CcUC10G192330 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G192330
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	CicolChr10: 9255785 .. 9256945 (-)
RNA-Seq Expression	CcUC10G192330
Synteny	CcUC10G192330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTCCAAATTACTAGAATCCCTTATCGTTTGTGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTTAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTACCTTAAGAATATAATCGTTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTGCTGAAACAGAACCTCAAAGTCCCCACTACCACCATCTCTAAGTTCTTTGAGCTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTGTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATCGGGACGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCGTTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTCTGGTGTGAGAGACTGTTTAACAGGTGAACAAACTCTTGCACTAGAGTTACTTTCTTGGAGGAAAGACCTTTCAGTCTCTGAACTGAAGAAAAGGGAATGTCTGGAAAGCAATGTTGGGAGTAGAAACAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTCATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCCTACGAAAATGCATTCCATCTAGCACCAAATAGTGACCAGGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATTTTCTGCTTGGGAGAGTATTTGGGGTTCGGTTCTAGGTTCAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAATAAGATTAGAACACAAACTGTGGTTCTTAGAGAGGCTTATAAGAAGGACTTTTTGGTAGAAAAACACCCTTTGATGGGCATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTGTAAGGAAACCTAGACCAGGCATCCTATTAGCTTCTTCCAGAGGTAAAAGACAGAATAGTCTCTTTGCCAATAAAGAAGTTTAA

mRNA sequence

ATGATTCTCCAAATTACTAGAATCCCTTATCGTTTGTGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTTAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTACCTTAAGAATATAATCGTTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTGCTGAAACAGAACCTCAAAGTCCCCACTACCACCATCTCTAAGTTCTTTGAGCTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTGTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATCGGGACGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCGTTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTCTGGTGTGAGAGACTGTTTAACAGGTGAACAAACTCTTGCACTAGAGTTACTTTCTTGGAGGAAAGACCTTTCAGTCTCTGAACTGAAGAAAAGGGAATGTCTGGAAAGCAATGTTGGGAGTAGAAACAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTCATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCCTACGAAAATGCATTCCATCTAGCACCAAATAGTGACCAGGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATTTTCTGCTTGGGAGAGTATTTGGGGTTCGGTTCTAGGTTCAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAATAAGATTAGAACACAAACTGTGGTTCTTAGAGAGGCTTATAAGAAGGACTTTTTGGTAGAAAAACACCCTTTGATGGGCATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTGTAAGGAAACCTAGACCAGGCATCCTATTAGCTTCTTCCAGAGGTAAAAGACAGAATAGTCTCTTTGCCAATAAAGAAGTTTAA

Coding sequence (CDS)

ATGATTCTCCAAATTACTAGAATCCCTTATCGTTTGTGCCAGACTCGTGCTTTTGTTGATGCAAAGGTCAAATGGGTTAGAGATCCGTACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTACCTTAAGAATATAATCGTTTCGAGTCCTTTAAAATCTCTTCCACTTTCCTCTGTCTCTTTGCTGAAACAGAACCTCAAAGTCCCCACTACCACCATCTCTAAGTTCTTTGAGCTATACCCCTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTGTCCATCCTCATGTCAAGCTCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCAACCACATCGGGACGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTAAATGTCATTGAGAGGCTGCAATGGGATTTGGGTCTACCCTACAGGTTCGTTCCAACTCTTCTTGCTGATTATCCTGAATATTTTCAGGTTTCTGGTGTGAGAGACTGTTTAACAGGTGAACAAACTCTTGCACTAGAGTTACTTTCTTGGAGGAAAGACCTTTCAGTCTCTGAACTGAAGAAAAGGGAATGTCTGGAAAGCAATGTTGGGAGTAGAAACAGAAATCATATTGCATTTCCAATGAGTTTCCCAAGGGGTTTCGATTTGCAGAAGAAGGTCATGAATTGGGTGGAGGAGTGGCAGCGTCTGCCCTACATTTCACCCTACGAAAATGCATTCCATCTAGCACCAAATAGTGACCAGGCTGAGAAATGGGCTGTGGCAGTTCTCCATGAGTTGCTTTACCTTATGGTCTCGAAGAAAACCGAAAAAGAGAACATTTTCTGCTTGGGAGAGTATTTGGGGTTCGGTTCTAGGTTCAAGAAAGCCTTAGTTCATCACCCAGGTATATTTTATGTCTCAAATAAGATTAGAACACAAACTGTGGTTCTTAGAGAGGCTTATAAGAAGGACTTTTTGGTAGAAAAACACCCTTTGATGGGCATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTGTAAGGAAACCTAGACCAGGCATCCTATTAGCTTCTTCCAGAGGTAAAAGACAGAATAGTCTCTTTGCCAATAAAGAAGTTTAA

Protein sequence

MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVVRKPRPGILLASSRGKRQNSLFANKEV

Homology

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BLAST of CcUC10G192330 vs. NCBI nr
Match: XP_038906250.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 714.5 bits (1843), Expect = 4.8e-202
Identity = 351/383 (91.64%), Postives = 367/383 (95.82%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           M LQITRIP+R  QTRAFVDAKVKWVRDPYLDFAVQREKNL+QVI LKNIIVSSPLK LP
Sbjct: 1   MFLQITRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIVSSPLKFLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LS+VSLLKQNLK+PTTTISKFFELYPSVFIQFQPS+G HPHVKLTSQALLLHKEESTIH 
Sbjct: 61  LSNVSLLKQNLKIPTTTISKFFELYPSVFIQFQPSVGFHPHVKLTSQALLLHKEESTIHI 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL +IERLQWDLGLPYRF+PTLLADYPEYFQV  VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYIIERLQWDLGLPYRFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           D LTGEQTLALELLSWRKDLSVSELK+RECLE N+GSRNR+HIAF MSFPRGFDLQKKVM
Sbjct: 181 DYLTGEQTLALELLSWRKDLSVSELKRRECLEGNLGSRNRSHIAFRMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLM+SKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMISKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMG RHQYLHLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLIEKHPLMGTRHQYLHLMNKVV 360

Query: 361 RKPRPGILLASSRGKRQNSLFAN 384
           R+PRPGI+LASSR KR+ +LFAN
Sbjct: 361 RRPRPGIILASSRAKRRKTLFAN 383

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BLAST of CcUC10G192330 vs. NCBI nr
Match: XP_008456527.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYJ99978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 713.8 bits (1841), Expect = 8.2e-202
Identity = 349/386 (90.41%), Postives = 368/386 (95.34%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MILQITRIP+R  Q RAFVDAKVKWVRDPYLDFAVQREKNLKQVI LKNII+SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLG+HPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRF+PTLLADYP+YFQV  V+
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKRE LE N GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYL +SKKTEKENI+CLG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKEV 387
           RKPRPGI+LASSRGKR+N   ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CcUC10G192330 vs. NCBI nr
Match: XP_022136370.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 693.0 bits (1787), Expect = 1.5e-195
Identity = 337/385 (87.53%), Postives = 362/385 (94.03%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL+ TRIPYRL QTR FVDAKVKWVRDPYLDFAVQREKNL+QVI LKN+IVS+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS G+HP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+F+PTLLADYPEYFQV  VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+REC + NV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW VAVLHELLYL+VSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQY+HLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRPGI+LASSRGKRQN+ ++NKE
Sbjct: 361 RRPRPGIILASSRGKRQNNPYSNKE 385

[Close]

BLAST of CcUC10G192330 vs. NCBI nr
Match: XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 684.9 bits (1766), Expect = 4.1e-193
Identity = 332/385 (86.23%), Postives = 358/385 (92.99%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL++TR P+RLCQTRAFVDAKVKWVRDPYLDF VQREKNL+QVI LKN+IVSSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLG+HPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+F+P LLADYPEYFQV  +R
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LE N   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW  AVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+HLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRP I+LASSRGKRQN+  ANKE
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKE 385

[Close]

BLAST of CcUC10G192330 vs. NCBI nr
Match: KAG7031364.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 683.7 bits (1763), Expect = 9.1e-193
Identity = 335/385 (87.01%), Postives = 357/385 (92.73%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL +TR P+RLCQTRAFVDAKVKWVRDPYLDF VQREKNL+QVI LKN+IVSSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLG+HPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+F+PTLLADYPEYFQV  VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LE N   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW  AVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+HLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRP I+LASSR KRQN+  ANKE
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKE 385

[Close]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-52
Identity = 124/349 (35.53%), Postives = 195/349 (55.87%), Query Frame = 0


Query: 12  LCQTRAFVDAKVKWVRDPYLDFA--VQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQ 71
           L Q R +VD  +KW RDPY D    + R   LK V+ LKN IV  P + +P+S++S   +
Sbjct: 18  LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTR 77

Query: 72  NLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVV 131
              V +T I+ F   +PS+F +F       P  +LT +A  L ++E  ++  Q   DD+ 
Sbjct: 78  QFDV-STKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVY--QTSADDLR 137

Query: 132 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR--DCLTGEQ 191
            RL KL++++    LPL++++ ++W LGLP  ++      +P+    S  R  D   G +
Sbjct: 138 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----QFPDMNLDSSFRFVDMEDGVK 197

Query: 192 TLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQ 251
            LA++     K LSV +   +  ++   G  +   I FP+   +G  L+ K+ +W+ E+Q
Sbjct: 198 GLAVDYNGGDKVLSVLQ---KNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQ 257

Query: 252 RLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFK 311
           +LPY+SPY++   L P+SD AEK  V  LHELL L V    E++ + CL ++ G   +  
Sbjct: 258 KLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVH 317

Query: 312 KALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLM 357
           KA   HP IFY+S K +T T +LRE Y+    VE HP++G+R +Y+ LM
Sbjct: 318 KAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

[Close]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.6e-36
Identity = 117/357 (32.77%), Postives = 181/357 (50.70%), Query Frame = 0


Query: 19  VDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKVPTTTI 78
           V A VK  ++   D  VQR+K LK V+ ++ I+VS P + + L  +   +++L +     
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKR-- 131

Query: 79  SKFFEL---YPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKL 138
            +F  L   YP VF +           K+TS+A  L+ +E  I N     D +V +L KL
Sbjct: 132 RRFIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKL 191

Query: 139 LMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLTGEQTLALELLS 198
           +M++   ++ L  I  L+ DLGLP  F  T+   YP+YF+V      +   +  ALEL  
Sbjct: 192 VMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV------VPTPRGPALELTH 251

Query: 199 WRKDLSVSELKKRECLESNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRL 258
           W  +L+VS  +  E       S  RN I   P  F     PRG +L K     + +++ +
Sbjct: 252 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 311

Query: 259 PYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKA 318
            YISPY++  HL   + + EK A  V+HELL L   K+T  +++    E   F  + +  
Sbjct: 312 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 371

Query: 319 LVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVVRKPRPG 367
           L+ HP +FYVS K    +V LREAY+   L++K PL  ++ +   L++ V R PR G
Sbjct: 372 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVS-VPRFPRRG 416

[Close]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-34
Identity = 118/388 (30.41%), Postives = 190/388 (48.97%), Query Frame = 0


Query: 9   PYRLCQTRAFV--DAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSL 68
           P RL    A V   A VK  ++   D  +QR+K LK V+ L+NI+V+ P + + L  +  
Sbjct: 39  PLRLRPRPAAVVAQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGR 98

Query: 69  LKQNLKVP-TTTISKFFELYPSVFIQFQPSLGVHP-HVKLTSQALLLHKEESTIHNSQPH 128
            +++L +     +      +P VF   +   GV+    +LT  A  L+ +E  + N    
Sbjct: 99  FRRDLGLTRKRRLIALLRRFPGVFDVVEE--GVYSLRFRLTPAAERLYLDELRLRNES-- 158

Query: 129 RDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLT 188
               V +L KLLM++   ++ +  +  L+ DLGLP  F  T+   YP+YF+V      + 
Sbjct: 159 EGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV------VR 218

Query: 189 GEQTLALELLSWRKDLSVS--ELKKRECLESNVGSRNRNHIAFPMSF-----PRGFDLQK 248
            ++  ALEL  W  +L+VS  EL + E        RN   I  P+ F     P+G  L +
Sbjct: 219 MDRGPALELTHWDPELAVSAAELAEEESRAREAEERNL-IIDRPLKFNRVRLPKGLKLTR 278

Query: 249 KVMNWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLG 308
                +  ++ +PYISPY +  HL   SD+ EK A  V+HE+L L V K+T  +++    
Sbjct: 279 GEARRIARFKEMPYISPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFR 338

Query: 309 EYLGFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMN 368
           E   F    +  ++ HP +FYVS K    +V LREAYK   LVEK+ L+ ++ + +  + 
Sbjct: 339 EEFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK-MRALV 398

Query: 369 KVVRKPRPGILLASSRGKRQNSLFANKE 386
            V R PR   +      +  N    +++
Sbjct: 399 AVPRFPRRAAVGTGEEAEGMNGSLQSRD 414

[Close]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.4e-34
Identity = 115/366 (31.42%), Postives = 183/366 (50.00%), Query Frame = 0


Query: 21  AKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K LK V+ L+NI+VS+P + + L  +   +++L +     + 
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 81  KFFELYPSVFIQFQPSLGVHP-HVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLML 140
              + +P VF   +   GV+    +LT  A  L+ +E  +H         V +L KLLM+
Sbjct: 119 ALLKRFPGVFEVVEE--GVYSLRFRLTPAAERLYLDE--LHLKNESEGLAVTKLRKLLMM 178

Query: 141 TGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLTGEQTLALELLSWRK 200
           +   ++ +  I  L+ DLGLP  F  T+   YP+YF+V      +  ++   LEL  W  
Sbjct: 179 SQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV------VQMDRGPGLELTHWDP 238

Query: 201 DLSVSELKKRECLESNVGSRNRNHIA-FPMSF-----PRGFDLQKKVMNWVEEWQRLPYI 260
           +L+VS  +  E        + RN I   P+ F     P+G  L +     V +++ +PYI
Sbjct: 239 ELAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYI 298

Query: 261 SPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKALVH 320
           SPY +  HL   S + EK A  V+HE+L L + K+T  +++    E   F    +  L+ 
Sbjct: 299 SPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIR 358

Query: 321 HPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVVRKPRPGILLASS 379
           HP +FYVS K    +V LREAYK   LVEK  L+ ++ + +  +  V R PR G+   S 
Sbjct: 359 HPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEK-MRALVAVPRFPRRGVPATSE 413

[Close]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 9.6e-28
Identity = 101/354 (28.53%), Postives = 177/354 (50.00%), Query Frame = 0


Query: 26  VRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKV--PTTTISKFFE 85
           VRD   D  ++ EK +++V+   ++I+S P  ++ +S +  L + L +         F  
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 86  LYPSVFIQFQPSLGVHPHVKLTSQAL--LLHKEESTIHNSQPHRDDVVKRLAKLLMLTGA 145
            +P VF  ++  +    + +LT +AL  + H+ E+ +        D V RL KL+M++  
Sbjct: 107 KFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI----PDAVTRLRKLVMMSNT 166

Query: 146 GKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLTGEQT--LALELLSWRKD 205
           G++ L  +   + + GLP  F  +++  +P++F++      + GE+T    +E++    +
Sbjct: 167 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL------IDGEETRDKYIEIVEKDPN 226

Query: 206 LSVSELKKRECLESNVGSRNRNHI--AFPMSFPRGFDLQKKVMNWVEEWQRLPYISPYEN 265
           LS+  +++   +E      +   +  +F ++FP GF + K     V +WQRLPY SPYE+
Sbjct: 227 LSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYED 286

Query: 266 AFHLAPNSDQA----EKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKALVHH 325
                  S +A    EK +VA +HELL L V KK   E I      +    + K+ L+ H
Sbjct: 287 ISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQH 346

Query: 326 PGIFYVS---NKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVVRKPR 365
            GIFY+S   N  +  TV LRE YK+  LVE + +   R +   L+    RK +
Sbjct: 347 QGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390

[Close]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL
Match: A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.0e-202
Identity = 349/386 (90.41%), Postives = 368/386 (95.34%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MILQITRIP+R  Q RAFVDAKVKWVRDPYLDFAVQREKNLKQVI LKNII+SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLG+HPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRF+PTLLADYP+YFQV  V+
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKRE LE N GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYL +SKKTEKENI+CLG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKEV 387
           RKPRPGI+LASSRGKR+N   ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL
Match: A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.0e-202
Identity = 349/386 (90.41%), Postives = 368/386 (95.34%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MILQITRIP+R  Q RAFVDAKVKWVRDPYLDFAVQREKNLKQVI LKNII+SSPL S+P
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLG+HPHVK+TSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           S+PHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPYRF+PTLLADYP+YFQV  V+
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDL+VSELKKRE LE N GSR RN IAFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYL +SKKTEKENI+CLG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKV+
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKEV 387
           RKPRPGI+LASSRGKR+N   ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.3e-196
Identity = 337/385 (87.53%), Postives = 362/385 (94.03%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL+ TRIPYRL QTR FVDAKVKWVRDPYLDFAVQREKNL+QVI LKN+IVS+P KSLP
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSLLKQNLKVPTTT+SKFF+LYPSVF QFQPS G+HP VKLT QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDDVVKRLAKLLMLTGAG+LPL VIERLQWDLGLPY+F+PTLLADYPEYFQV  VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+LS+SELK+REC + NV SR  NHIAFPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW VAVLHELLYL+VSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQY+HLMNKVV
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRPGI+LASSRGKRQN+ ++NKE
Sbjct: 361 RRPRPGIILASSRGKRQNNPYSNKE 385

[Close]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.0e-193
Identity = 332/385 (86.23%), Postives = 358/385 (92.99%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL++TR P+RLCQTRAFVDAKVKWVRDPYLDF VQREKNL+QVI LKN+IVSSP KS+P
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLK PTT+ISKFF+LYPSVFIQFQPSLG+HPHVKLTSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDD+VKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+F+P LLADYPEYFQV  +R
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LE N   RN NHIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW  AVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+HLMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRP I+LASSRGKRQN+  ANKE
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKE 385

[Close]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL
Match: A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 9.2e-191
Identity = 332/385 (86.23%), Postives = 355/385 (92.21%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           MIL +TR P+RLCQTRAFVDAKVKWVRDPYLDF VQRE+NL+QVI LKN+IVSSP KS+P
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHN 120
           LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLG+HPHVKLTSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR 180
           SQPHRDDVVKRLAKLLMLTGAGKLPL VIE+LQWDLGLPY+F+PTLLADYPEYFQV  VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DLSVSELKKR  LE N   RN  HIAFPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYL 300
           NWVEEWQRLPYISPYENAFHLAPNSDQAEKW  AVLHELLYLMVSKKTEKENI CLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300

Query: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVV 360
           GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+ LMNK V
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360

Query: 361 RKPRPGILLASSRGKRQNSLFANKE 386
           R+PRP I+LASSR KRQN+  ANKE
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKE 385

[Close]

BLAST of CcUC10G192330 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 448.0 bits (1151), Expect = 7.8e-126
Identity = 232/379 (61.21%), Postives = 284/379 (74.93%), Query Frame = 0


Query: 1   MILQITRIPYRLCQTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLP 60
           M    T++   L Q R FV+A+VKWV D YLD AVQREKNLKQVI LK+ IVSSP KSLP
Sbjct: 1   MAAATTKLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLP 60

Query: 61  LSSVSLLKQ--NLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTI 120
           LSS+SLLK   NL +   T + FF+ YPSVF  FQPS     HV+LT QAL LHKEE TI
Sbjct: 61  LSSLSLLKPLVNLHI---TAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETI 120

Query: 121 HNSQPHRDDVVKRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSG 180
           H S P R+  V+RL K LMLTGAG LPL V++R ++DLGLP  ++ +L+ DYPEYF+V+ 
Sbjct: 121 HLSPPQRNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTE 180

Query: 181 VRDCLTGEQTLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKK 240
           ++D LTGE+TLAL + S R +L VSE+++RE        +    I + M+FP+G++L K+
Sbjct: 181 IKDRLTGEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKR 240

Query: 241 VMNWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGE 300
           V NWVE+WQ LPYISPYENAFHL   SDQAEKWAVAVLHELL+L+VSKKTE +N+ CLGE
Sbjct: 241 VKNWVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGE 300

Query: 301 YLGFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNK 360
           YLGFG RFKKALVHHPGIFY+S+KIRTQTVVLREAY K FL+EKHPLMG+RHQY++LM+K
Sbjct: 301 YLGFGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSK 360

Query: 361 VVRKPRPGILLASSRGKRQ 378
             R  +   +    R  R+
Sbjct: 361 SGRGKKRDYVHGVERSNRK 376

[Close]

BLAST of CcUC10G192330 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 308.5 bits (789), Expect = 7.4e-84
Identity = 156/344 (45.35%), Postives = 234/344 (68.02%), Query Frame = 0


Query: 19  VDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKVPTTTI 78
           V+   K+VRD  LD AV+REKNL+ ++ +K++I S P KS+P+S ++  K +L+VP   I
Sbjct: 25  VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPI 84

Query: 79  SKFFELYPSVFIQFQP-SLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKLLM 138
            +F   +PSVF +F P  +G+HPH+ LT + L    +E  ++ S+ ++  +  RL KLLM
Sbjct: 85  -EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLM 144

Query: 139 LTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQV--SGVRDCLTGEQTLALELLS 198
           +    K+PL +++ L+WDLGLP  +V T++ ++P+YF+V  S +R C +GE    LEL+ 
Sbjct: 145 INRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGC-SGE----LELVC 204

Query: 199 WRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQRLPYISPY 258
           W  + +VS L+K+            + IAFPM F  GF + KK+  W+++WQ+LPYISPY
Sbjct: 205 WSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPY 264

Query: 259 ENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKALVHHPG 318
           ENA HL+  SD+++KWA AVLHE++ L VSKK EK+ I  LGE++G  SRFK+ L +HPG
Sbjct: 265 ENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPG 324

Query: 319 IFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKV 360
           IFY+S+K+RT TVVLR+ YK+  L+E + L+  R++Y+ LMN V
Sbjct: 325 IFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV 362

[Close]

BLAST of CcUC10G192330 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 248.8 bits (634), Expect = 7.0e-66
Identity = 150/376 (39.89%), Postives = 223/376 (59.31%), Query Frame = 0


Query: 14  QTRAFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKV 73
           Q    V+ K+KWV+D  LD  V REK+L+ V  L ++I +SP   LP+  +   +  L +
Sbjct: 28  QRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGL 87

Query: 74  P-TTTISKFFELYPSVFIQ--FQPSLGVH-PHVKLTSQALLLHKEESTIHNSQPHRDDVV 133
           P    +S F   YP++F++  +  S G   P   LT + + L+ EE  +  S+ +  DV+
Sbjct: 88  PQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERDVL 147

Query: 134 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVRDCLTGEQTL 193
            RL KLLMLT    L L+ I+ L+WDLGLPY +  +L+  +P+ F +  +   L G    
Sbjct: 148 VRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG---- 207

Query: 194 ALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQRL 253
            L+L+ W + L+VS+++ RE    +VG  N   +AFP+ F RGF L++K + W++EWQRL
Sbjct: 208 -LKLIHWDEHLAVSQMQLRE----DVG--NDERMAFPVKFTRGFGLKRKSIEWLQEWQRL 267

Query: 254 PYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKA 313
           PY SPY +A HL P +D +EK  V V HELL+L + KKTE++N+  L +      +F K 
Sbjct: 268 PYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKV 327

Query: 314 LVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVVRKPRPGILL 373
              HPGIFY+S K  TQTV+LREAY +  L+EKHPL+ +R ++ ++MN+          L
Sbjct: 328 FERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEG--------FL 382

Query: 374 ASSRGKRQNSLFANKE 386
             SRG  Q S+ A+ E
Sbjct: 388 DRSRGLYQKSVEADLE 382

[Close]

BLAST of CcUC10G192330 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 219.2 bits (557), Expect = 5.9e-57
Identity = 131/354 (37.01%), Postives = 199/354 (56.21%), Query Frame = 0


Query: 17  AFVDAKVKWVRDPYLDFAVQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQNLKVPTT 76
           A    ++KWV++  LD  +  E +LK    LK+ I  SP   L   SV+  ++ L + T 
Sbjct: 27  AMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGL-TV 86

Query: 77  TISKFFELYPSVFIQF-QPSLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVVKRLAKL 136
            + +F   YP++F +F        P  KLT  AL+L  +E  IH  Q H  D V+RL ++
Sbjct: 87  PVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIH--QSHEADTVERLCRV 146

Query: 137 LMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYF---QVSGVRDCLTGEQTLALE 196
           LM+  +  + L  +  L++DLGLP  +  TL+  YP++F   + S    C        L+
Sbjct: 147 LMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPC--------LK 206

Query: 197 LLSWRKDLSVSELKKRECLESNVGS----------RNRNHIAFPMSFPRGFDLQKKVMNW 256
           L+ WR + + S L+KR   E N  S          R ++ + FPMSFPRG+  QKKV  W
Sbjct: 207 LVKWRDEFAFSALQKRN--EDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAW 266

Query: 257 VEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGF 316
           ++E+Q+LPYISPY++  ++ P SD  EK AVAVLHELL L + KKT++  +  +   L  
Sbjct: 267 MDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNI 326

Query: 317 GSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLM 357
             +F +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +R ++ H+M
Sbjct: 327 PHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVM 367

[Close]

BLAST of CcUC10G192330 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.3e-53
Identity = 124/349 (35.53%), Postives = 195/349 (55.87%), Query Frame = 0


Query: 12  LCQTRAFVDAKVKWVRDPYLDFA--VQREKNLKQVIYLKNIIVSSPLKSLPLSSVSLLKQ 71
           L Q R +VD  +KW RDPY D    + R   LK V+ LKN IV  P + +P+S++S   +
Sbjct: 18  LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTR 77

Query: 72  NLKVPTTTISKFFELYPSVFIQFQPSLGVHPHVKLTSQALLLHKEESTIHNSQPHRDDVV 131
              V +T I+ F   +PS+F +F       P  +LT +A  L ++E  ++  Q   DD+ 
Sbjct: 78  QFDV-STKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVY--QTSADDLR 137

Query: 132 KRLAKLLMLTGAGKLPLNVIERLQWDLGLPYRFVPTLLADYPEYFQVSGVR--DCLTGEQ 191
            RL KL++++    LPL++++ ++W LGLP  ++      +P+    S  R  D   G +
Sbjct: 138 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----QFPDMNLDSSFRFVDMEDGVK 197

Query: 192 TLALELLSWRKDLSVSELKKRECLESNVGSRNRNHIAFPMSFPRGFDLQKKVMNWVEEWQ 251
            LA++     K LSV +   +  ++   G  +   I FP+   +G  L+ K+ +W+ E+Q
Sbjct: 198 GLAVDYNGGDKVLSVLQ---KNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQ 257

Query: 252 RLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFK 311
           +LPY+SPY++   L P+SD AEK  V  LHELL L V    E++ + CL ++ G   +  
Sbjct: 258 KLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVH 317

Query: 312 KALVHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLM 357
           KA   HP IFY+S K +T T +LRE Y+    VE HP++G+R +Y+ LM
Sbjct: 318 KAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLM 355

The following BLAST results are available for this feature:

BLAST of CcUC10G192330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906250.1	4.8e-202	91.64	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida]	[more]
XP_008456527.1	8.2e-202	90.41	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 prot...	[more]
XP_022136370.1	1.5e-195	87.53	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]
XP_022994938.1	4.1e-193	86.23	protein WHAT'S THIS FACTOR 1 [Cucurbita maxima]	[more]
KAG7031364.1	9.1e-193	87.01	Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of CcUC10G192330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	3.3e-52	35.53	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
A0MFS5	9.6e-36	32.77	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
B6TTV8	1.8e-34	30.41	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	2.4e-34	31.42	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q689D6	9.6e-28	28.53	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of CcUC10G192330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0U1	4.0e-202	90.41	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C4Q9	4.0e-202	90.41	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4...	[more]
A0A6J1C3P8	7.3e-196	87.53	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080...	[more]
A0A6J1K6G9	2.0e-193	86.23	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV...	[more]
A0A6J1FNW3	9.2e-191	86.23	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ...	[more]

BLAST of CcUC10G192330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24320.1	7.8e-126	61.21	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G71850.1	7.4e-84	45.35	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	7.0e-66	39.89	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	5.9e-57	37.01	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G39120.1	2.3e-53	35.53	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 26..358 e-value: 7.9E-112 score: 373.4
None	No IPR available	PANTHER	PTHR31476:SF19	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 3..368
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 3..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G192330.1	CcUC10G192330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding