALLKVL 277

Query: 357 LRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 416
           L++G+K  AW L+ ++LD +       ++SDT  IMV+ECF +G FSEA+ET++K   +P
Sbjct: 278 LKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFDMGWFSEAMETYKK--ARP 337

Query: 417 KSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSKSLS-PDVPTHRTLIESYLKIGQ 473
           K+     D      II RFCE  M+++AE+ F +  +      DV T++T+I++Y+K G+
Sbjct: 338 KN-----DYLSDKYIITRFCENRMLSEAESVFVDSLADDFGYIDVNTYKTMIDAYVKAGR 397

[Close]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 8.4e-35
Identity = 112/445 (25.17%), Postives = 189/445 (42.47%), Query Frame = 0


Query: 123 RAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFF--FNQSNIVP 182
           R+G+   +  +    V     P V  C  +I   +  +    A+ + +    F Q    P
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----P 160

Query: 183 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 242
           +V +YN LIN  C   R+D    +    + +  FSP  VTY  +   L   GK+  A+ +
Sbjct: 161 DVFAYNALINGFCKMNRIDDATRVLDR-MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 220

Query: 243 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 302
           L ++L+       + +  LI   +    +++A +L DE+  R L  D     T +     
Sbjct: 221 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 280

Query: 303 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 362
            G    A E  ++L  +  +    + N+LL  LL  GK  E   L  +M      PN   
Sbjct: 281 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV- 340

Query: 363 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 422
               T++I++    + GK  EA+   + +    K +    D   Y+ +IA FC +G +  
Sbjct: 341 ----TYSILITTLCRDGKIEEAMNLLKLM----KEKGLTPDAYSYDPLIAAFCREGRLDV 400

Query: 423 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 482
           A  F   + S    PD+  + T++ +  K G+ D  L +F ++ +VG    +S  NT+F 
Sbjct: 401 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 460

Query: 483 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 542
            L  +G  I    ++ +M      PD   Y+ +I  LC EG +D + ELL  +       
Sbjct: 461 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 520

Query: 543 TPTLQEFVKEAFVKAGRHEEIERLL 566
           +      V   F KA R E+   +L
Sbjct: 521 SVVTYNIVLLGFCKAHRIEDAINVL 531

[Close]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL
Match: A0A6J1JBF6 (pentatricopeptide repeat-containing protein At1g10270-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482933 PE=4 SV=1)

HSP 1 Score: 1250.0 bits (3233), Expect = 0.0e+00
Identity = 635/707 (89.82%), Postives = 652/707 (92.22%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS++L++GPLNHH   PI PSSQSSSPISLLHARSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVI+GLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQM----EPA 600
           TP LQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM     P 
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 QGPPKMAEPNWRPSINPQARGSYAPSSPQMSGP--------------------SYFQSGS 660
           QG P MAEP+WRPSINPQARGSYAPSSPQM+GP                      +   S
Sbjct: 601 QGHPPMAEPHWRPSINPQARGSYAPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSS 660

Query: 661 AQMTGPNYFQSGSAQMTRPRQPSSDPSPMEEQHHSEQPPQMAGQGVA 684
            QMTGPNYFQSGSAQMTRP+QP  DPSPMEEQHHS+QPPQ+AGQ VA
Sbjct: 661 PQMTGPNYFQSGSAQMTRPQQPPFDPSPMEEQHHSQQPPQIAGQTVA 707

[Close]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL
Match: A0A6J1J312 (pentatricopeptide repeat-containing protein At1g10270-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482933 PE=4 SV=1)

HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 635/740 (85.81%), Postives = 652/740 (88.11%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS++L++GPLNHH   PI PSSQSSSPISLLHARSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVI+GLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEP----- 600
           TP LQEFVKEAFVKAGR EEIERLLNMNRWGH PYRPPSGP RIS SQVPPQM P     
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600

Query: 601 --------------------------------AQGPPKMAEPNWRPSINPQARGSYAPSS 660
                                            QG P MAEP+WRPSINPQARGSYAPSS
Sbjct: 601 QGHPPMAEPHWQPSINPQAGGSCAPSSPQMTGPQGHPPMAEPHWRPSINPQARGSYAPSS 660

Query: 661 PQMSGP--------------------SYFQSGSAQMTGPNYFQSGSAQMTRPRQPSSDPS 684
           PQM+GP                      +   S QMTGPNYFQSGSAQMTRP+QP  DPS
Sbjct: 661 PQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSSPQMTGPNYFQSGSAQMTRPQQPPFDPS 720

[Close]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL
Match: A0A6J1EMZ6 (pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata OX=3662 GN=LOC111436060 PE=4 SV=1)

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 633/740 (85.54%), Postives = 647/740 (87.43%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRALTVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSSA 60
           MSLYR LLRS RRSSTSPSHS+AL++GPLNHH   P  PSSQ SSPISLLHARSF+FSSA
Sbjct: 1   MSLYRLLLRSFRRSSTSPSHSQALSIGPLNHHLLSPFPPSSQ-SSPISLLHARSFAFSSA 60

Query: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
           EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS
Sbjct: 61  EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120

Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
           LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180

Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDL 240
           NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSG+IGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240

Query: 241 LREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
           LREMLNKGHGADSLV+NNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300

Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQA 360
           RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLL+HGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360

Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTD 420
           VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCEQGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMGD 420

Query: 421 AETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVFG 480
           AETFFAELCSKSLSPDVPTHRTLIE+YLKI QIDD LRVFNRMVDVGLRVVASFGN VFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480

Query: 481 ELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
           ELIKNGK +DCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540

Query: 541 TPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQMEP----- 600
           TPTLQEFVKEAFVKAGR EEIERLLNMNRWGH PYR PSGP RIS SQVPPQM P     
Sbjct: 541 TPTLQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRSPSGPPRISQSQVPPQMGPPHPPP 600

Query: 601 --------------------------------AQGPPKMAEPNWRPSINPQARGSYAPSS 660
                                            QG P MAEP+WRPSINPQA GSYAPSS
Sbjct: 601 QGHPPMAEPHWRPSINPQAGGSYGPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYAPSS 660

Query: 661 PQMSGP--------------------SYFQSGSAQMTGPNYFQSGSAQMTRPRQPSSDPS 684
           PQM+GP                      +   S QMTGP YFQSGSAQMTRP QP  DPS
Sbjct: 661 PQMTGPQGHTPMAEPHWRPSINPQARGSYGPSSPQMTGPKYFQSGSAQMTRPHQPPFDPS 720

[Close]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL
Match: A0A5A7TJN2 (ACT11D09.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00300 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 622/680 (91.47%), Postives = 642/680 (94.41%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRAL-TVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSS 60
           MS YRFLLRSLRRSSTSPS++ AL T+ PLNHH    I PSSQ+SSPISLL ARSFSFSS
Sbjct: 1   MSPYRFLLRSLRRSSTSPSYAPALTTIAPLNHH----IPPSSQTSSPISLLLARSFSFSS 60

Query: 61  AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ 120
           AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ
Sbjct: 61  AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ 120

Query: 121 SLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV 180
           SLIRAGDLDAAS+VARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV
Sbjct: 121 SLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV 180

Query: 181 PNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVD 240
           PNVVSYNNLINAHCDEGRVDVGLE+YRHIIANAPFSPSAVTYRHLTKGLID+G+I EAVD
Sbjct: 181 PNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVD 240

Query: 241 LLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFF 300
           LLREMLNKGHGADSLVFNNLISGFLNL NL KANELFDELKERCLVYDGVVNATFMDWFF
Sbjct: 241 LLREMLNKGHGADSLVFNNLISGFLNLGNLVKANELFDELKERCLVYDGVVNATFMDWFF 300

Query: 301 NRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQ 360
           N+GKEKEAMESYKSLLDRQFKM+PATCNVLLEVLL+H KKTEAWTLFDQMLDNHTPPNFQ
Sbjct: 301 NQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQ 360

Query: 361 AVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMT 420
           AVNSDTFNIMVNECFKLGKF+EAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMM 
Sbjct: 361 AVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMA 420

Query: 421 DAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVF 480
           DAETFFAELCSKSLSPDVPTHRTLIESYLKI QIDD LRVFNRMVDVGLRVVASFGN VF
Sbjct: 421 DAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVF 480

Query: 481 GELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIG 540
           GELIKNGKA DCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALD SRELLDQIMRYGIG
Sbjct: 481 GELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIG 540

Query: 541 LTPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQM-EPAQG 600
           LTPTL+EFVK+AFVKAGRHEEIERLLNMN+WGH  YRPPSGP RIS SQVPPQM  P QG
Sbjct: 541 LTPTLEEFVKDAFVKAGRHEEIERLLNMNKWGHAAYRPPSGPPRISQSQVPPQMGRPLQG 600

Query: 601 PPKMAEPNWRPSINPQARGSYAPSSPQMSGPSYFQSGSAQMTGPNYFQSGSAQMTRPRQP 660
           PP+MAEPNWRPSINPQARGSY  SSPQMS PS+FQSG  QMTG NYFQSGSAQMT+P+  
Sbjct: 601 PPQMAEPNWRPSINPQARGSY--SSPQMSSPSHFQSGPPQMTGSNYFQSGSAQMTKPQHS 660

Query: 661 SSDPSPMEEQHHSEQPPQMA 679
           S DP PMEE HHS+QPPQMA
Sbjct: 661 SFDPPPMEE-HHSQQPPQMA 673

[Close]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL
Match: Q6E438 (ACT11D09.4 OS=Cucumis melo OX=3656 GN=ACT11D09.4 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 622/680 (91.47%), Postives = 642/680 (94.41%), Query Frame = 0


Query: 1   MSLYRFLLRSLRRSSTSPSHSRAL-TVGPLNHHFQEPISPSSQSSSPISLLHARSFSFSS 60
           MS YRFLLRSLRRSSTSPS++ AL T+ PLNHH    I PSSQ+SSPISLL ARSFSFSS
Sbjct: 1   MSPYRFLLRSLRRSSTSPSYAPALTTIAPLNHH----IPPSSQTSSPISLLLARSFSFSS 60

Query: 61  AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ 120
           AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ
Sbjct: 61  AEEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQ 120

Query: 121 SLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV 180
           SLIRAGDLDAAS+VARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV
Sbjct: 121 SLIRAGDLDAASSVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIV 180

Query: 181 PNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVD 240
           PNVVSYNNLINAHCDEGRVDVGLE+YRHIIANAPFSPSAVTYRHLTKGLID+G+I EAVD
Sbjct: 181 PNVVSYNNLINAHCDEGRVDVGLEVYRHIIANAPFSPSAVTYRHLTKGLIDAGRIEEAVD 240

Query: 241 LLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFF 300
           LLREMLNKGHGADSLVFNNLISGFLNL NL KANELFDELKERCLVYDGVVNATFMDWFF
Sbjct: 241 LLREMLNKGHGADSLVFNNLISGFLNLGNLVKANELFDELKERCLVYDGVVNATFMDWFF 300

Query: 301 NRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQ 360
           N+GKEKEAMESYKSLLDRQFKM+PATCNVLLEVLL+H KKTEAWTLFDQMLDNHTPPNFQ
Sbjct: 301 NQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTEAWTLFDQMLDNHTPPNFQ 360

Query: 361 AVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMT 420
           AVNSDTFNIMVNECFKLGKF+EAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMM 
Sbjct: 361 AVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMA 420

Query: 421 DAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVASFGNTVF 480
           DAETFFAELCSKSLSPDVPTHRTLIESYLKI QIDD LRVFNRMVDVGLRVVASFGN VF
Sbjct: 421 DAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFNRMVDVGLRVVASFGNMVF 480

Query: 481 GELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIG 540
           GELIKNGKA DCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALD SRELLDQIMRYGIG
Sbjct: 481 GELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIG 540

Query: 541 LTPTLQEFVKEAFVKAGRHEEIERLLNMNRWGHVPYRPPSGPSRISHSQVPPQM-EPAQG 600
           LTPTL+EFVK+AFVKAGRHEEIERLLNMN+WGH  YRPPSGP RIS SQVPPQM  P QG
Sbjct: 541 LTPTLEEFVKDAFVKAGRHEEIERLLNMNKWGHAAYRPPSGPPRISQSQVPPQMGRPLQG 600

Query: 601 PPKMAEPNWRPSINPQARGSYAPSSPQMSGPSYFQSGSAQMTGPNYFQSGSAQMTRPRQP 660
           PP+MAEPNWRPSINPQARGSY  SSPQMS PS+FQSG  QMTG NYFQSGSAQMT+P+  
Sbjct: 601 PPQMAEPNWRPSINPQARGSY--SSPQMSSPSHFQSGPPQMTGSNYFQSGSAQMTKPQHS 660

Query: 661 SSDPSPMEEQHHSEQPPQMA 679
           S DP PMEE HHS+QPPQMA
Sbjct: 661 SFDPPPMEE-HHSQQPPQMA 673

[Close]

BLAST of CcUC10G192650 vs. TAIR 10
Match: AT1G10270.1 (glutamine-rich protein 23 )

HSP 1 Score: 734.9 bits (1896), Expect = 5.7e-212
Identity = 382/635 (60.16%), Postives = 478/635 (75.28%), Query Frame = 0


Query: 53  RSFSFSSAEEAAAERRRRKRRLRIEPPLHALRRD-NYPPPQRDPNAPRLPDSTSALVGPR 112
           R+ +FSSAEEAAAERRRRKRRLRIEPPLHALRRD + PPP+RDPNAPRLPDSTSALVG R
Sbjct: 86  RTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQR 145

Query: 113 LNLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQF 172
           LNLHNRVQSLIRA DLDAAS +AR SVFSNTRPTVFTCNAIIAAMYRAKRYS++I+LFQ+
Sbjct: 146 LNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQY 205

Query: 173 FFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDS 232
           FF QSNIVPNVVSYN +INAHCDEG VD  LE+YRHI+ANAPF+PS+VTYRHLTKGL+ +
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265

Query: 233 GKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLVYDGVVN 292
           G+IG+A  LLREML+KG  ADS V+NNLI G+L+L + +KA E FDELK +C VYDG+VN
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325

Query: 293 ATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLD 352
           ATFM+++F +G +KEAMESY+SLLD++F+M P T NVLLEV L+ GKK EAW LF++MLD
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385

Query: 353 NHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIAR 412
           NH PPN  +VNSDT  IMVNECFK+G+FSEA+ TF+KVG++  S+PF MD  GY NI+ R
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445

Query: 413 FCEQGMMTDAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVV 472
           FCEQGM+T+AE FFAE  S+SL  D P+HR +I++YLK  +IDD +++ +RMVDV LRVV
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505

Query: 473 ASFGNTVFGELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLD 532
           A FG  VFGELIKNGK  + A++LTKMGER+PKPDP+ YDVV+RGLC+  ALD +++++ 
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565

Query: 533 QIMRYGIGLTPTLQEFVKEAFVKAGRHEEIERLLN-----MNRWGHVPYRPPSGPSRISH 592
           +++R+ +G+T  L+EF+ E F KAGR EEIE++LN     +   G     PP  P+    
Sbjct: 566 EMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNAGQSGNTPPRVPAVFGT 625

Query: 593 SQVPPQMEPAQGPPKMAEPNWRPSINPQARGSYAPSSPQMSGPSY----FQSGSAQMTGP 652
           +   PQ       P+   P     +     G    ++ Q +G +Y     Q+ S   T  
Sbjct: 626 TPAAPQQ------PRDRAPWTSQGVVHSNSGWANGTAGQTAGGAYKANNGQNPSWSNTSD 685

Query: 653 NYFQSGSAQMTRPRQPSS----DPSPMEEQHHSEQ 674
           N  Q   +  T  +QP S     P   ++Q  S+Q
Sbjct: 686 NQQQQSWSNQTAGQQPPSWSRQAPGYQQQQSWSQQ 714

[Close]

BLAST of CcUC10G192650 vs. TAIR 10
Match: AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 4.8e-94
Identity = 202/530 (38.11%), Postives = 306/530 (57.74%), Query Frame = 0


Query: 46  PISLLHARSFSFSSAEEAAAERRRRKRRLRIEPPLHALRR-----DNYPPPQRDPNAPRL 105
           P   L  R  SF++ EEAAAERRRRKRRLR+EPP+++  R        P P ++PN P+L
Sbjct: 25  PQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPPVNSFNRSQQQQSQIPRPIQNPNIPKL 84

Query: 106 PDSTSALVGPRLNLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAK 165
           P+S SALVG RL+LHN +  LIR  DL+ A+   RHSV+SN RPT+FT N ++AA  R  
Sbjct: 85  PESVSALVGKRLDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQA 144

Query: 166 RYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVT 225
           +Y  A+     F NQ+ I PN+++YN +  A+ D  + ++ LE Y+  I NAP +PS  T
Sbjct: 145 KYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIAT 204

Query: 226 YRHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELK 285
           +R L KGL+ +  + +A+++  +M  KG   D +V++ L+ G +   + +   +L+ ELK
Sbjct: 205 FRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELK 264

Query: 286 ERC--LVYDGVVNATFMDWFFNRGKEKEAMESYKSLL--DRQFKMIPATCNVLLEVLLRH 345
           E+    V DGVV    M  +F +  EKEAME Y+  +  + + +M     N +LE L  +
Sbjct: 265 EKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSEN 324

Query: 346 GKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSR 405
           GK  EA  LFD +   H PP   AVN  TFN+MVN     GKF EA+E FR++G   K  
Sbjct: 325 GKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG-DFKCS 384

Query: 406 PFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSKSLSPDVPTHRTLIESYLKIGQIDDV 465
           P   D   +NN++ + C+  ++ +AE  + E+  K++ PD  T+  L+++  K G+ID+ 
Sbjct: 385 P---DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 444

Query: 466 LRVFNRMVDVGLRVVASFGNTVFGELIKNGKAIDCAQILTKMGERDPKPDPTCYDVVIRG 525
              +  MV+  LR   +  N +  +LIK GK +D A+    M     K D   Y  ++R 
Sbjct: 445 AAYYKTMVESNLRPNLAVYNRLQDQLIKAGK-LDDAKSFFDMMVSKLKMDDEAYKFIMRA 504

Query: 526 LCNEGALDASRELLDQIMRYG-IGLTPTLQEFVKEAFVKAGRHEEIERLL 566
           L   G LD   +++D+++    + ++  LQEFVKE   K GR  ++E+L+
Sbjct: 505 LSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548

[Close]

BLAST of CcUC10G192650 vs. TAIR 10
Match: AT3G60960.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 2.3e-59
Identity = 146/402 (36.32%), Postives = 223/402 (55.47%), Query Frame = 0


Query: 90  PPQRDPNA-PRL-PDSTSALVGPRLNLHNRVQSLIRAGDLDAASAVARHSV---FSNTRP 149
           P  RDP++ P+L P S S +    ++L  RV+++I   +LD AS ++R +V   F   R 
Sbjct: 27  PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86

Query: 150 TVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEI 209
           TVF CN++I AM  AKRY DAI+LF +FFN+S  +PN +S + +I AHCD+G VD  LE+
Sbjct: 87  TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146

Query: 210 YRHIIANAPFSPSAVTYRHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFL 269
           YRHI+ +   +P   TY  L K L+D+ +  EA  L R M         +V++ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFL 206

Query: 270 NLENLEKANELFDELKERCLVYDG--------VVNATFMDWFFNRGKEKEAMESYKSLLD 329
           ++ N  KA+++F+ELK       G        + N +FM+++F +GK++EAME   +L D
Sbjct: 207 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 266

Query: 330 RQFKMIPATCNVLLEVLLRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKL 389
            Q  + P   N +L+VL++HGKKTEAW LF +M+        +  +S+T +IM       
Sbjct: 267 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE----- 326

Query: 390 GKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSK----- 449
             FSE    F +           +    Y  +I   CE G ++DAE  FAE+ +      
Sbjct: 327 -YFSEKTVPFER-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGD 386

Query: 450 -SLSPDVPTHRTLIESYLKIGQIDDVLRVFNRMVDVGLRVVA 473
             + PD+   R +I  Y+ +G++DD ++  N+M    LR +A
Sbjct: 387 LLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLRKLA 398

[Close]

BLAST of CcUC10G192650 vs. TAIR 10
Match: AT3G60980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-58
Identity = 143/380 (37.63%), Postives = 219/380 (57.63%), Query Frame = 0


Query: 117 RVQSLIR-AGDLDAASAVARHSVFSN--TRPTVFTCNAIIAAMYRAKRYSDAIALFQFFF 176
           RV  LIR  GDLD A+  AR +VF++  +  T   C +II  M R KR  DA  L++FFF
Sbjct: 38  RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97

Query: 177 NQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFS--PSAVTYRHLTKGLIDS 236
           NQ N+ PN   +N +I +   +G V+  L  +   I +      PS  ++R LTKGL+ S
Sbjct: 98  NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157

Query: 237 GKIGEAVDLLR-EMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELKERCLV----- 296
           G++ +A   LR   +N+    D + +NNLI GFL+L N +KAN +  E K   L+     
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217

Query: 297 --------YDGVV---NATFMDWFFNRGKEKEAMESY-KSLLDRQFKMIPATCNVLLEVL 356
                   Y+  V    ATFM+++F +GK+ EAME Y + +L  +  +   T N LL+VL
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNALLKVL 277

Query: 357 LRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 416
           L++G+K  AW L+ ++LD +       ++SDT  IMV+ECF +G FSEA+ET++K   +P
Sbjct: 278 LKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFDMGWFSEAMETYKK--ARP 337

Query: 417 KSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSKSLS-PDVPTHRTLIESYLKIGQ 473
           K+     D      II RFCE  M+++AE+ F +  +      DV T++T+I++Y+K G+
Sbjct: 338 KN-----DYLSDKYIITRFCENRMLSEAESVFVDSLADDFGYIDVNTYKTMIDAYVKAGR 397

[Close]

BLAST of CcUC10G192650 vs. TAIR 10
Match: AT5G28380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-47
Identity = 112/322 (34.78%), Postives = 177/322 (54.97%), Query Frame = 0


Query: 162 YSDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTY 221
           Y +AI+LF +FFN+S  +PN++S N +I AHCD+G VD  LE+YRHI+ +   +P   TY
Sbjct: 88  YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147

Query: 222 RHLTKGLIDSGKIGEAVDLLREMLNKGHGADSLVFNNLISGFLNLENLEKANELFDELK- 281
           R LTK L+ + ++ EA D++R M       D  V++ LI GFL+     +A+++F+ELK 
Sbjct: 148 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 207

Query: 282 -------ERCLVYDGVVNATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVL 341
                          + N +FMD++F +GK++EAME + +L   +  +   + N +L+ L
Sbjct: 208 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVLKCL 267

Query: 342 LRHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 401
           + HG+KTEAW LF  M+        +  +S+T  I+++   K G F E    F +V    
Sbjct: 268 VEHGRKTEAWELFLDMI--------EICDSETVGIIMS---KEGFFGEKTIPFERVRR-- 327

Query: 402 KSRPFAMDVAGYNNIIARFCEQGMMTDAETFFAELCSK------SLSPDVPTHRTLIESY 461
                      Y  +IA  C+QG M +AE  FA++ +          PDV T R +I  Y
Sbjct: 328 ---------TCYTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMINGY 382

Query: 462 LKIGQIDDVLRVFNRMVDVGLR 470
           +K+G++DD ++  N+M    LR
Sbjct: 388 VKVGRVDDAIKTLNKMKISNLR 382

The following BLAST results are available for this feature:

BLAST of CcUC10G192650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984748.1	0.0e+00	89.82	pentatricopeptide repeat-containing protein At1g10270-like isoform X2 [Cucurbita...	[more]
XP_023552663.1	0.0e+00	86.08	pentatricopeptide repeat-containing protein At1g10270-like isoform X2 [Cucurbita...	[more]
XP_022984746.1	0.0e+00	85.81	pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita...	[more]
XP_038905008.1	0.0e+00	79.36	pentatricopeptide repeat-containing protein At1g10270 [Benincasa hispida]	[more]
XP_023552661.1	0.0e+00	82.79	pentatricopeptide repeat-containing protein At1g10270-like isoform X1 [Cucurbita...	[more]

BLAST of CcUC10G192650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY69	8.0e-211	60.16	Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX...	[more]
Q9M3A8	6.8e-93	38.11	Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop...	[more]
Q9LEX6	3.2e-58	36.32	Pentatricopeptide repeat-containing protein At3g60960, mitochondrial OS=Arabidop...	[more]
Q9LEX5	1.6e-57	37.63	Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidop...	[more]
Q9SR00	8.4e-35	25.17	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]

BLAST of CcUC10G192650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBF6	0.0e+00	89.82	pentatricopeptide repeat-containing protein At1g10270-like isoform X2 OS=Cucurbi...	[more]
A0A6J1J312	0.0e+00	85.81	pentatricopeptide repeat-containing protein At1g10270-like isoform X1 OS=Cucurbi...	[more]
A0A6J1EMZ6	0.0e+00	85.54	pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata...	[more]
A0A5A7TJN2	0.0e+00	91.47	ACT11D09.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00300 PE=4...	[more]
Q6E438	0.0e+00	91.47	ACT11D09.4 OS=Cucumis melo OX=3656 GN=ACT11D09.4 PE=4 SV=1	[more]

BLAST of CcUC10G192650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10270.1	5.7e-212	60.16	glutamine-rich protein 23	[more]
AT3G49240.1	4.8e-94	38.11	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G60960.1	2.3e-59	36.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G60980.1	1.1e-58	37.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G28380.1	1.5e-47	34.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 177..200 e-value: 9.9E-7 score: 28.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 401..445 e-value: 4.6E-8 score: 33.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 365..388 e-value: 0.012 score: 15.8 coord: 509..538 e-value: 0.21 score: 11.9 coord: 325..352 e-value: 0.021 score: 15.1 coord: 219..248 e-value: 0.009 score: 16.2 coord: 255..282 e-value: 5.9E-4 score: 19.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 325..357 e-value: 6.6E-5 score: 20.8 coord: 255..287 e-value: 8.5E-4 score: 17.3 coord: 405..437 e-value: 1.2E-4 score: 20.0 coord: 183..210 e-value: 4.3E-4 score: 18.3 coord: 439..468 e-value: 8.2E-5 score: 20.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..356 score: 9.470621
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 181..216 score: 9.350046
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 506..540 score: 9.788499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 436..470 score: 10.490022
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 252..282 score: 8.977363
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 217..251 score: 9.602157
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..435 score: 9.711769
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 110..305 e-value: 1.3E-33 score: 118.8 coord: 469..574 e-value: 9.8E-9 score: 37.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 315..392 e-value: 7.4E-9 score: 37.4 coord: 393..468 e-value: 1.3E-11 score: 46.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..683
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 611..662
None	No IPR available	PANTHER	PTHR47937	PLASTID TRANSCRIPTIONALLY ACTIVE CHROMOSOME 2-LIKE PROTEIN	coord: 1..660
None	No IPR available	PANTHER	PTHR47937:SF2	PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN, PF01535'-RELATED	coord: 1..660
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 155..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G192650.1	CcUC10G192650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding