CcUC10G191420 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G191420
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr10: 6767874 .. 6772689 (-)
RNA-Seq Expression	CcUC10G191420
Synteny	CcUC10G191420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGTTATTCGTGAGAAATGAAAGTCGGCAATCTCGGGTATAAATATGTGAATTCTCGAGCCTCAATTTTCCATACAGACACGAATAATTGGAAAGTTATTCTCATCGCGACTAATTTTAATTTCGAAATTTGCTCTTCTTCAGCCGTCTTAAGGTTTCAATCTTTTATCTGTCTCTCATCTGTTTTTCAGATTGATTTGGATTTCTCTCCTAGTTCGATTTATTGATGTTTGAGTTTTCGTGAAACGATTTGTAGTGTTTGTAATTGTCCTACCTGTTCGATAATTTAGAGCGATTCTTAATCGGGGTGTCCGTCGTTGTTCTGTGGTTCGGATGAATGATCTGATGATATCGACTTTGCTTTGTTTTGCTCCGATTCATATGAATTTCGTACACTTCTTTCTGTGTTGTGATCATCATGATCTAATTATTTTCTCGAGATTTGTAATTTTATGATTACCCATTCTGTCGTATGGTGGTTCTTGGTCTTTCATATACGTGTATCGAATCTGTTCACCAGAATTATGTTTGTTCGACAGCTGTCTTCCATGACTCGATTTAGATGCCTTGTAGGAAAAATACGATTTGGTATCTGAGTAATTATTTCTTCGGAGATTATTGCATGATTTACATTCCTTTGCTAATTGTTTGTGTTTACTTAGGGCTCTGACATCATCTTCTTTCTGTGTTGTGAATATCATGGTTTATATCTCTCTTTTCTCAAGATTTTTTAATTTTATGGTGGTTCTTGGTCTTTCATTATATACATGTGTTGGGTATACTTATCAAAATTTTGTTTTTTCGACGAACGTCTTCCAAGACGATAATTTCGATTTAGATGCAGTGTAGGAAATATGATTTGGTGTCTGAGTGATCTTTTTTCCCGGAGTATTCATGTTTTACATCCGATTGTTAATTGATTTTTGTTTAATCGGTGTTATGACAGATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTTGAAAGTTCTGATACTATTGACAATGTAAAGGCCAAAATTCAGGATAAAGAAGGAATTCCTCCAGACCAGCAGAGGCTTATTTTCGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTATAACATACAAAAAGAATCAACCCTACATTTGGTGCTCCGTTTACGCGGTGGAATGCAAATCTTCGTGAAAACCCTCACCGGTAAAACCATCACCTTAGAGGTGGAAAGCTCCGATACCATCGATAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATCCCCCCGGACCAGCAGAGACTAATCTTCGCTGGTAAACAACTTGAAGATGGCCGTACTTTGGCGGACTACAACATTCAGAAGGAATCAACATTGCATTTGGTGCTCCGTCTTCGTGGTGGAATGCAAATTTTTGTCAAAACGCTTACGGGGAAGACTATTACACTAGAGGTTGAAAGCTCAGACACAATCGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCCCCGGATCAGCAAAGGTTGATCTTCGCAGGCAAGCAGCTCGAAGATGGACGGACACTAGCCGACTACAATATCCAAAAGGAGTCCACTCTTCACCTTGTGCTGCGTCTTCGCGGTGGAATGCAAATTTTTGTGAAGACCTTAACCGGAAAAACAATTACTTTGGAAGTTGAGAGTTCAGATACTATCGACAACGTTAAAGCTAAGATTCAAGATAAAGAAGGGATCCCACCAGACCAACAAAGGTTAATTTTCGCTGGGAAGCAATTGGAGGATGGCAGGACTCTAGCCGACTATAATATTCAAAAGGAATCGACTCTCCACTTGGTGCTGCGTCTTCGTGGAGGGATGCAAATATTTGTGAAGACCTTAACAGGAAAGACCATAACGTTGGAGGTTGAGAGCTCAGACACTATTGACAACGTGAAGGCTAAAATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAAAGGTTGATTTTCGCTGGAAAACAATTGGAGGATGGACGTACATTGGCCGATTACAACATTCAAAAGGAGTCCACCCTCCACCTTGTCCTTCGCCTTCGTGGTGGCCTTTACTGATCTCTGGACTTCGGTATAATACTCAGTATCTGTCATCATGTCTATTATGTCTGCTTATGCTTCCTCTCTCTTAATCTTGCTCATATTCTAGTCTATGTTTATGTTCTCTGTTCTAGAACCCAGTTTACAAATAATAATATATTCTATCTTCTTCGTTCCGGTTTATTATTATTCTCATCTGTGATGTATATTCGTTTTTAAAGCAAGTTGCACACAAAAAACTGTTTATCGAGTGATGGCTGAATTCACTAATCTTTATTTATTGAAACATAAGACCAAAGCACACGACGATGTACTACTCTTCTGTTATTTTTTTGGGTGGTGCGTAGTTTAAGCGCTTAGAAGTAGCATTGTTGTGGGCGCATTCCACACATGGATGGCAAGTTTCTAGCTCTCTGAAGCATCTGCCTTCCTTCTTCGCCTCGTGCTCTCCTCTGCTCCTCCATAGCAATTTCCTCCAGCAGTTCGCACCTGCATTCCTCATCCACATTCCTCAGCTCATTGCAGCACTCTTCAAAGGCACGTCCTTCTCTCCTTCTTTGGTTGTCAATTCCGCGCATCTGCAAAACATACCTGCTCTGCTGCGACAGATACTGGGCACAGCTGCCGATCTCCTCGTGTGCCCTCATCTGGCGGCACCTCTCCTGCTGCCTTTGGTTGTCATCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGGGCGTAGGCATCTGCAACCAGCAAAGCCACCGCCAAGAAGGCAATGATACTTGTGAGTCTCGTCATTGTTGAAGATTATGAGATGTGGGGAAGGAGTGCGTTTGAAGGAATGGAGTGATTAAGAGTTGGGCGAGGTGGTTGTATTTATAGGAAGTTGTTGTCGGGTGCATGTAGGGAACGTGGAAAGAGGGACTCTGTTGTGGGTTTTGTTGGAGTTGTGAGTTTTGGTTGAGCTCCCACGTATGGAGTATACATGCAAATGAGAAGCCATATGTGTCATTGAAACTGTAATTGAAGTGGGATTTTGGATGCAAATGGCTAATTTGGGGTGGGTACGTGGTGGTCTTGGAGCAAGTATCATCTTGCAAGAGCCAGCATGTGAACTCGGTTTCTTTGCTGTTGAGAAGTTGTTCAATATTCTACTGATACTGACGTTGGGGCTATCTGTTTCTCTCAACTTGTGTGTGTGTGCGCAAGGAGGTGGCTTTTGTAAAAATTACTTCCACAATATTTGGATTTAGTGCTTTAAATGTGGTAAGATTTAAGAAGATACTCTATTAATACAGTTTGAAATAACCGTTGAGTCACTTGATTTTGATCCTCATGTTGAATAGAGAGCAGTGGAAGCATTTCAATAGATACGACCTTACTTAAATAGATAGGATCTAAGGAAGCACTTCAATGGAAACATACACATGGTAGCACATCTAAGTCTATCGTATACAAAAGGGAGTAAGGAGAAATTTTATTTTTTTCTTTTGAACCAGACTCATTAATTTGAAGAAAACAAATAAATTTGTTTTGAAAAGCTCTATTAAAAAGTTCTGATTTAATTTGAAAAAAATAAGGGTTTGTTCGTACAAAATTTAAAAAGTAATTTAATCTATTTACAAGTATGATTTATGTTAGAAAATTTATATAATTGTTGTTTTCTAATATGAAAAAAATATTATTTTGTTTTCTTAATTTTTAAAAATGGTTGCGTTTAGTCCTTAACGTCTTCGATATATAAATTTAATAAATTTAAAAAATGAACTTGGGTAGTTATATGATGTGACAGGATGATTTAGAAAATATATAATTTTTTAATATTGGCCAACTTTCACTCTTCTTTCTCTTCTCTTTTTTCTCCTTTTACCTGTTCTCCCTTCTCCTCCATCTCCATCTTCCCCCTTGTTCAATATGATTCCTTCTTCCTCATCTTCTTCTTCTCCTCCTCCTCAGTCGCCACCTTTCTATTTCCCTTCTTTGATTGCTTTTACTTTTTCCACTTTTCATTGTTTATTCTACTTTTTTTTTTTTTTTTGTCTATTTGCGGTTTCCGTTATCACTGTGATTGTCTTTATTATTTTTGCAGTTTCTTTTCTGGGTTTCCTTTGTTTGAAGCCTTGACTTTGATCGTATGTGGGAGGTGTCGAAGGGGGCAGTGAAGGAAGCAATTAGGAGGGTAGAGAAAAGCCAAGTGCCAAAGTGTTTGAAGGGGGTGAAGTTTACTAATCTATCATTATCATCATTTAGGGATAGGTCAAGAGTGGAGGTGGATGAGAAGGTTATGTACCTTAAGAGTTTGATAAGGAGTTGTACTGGTAAAGGGGTTATTTTGTATGTAGGGGATATTAAACGAACTATAGATTGTAGAGAAAATTATTCAAGTAGCAATCAAACAAGGGGGTATTATTGTCCAGTGAAGCATATGATTATGGGGTTGGGGGAATTAGCATATGGGAATTGTGTGGGAGATCATCATCAACAAGAAAAAGGAGTAGTTTGGATAATGGGAATTGCAACTTTCCAAACTTACATGAGATGCAAAACTGGAAACCCATTTATTTGGAAACTCTATTTGTTATTCATTCTCTCACCATTGCCATAAAAATGCAATCGAATAAGGGAAATAGAAGGAAGAAATTTGAGGACACAAAGAAAGAATCAAACTGAGTTGTCGGGCATTCTCGGCCACCGGTGGTTTCTTGATCACGACCAGCTAAAGTTAAAGTTATATTAAAGAGCGTTTCCACAC

mRNA sequence

ATGGTATTTAAGCGCTTAGAAGTAGCATTGTTGTGGGCGCATTCCACACATGGATGGCAAGTTTCTAGCTCTCTGAAGCATCTGCCTTCCTTCTTCGCCTCGTGCTCTCCTCTGCTCCTCCATAGCAATTTCCTCCAGCAGTTCGCACCTGCATTCCTCATCCACATTCCTCAGCTCATTGCAGCACTCTTCAAAGGCACGTCCTTCTCTCCTTCTTTGGTTGTCAATTCCGCGCATCTGCAAAACATACCTGCTCTGCTGCGACAGATACTGGGCACAGCTGCCGATCTCCTCGTGTGCCCTCATCTGGCGGCACCTCTCCTGCTGCCTTTGGTTGTCATCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGGGCGTAGGCATCTGCAACCAGCAAAGCCACCGCCAAGAAGGCAATGATACTTGTGAGTCTCGTCATTGTTGAAGATTATGAGATGTGGGGAAGGAGTGCGTTTGAAGGAATGGAGTGATTAAGAGTTGGGCGAGGTGGTTGTATTTATAGGAAGTTGTTGTCGGGTGCATGTAGGGAACGTGGAAAGAGGGACTCTGTTGTGGGTTTTGTTGGAGTTGTGAGTTTTGGTTGAGCTCCCACGTATGGAGTATACATGCAAATGAGAAGCCATATGTGTCATTGAAACTGTAATTGAAGTGGGATTTTGGATGCAAATGGCTAATTTGGGGTGGGTACGTGGTGGTCTTGGAGCAAGTATCATCTTGCAAGAGCCAGCATGTGAACTCGGTTTCTTTGCTGTTGAGAAGTTGTTCAATATTCTACTGATACTGACGTTGGGGCTATCTGTTTCTCTCAACTTGTGTGTGTGTGCGCAAGGAGGTGGCTTTTGTAAAAATTACTTCCACAATATTTGGATTTAGTGCTTTAAATGTGTTTCTTTTCTGGGTTTCCTTTGTTTGAAGCCTTGACTTTGATCGTATGTGGGAGGTGTCGAAGGGGGCAGTGAAGGAAGCAATTAGGAGGGTAGAGAAAAGCCAAGTGCCAAAGTGTTTGAAGGGGGTGAAGTTTACTAATCTATCATTATCATCATTTAGGGATAGGTCAAGAGTGGAGGTGGATGAGAAGGTTATGTACCTTAAGAGTTTGATAAGGAGTTGTACTGGTAAAGGGGTTATTTTGTATGTAGGGGATATTAAACGAACTATAGATTGTAGAGAAAATTATTCAAGTAGCAATCAAACAAGGGGGTATTATTGTCCAGTGAAGCATATGATTATGGGGTTGGGGGAATTAGCATATGGGAATTGTGTGGGAGATCATCATCAACAAGAAAAAGGAGTAGTTTGGATAATGGGAATTGCAACTTTCCAAACTTACATGAGATGCAAAACTGGAAACCCATTTATTTGGAAACTCTATTTGTTATTCATTCTCTCACCATTGCCATAAAAATGCAATCGAATAAGGGAAATAGAAGGAAGAAATTTGAGGACACAAAGAAAGAATCAAACTGAGTTGTCGGGCATTCTCGGCCACCGGTGGTTTCTTGATCACGACCAGCTAAAGTTAAAGTTATATTAAAGAGCGTTTCCACAC

Coding sequence (CDS)

ATGGTATTTAAGCGCTTAGAAGTAGCATTGTTGTGGGCGCATTCCACACATGGATGGCAAGTTTCTAGCTCTCTGAAGCATCTGCCTTCCTTCTTCGCCTCGTGCTCTCCTCTGCTCCTCCATAGCAATTTCCTCCAGCAGTTCGCACCTGCATTCCTCATCCACATTCCTCAGCTCATTGCAGCACTCTTCAAAGGCACGTCCTTCTCTCCTTCTTTGGTTGTCAATTCCGCGCATCTGCAAAACATACCTGCTCTGCTGCGACAGATACTGGGCACAGCTGCCGATCTCCTCGTGTGCCCTCATCTGGCGGCACCTCTCCTGCTGCCTTTGGTTGTCATCGTCCACTTCGACGGTGGTGATGGTGGTGCGGTGGGCGTAGGCATCTGCAACCAGCAAAGCCACCGCCAAGAAGGCAATGATACTTGTGAGTCTCGTCATTGTTGA

Protein sequence

MVFKRLEVALLWAHSTHGWQVSSSLKHLPSFFASCSPLLLHSNFLQQFAPAFLIHIPQLIAALFKGTSFSPSLVVNSAHLQNIPALLRQILGTAADLLVCPHLAAPLLLPLVVIVHFDGGDGGAVGVGICNQQSHRQEGNDTCESRHC

Homology

[Close]

BLAST of CcUC10G191420 vs. NCBI nr
Match: KAE8650142.1 (hypothetical protein Csa_011742 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 58  QLIAALFKGTSFSPSLVVNSAHLQNIPALLRQILGTAADLLVCPHLAAPLLLPLVVIVHF 117
           +L  AL +  S SP LVV+S HLQNIPALLRQ+L  AADLL  PHL APL  P V  VHF
Sbjct: 148 RLRGALIEELSSSPPLVVDSTHLQNIPALLRQVLPAAADLLARPHLTAPLHPPWVFFVHF 207

Query: 118 DGGDGGAVGVGICNQQSHRQEGND 142
           DGGDGGA  V ICN QS RQEGND
Sbjct: 208 DGGDGGA--VSICNHQSQRQEGND 229

The following BLAST results are available for this feature:

BLAST of CcUC10G191420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650142.1	3.3e-18	67.86	hypothetical protein Csa_011742 [Cucumis sativus]	[more]

BLAST of CcUC10G191420 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G191420 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G191420 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G191420.1	CcUC10G191420.1	mRNA