CcUC10G188970 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC10G188970
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr10: 3695439 .. 3700780 (+)
RNA-Seq ExpressionCcUC10G188970
SyntenyCcUC10G188970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTCTTCCAACCTTCCCAATTCAGTTTTAAGCTCTCCCCAAGTTTCTTCTATATTTAGAATATGACCATATAACTTTTCCTTTATTAGGAGACTTCTTTTTCTGATTTAGGAGCCATGAGAAGAATTTAGAGATATCCTGATGACACTCGACAACGTTTTTAAAGGTCGTCGTCGAGAAAAAATGAAATATGTTGATGAAGCGTCGGCGGAAAGAAGGATATGACGATGTGTAGGTCGACAAAGAAAAGCTCCAAGGAAAGAGGAGGGCTAGCTGCAAAAGAATTTGCCTGCAGATTAATGGTAAACTACCAAAATTTAACTCTCTAGTACTAGAAAGTAAAATCGTTGTGTTTGTTGTGTGTTCAACACTATGAGTTTTTTTATTTATTTTTATTTTTATTATTATTAGTTATTTAATTTGCGTTTGAATTTAAAATTGGTTTTTGAAAATTAAGCTTATAAACACTACTTTAATCTATTAATTTTTTAAAATTTTTTTATCTACTTTTTAAGAGTGTTTTAAAAAACAAACCAAGTACTTTCTAAAACTCAAAAAAAAAAAAAAAAAAAAATATAGAAATTATTTTTGTTTTTGTTTTTTAAAATTTTGGTTTGATGAATAATTCAAGTGTTTATTTATAAAATATGAAAACGAATTACACAAGGCTACTTGTGCCAAAAAGTAATGATTCACTTGTCTACCTTTTATTTCCATAGAGATCTTCTAGCACATAGCTAAAACGACCTGTCAACAGACAAAAAGTCTTACCTTTTGGCCTTTATACAGCATGGATGGACAGGAAAAAAAAAAATAAAAAATAAAAAGCAAAGGGATGGTGCGGACTCATATTAGAGTCTTGATATAGTATTAAATTTGTCATAACTTATCAACTTAAGTTTTTAGGTTTATTGGTAATTTAACATGTGGTATCAGAGCAAGTTTTAAGTTCCAAACTCCGTTAAAATCATTCTCTCTCCAAATAATATTGAATCCCACTTGTTGGGTTTTAAACAAATTTTCAAGCTCACAAGCGAATAAGATTATTAGAAGTGTTGATATGATATTAAATTTAATCATAACGAACACATCAACCTTAAGCTTTTGGGTTCATTTGGTGATTTAACAATTCGAACTTTTTTTTTTTTTTACCATACATGTATATATGTAGGCCAATTAGAAAAATAGGTGAATCTAAAGGAATAGTCCACAAGTTAAAAAATAATGTCACAAACAATATATTAATAGGCATATTAGCCAATTAGAAAAAGATATAAGGAACATACAAAAGATTCGTAATCCAATTTAGTATAACCACACCTATGTCTCTGAGGGGCAGAGAACCCAATGAAAAGAACTTTACTAATAGAATTAAGCGATTGCAAAGAAATATTTATCTAATAGTGCACACAATCTAGACTCACAGAGAGTTTAGGCTCACCCTACTTTCAGTATGGTATATGTAACGTTGTTGCCCCAGTTTGAGACCGAAAGACATGACACGGTTGAGTCCCTCTCTTGATATATATTTCACGTTTACGCTCCCCCTAAACTTGAGAGTTCTTCTCTTAAAGCTATGCAATTCTTTTTATCTCATGTTTGAGACAGCCTTCAAACATGTTCGCTTAAGTTTTCCCTAAGTAATAGTTTTTCTCACTAATTGTTATATCACTCAAAAGTAGGAATAAAATGTTCATTCAACAAACAAAATAGCATAGAACCTGCAGAAGGGTTGAACAAAAACTCCTACAACGAGCACAAACTATCTCCCTTTTCCTTTTCAATCTTTTACAATTGATATCTTCAAAAGGGTTAACCCTAGGAGGACGAATAAAGATGAATATATATGATAAACAAAAAGGAACAAGGTAAAAAGTCCTTGTAATAGCATATAGACTTGTGGCATATATAGAGATTTATGGTATATAAGTGATTAGTAATTAACAATTATTTTCATTAGTATAAGGTCTTTTGAGAGGTTTCAAAAGCAAAATCATGAGAACATATGTAAAAAAAATGACACAAAAGAAGTACAAATTCATTATTTCTCAAACTTGCTCATATATATATATATATACATGCCAGTTTAATTTAATCATATATGCATGAAACAGCACATAAATTTCGATTCTATATGGATATATGTGCTTATTTTAAATACAAACTTGTTTGAGTAACATAAATATATATGTGTAAGTTTTTTTTACTAAATAAAACATTTATTCAGCTCCAATAATAGAGAGCCATTCATTAAGCTGTAGGAAAAACTCCATAGTCCATGCTTTTCAGTTCATCATTCACTTGTATATTTGGTTCCTTTAGAGTAATTTGCTTCTTCTTCTCTTCCATGATGATCATCTCGATCCGTGCTCAGCTGAGATGCGACGTATTGGTCCATGGCTCGCCAATCCATCGACTGGTTATCCAAAGCATGAAAAAATGTTTGAGACGAGGAGGGGGCATTTGCTCGGAGATCATAGGTGCACGACAAGACGTCCGGGGTCAGCTCGGGACGTCGAGGGAGCTGAGGGAAAGTGTCGTCGATCATGGCAAAGTGAAGAGGATTATCAACCTCATGCTTGCAAAGGTGAGAGATTTGATTTGGAGAATCAATGTCTGGCATGAAGGAGATTTGATCTTCCTGCCAATAAGGTGATTCATAATCACCCATCTTTTGGATTGTCGTCATTTTCTTCTTGAAAACCCTACACACCACCCATCCTTCTTCCTGATATATAGAAACGATTCATCACAATAGATTCATACATAAAAAGATGAAATAATACATCTTAATCTATTAGGTTTTTGTTTTTCGACACGTTTAACCATGGTTTAGTTTAACATTAACTAATAATTTCTAATAGTCTCTCTAAATTGGAAGGCTTTACTCTAGCTTCTCTGTTTTATTCTATTTTGATTAGCTTCTTCATTGAGCTCCTCTTTTTTAGAAAGATACGATAGGACCAAAGAATTAGTAGGCGCACCTAAATATCTCAACTAGTTAGGTTAACACATTCTTAGCACCCCTCATCATGCACCATGCCTAAATATATTAAAGCAAAAATCATCGAAGTTCTTCTCTAGCTCCTCCATGAACATAAGTTTTTGAGCAAATGAAATCACTTTTGGATTTGAGGGTATGATGAGGGTGCTAAGAAATATATGTTAACCTAATTGAAATATTCGGGTGTACCGACTGATCCCATCATCTTCTAATATATTGTCAAAAAAAAAATAATCATAATGATACTCTTGCTTAGGTAAATCACCAAGCAACTAAAAACCTTAAGCTAATAGGTTATTGTTTATAAATTCAATTATGTCAAACAGTTTACCACTACTCCTATACTCACTTGTAAGCTTAAAAGTTTATATTAATTAGAGAAAAACGACAATACAAGTGTGTGTTCAACATGGAAACTTTTGCTCTGATATCATGTAAATTTTGACAGAAACGTGTCGATATTTATAATAAGCTAATGGCTGTAAACTTGCCTGAGAAGGTCCATTTTCGGTTGTTTCGAGTCTGTATTCATGCATGATCCAATCGGACTTTAGGCCATTGGGGGCTCGTCCTCGATAGAAGACTAGGGTTTTTCTCATTCCAATTAAGCCATGGCCATGCCTTGAGTAAATAGCCTTGTCCCTTCCTGTTGCTTTCCAAAACCCTTCTTTTGTAGCTCGATTAGTTCGAGTGCTTGTTGGATACTTCTTGTCTTTGTGGCTGAAGAAGTACCAATCTTCTTGATCTTCACCTCCCATTCTGCACAATTCTGTGTACAAATATACACCATTGTTATATATTGTTGTATTGCATCACAATATAAGAAGAGATTTGAACTTGTGTATATAATTTTTTTTCTTTTTTCTTTTTGGTCAAGATATCATTTTGGTCCGTGTAAATTTGAGTTTTGCTTCATCTTAGTCCATATATACTTTCTAATGTTTAAATTTAGTCTCTATTGTTAAATCTTAAACTTAGTCCATATTGTAATTAAGCTTATTAACAAATTTCAATAAAAATTAACTTCAAATGACTAACTTTAACCTATATTGAAAGTATAGTGACTAAATTTAGACAATTAGAAGTATATGAACTAAAATAGAATGGGGCACGTTTGACCCCTCAATCTCTTGTATATTGTTCAAAAAATTTAGACAATTAAAAGTGTATGAACTAAAATAGAATGGAATCCAATGACTAATTGACTCTACAACATTTAGATGTCGGTGGCCATCATCGGTTGCTCAATTGGACCCTTGACCTTTTAGTCTTTTATCAAAGTTATACTCTCTATTTACCACTACTAGCTTCAGCTTAACTAGTTAAATCATATCCTCACATCACATTGTTTTGTACCAAAAATAAGTTGTGTGATAAAATAAATACTATATCCAAAACTAAGGCTACAATATTTATTTAAAACCCACCAATCAATCACTTGTGAATTTTAATCAACAAAAATACTTGGAATTTAGTTAAGAAAAATTCAGTTAACACACAAAAGCCATACGCCAAAAGATACATAGATGCAACGAAAAAAATAAAACTATATGCATTTTTGAAAAAAAGGGTTATCTTCAAGTATATTTAGTTTCATTTTCAGTTTAGAAACTATATGCATGTTATGTATAGAGAGAGTTGTTGGTATTCTTTTTTACTACCTTGAAGATCCCATGGCTCAATTTTGTAGAGATCAACATCTTTGATGACATCCAAATCAATTCTTTTTGAAGAAACTTTTTTCCTCAAATAATAATCTATGAGTTCTTCATCTGTTGGATGAAATCTAAAGCCTGGAGGAACATGTGGAATTGTATTCATCTTCTCCCCGAGCTGAGCTACTCCCTGCATGAACATTATTCTCATCATTCTCATCTAACTCGAACCTTAACATCATTCGTTACCTCTTGAGATAACCTCTCAACTTAAGCTTATGAGTTTAAAAGATAAAAGGGAAAAAAAGATAAATATTTTATGTGAAACCCCTAATGAGAAAGAACTAATAAGAAATCAATTGAAGAGAAGGAATCAATTTTATGGGGTTCAAACAGCTTCATTGATGAATAAAAGTACAAGAGAGAGATGGGGGGCTAGAGAAGAAAGACATCCAATTTAAAGAGATAGTTGAAGCATTGTTTTTTTTTTAACAAGATACCGAGAGAGTTGGGATCAGAGAGTGCACCGAAGTTGAAGCATCGTTATTACGAAAGAGTTTAGAACTAGAGCATACACCAAGGAAGCAAGCAGCAAGTGTGACGATATATTCTCCCAAAGAAAGAGTCTGGAGTTTTATCTTCCTTGAAGATTCCATTTGTTTCATTCAAGTCAAATGA

mRNA sequence

ATGGACGTCGGCGGAAAGAAGGATATGACGATGTGTAGGTCGACAAAGAAAAGCTCCAAGGAAAGAGGAGGGCTAGCTGCAAAAGAATTTGCCTGCAGATTAATGCTGAGATGCGACGTATTGGTCCATGGCTCGCCAATCCATCGACTGGTTATCCAAAGCATGAAAAAATGTTTGAGACGAGGAGGGGGCATTTGCTCGGAGATCATAGGTGCACGACAAGACGTCCGGGGTCAGCTCGGGACGTCGAGGGAGCTGAGGGAAAGTGTCGTCGATCATGGCAAAGTGAAGAGGATTATCAACCTCATGCTTGCAAAGGTGAGAGATTTGATTTGGAGAATCAATGTCTGGCATGAAGGAGATTTGATCTTCCTGCCAATAAGTTTAGAAACTATATGCATGTTATGTATAGAGAGAGTTGTTGATACCGAGAGAGTTGGGATCAGAGAGTGCACCGAAGTTGAAGCATCGTTATTACGAAAGAGTTTAGAACTAGAGCATACACCAAGGAAGCAAGCAGCAAGTGTGACGATATATTCTCCCAAAGAAAGAGTCTGGAGTTTTATCTTCCTTGAAGATTCCATTTGTTTCATTCAAGTCAAATGA

Coding sequence (CDS)

ATGGACGTCGGCGGAAAGAAGGATATGACGATGTGTAGGTCGACAAAGAAAAGCTCCAAGGAAAGAGGAGGGCTAGCTGCAAAAGAATTTGCCTGCAGATTAATGCTGAGATGCGACGTATTGGTCCATGGCTCGCCAATCCATCGACTGGTTATCCAAAGCATGAAAAAATGTTTGAGACGAGGAGGGGGCATTTGCTCGGAGATCATAGGTGCACGACAAGACGTCCGGGGTCAGCTCGGGACGTCGAGGGAGCTGAGGGAAAGTGTCGTCGATCATGGCAAAGTGAAGAGGATTATCAACCTCATGCTTGCAAAGGTGAGAGATTTGATTTGGAGAATCAATGTCTGGCATGAAGGAGATTTGATCTTCCTGCCAATAAGTTTAGAAACTATATGCATGTTATGTATAGAGAGAGTTGTTGATACCGAGAGAGTTGGGATCAGAGAGTGCACCGAAGTTGAAGCATCGTTATTACGAAAGAGTTTAGAACTAGAGCATACACCAAGGAAGCAAGCAGCAAGTGTGACGATATATTCTCCCAAAGAAAGAGTCTGGAGTTTTATCTTCCTTGAAGATTCCATTTGTTTCATTCAAGTCAAATGA

Protein sequence

MDVGGKKDMTMCRSTKKSSKERGGLAAKEFACRLMLRCDVLVHGSPIHRLVIQSMKKCLRRGGGICSEIIGARQDVRGQLGTSRELRESVVDHGKVKRIINLMLAKVRDLIWRINVWHEGDLIFLPISLETICMLCIERVVDTERVGIRECTEVEASLLRKSLELEHTPRKQAASVTIYSPKERVWSFIFLEDSICFIQVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC10G188970.1CcUC10G188970.1mRNA