CcUC10G188960 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G188960
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein YABBY 4-like
Location	CicolChr10: 3680821 .. 3686028 (-)
RNA-Seq Expression	CcUC10G188960
Synteny	CcUC10G188960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAGAGGGCACAAATTGTTAAATATGTCATCTTCTTCGATTCCTAACACTTTCTCTCTTCTTCCTCCTCCTCCTTCTTCTTCCGAGCAGCTTTGCTATGTCCATTGTAACATTTGCGACACGGTATTAGCGGTAAATATATCACAACTCTTTTGACATTCCTTAGGGTTTGTTGTTCTTTTTGTTTTAATTGTTAATTTGTGTTTTATTAGGTGAGTGTTCCTTGTAGTAGTTTGTTCAAAAGGGTCACCGTTCGTTGTGGCTATTGCGCCAATCTTCTGCCGGTGAACATGTGTGGTGGCATGCTTCTCCCTTCTTCAAATCAGTTTCATGGCTTTGCTCACTCAACCCCTTTTCTCTCTCCCAATACTCACAATTTCTTGGTAATTACTAACACTATGCTCTCTAATCTGATAACGTTTTCATTTATCGTTTCTAAATTTTAGACTTTGTCTTTTAATCATATCCCTGCAACTCCATTTTTGTTTAAACATAACATTAAAACAAAAAACAAAATCGTATCCGACTAAGTAAAAGGTTTATATTTATATATATTGCAAACCCTAAAAGGATTAGTGTTGTAGAACTCAAATTTAAAGTTTTGATTTTGTTGTTTTCAGGAAGAGATCTCAAATTCAAATTCAAATCCAAATCCAAATCCAAATTTTCTGATGAACCAAGCAGAAGGAATTGATTTGACCATGGCCACTCGTGTAGCTAATGATCTTCCAAGGCAGCCTCCAAGCATAAATAGACGTGAGATAATTTAATTCATTCTTCAATATATCTTTTTTTCCAAAAAAAAAAACCTTTGTTATATATAGTTTTTGTTCTGTTTTTGTGTGTTTCTTTGCGATTTTTTCATATAAAATTGGTGTCGATGGTATTTTTTTTTTCCCCTTCACATATTTTATAAATTAGAGGAACTTCTAATGATGAACAAACTCTTTAAAGTATCTATCTTTTTCCTTTTATGTTATAGAGAAAATTAATGAAGAAAGAAAAGGGAAAAAAATGCCCTTGGATAAAGCTACTTTGGGTAGGAGAGTTCACTTTCAAACCTATAACTTTTTCAGTAAAATGAATAATATGAAGGTTTTTTTTTTTTTTTTTTAATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAATATAGCTCAAGGGTAGTTCCCATTGGATAATGAGATGCATTGGTATTTTGTTGATTGAATTATTTATGAACAAAGAAGAGATTAAATACTTGGAAAGAAATTACTTAAATTACCCTAACAGGGTATAACTATAAAGCTTAAAGGAGAAAATGAATTATAGGATTGAAATCTAAGACCTTTTAGAAAAAGAAAAAAAAAAAAAAATTAGTGAACCATGTTGACTTGATACTAGAGATGGAAGGAGAAAATGATTGAATAATAGATAAATTTAAGCTTTTGCATTTTGGTGAATATACCTAACGTTTTACAAATGTTTCCAACTATCACTGAGACCTTTAACAATCAAGTGTAGCAAAATGACTTGAAAACATATGGAATGTTCAGATTCTAGTTTTCGTTCTAGGTCACTTTGACATTGTTCAAAAGTTCCAATGTTCGTCCCAATACATTCTAAGAGATTTATACTCCAAGTGTATCATCTCTAAAATGTTTATGAAAGATCAAGGACGATATTGCAACCTAGGTTTAAGAATATATATTTTTATTTTACTAAATAAGCTGTTGGTTTTTTTTTTTTTTTTTTTTTTGGAATTTGACTAAGAATTCAACTTTTTTTACTTAAGAAAGATCCAAATTATTGTAAGAAAATGAGAGAAAATAAGCTTAATTTTTAAAAAATCAAAAGCCAAAAATGCCTTCATTTAGTAACCATTTGGTTTTTGTTTTCTATTTTTTAAAATTAAGCTCATAAACACCATTTCTACTATTGGTTTCTATGTTTTGTTGTCTACCTTTTAAGAGAATTTTCAAAATCAAAACAAAAATTTAAAAACTAAAAAAAGTAATTTTCAAATTTTTTTTTTTTTAAAAGAAAAATTAGCTAAGAACTCACATGTTTACCTAGGATCAAATATGAAAACATGAAAGAAAACAAACACAATTTAAAAGAAAAAAATAAAACATAAAATAGTTATGAAACGAAAGCTAAATAATTTCCAAATGGAGTCTTACTTATTAGTGAATAATATAATTATTATGACAACACAGCTCCAGAAAAGAGACAAAGGGTGCCCTCTGCTTACAACCGATTCATCAAGTGAGTACTCATTTTTCTTCTCATTTATGGTAATTAAAAATAAATAATAATAAAACGAGCCTTATAAAATTTGCTAGTTCTCCCTAGTTTAAGATCTTCAATATGCCTCTTAAGATAGTCTAAACGTCGGTTTAAATTTTATAGGCTCTGATAACATATTATATAAAGATAAAATTCGATATGTTTGAAAAGATTATGTCTCTGATCATCTAGGGAGGAGATCCAACGGATTAAGGCTGCCAATCCAGACATATCTCATAGAGAAGCCTTCAGTGCTGCTGCTAAGAATGTAAGTAGATATATTATTTAGAGTTGTGTTGATTTTATTTCTATATTTTAAAAGATTAGCTACAATAGTTTTGTTTTCGTTTTCGTTTGATAACCAATTCGAGTTTTGTTTTCTTTATTAAGAAAAAAAAAAAAAAACTTAGGTATATTTTAGAAACTAAGAAATTCATAATTCTCTTAAAGATATATATATTGTAAGTATAGCACTAAATTGTCCGTCTTTGACAACTTAGATCCCATTTGATAACCATTATGATCTTCATTTTTTGTATTTAGAAATAAAGTTTAAATACAACTTTGTTCCCTATATTTTTGGTTTGGTTCATTTACTTTCAACTTTTGTTCATTTTTGTCATTGAACGTTAAAAAAGTAATCATTTTGTTCAATGAAGTATAAATGAAAATGAAGGGACCAGAATAGTCAATTTTTTGAAATAAAAGGATCAAAATGAACATTTTGAAAGTATAAACACGAATTAAAGTATAGGGACTAAAATGAACGTTTTAAAAATATAGGAACCAAAATGGGACCAAATGATCGAAAACAAAAAATATAGAGACCATAATAGTATTTAAACCTAATTTCTAAATACAGAAAAATAAAAAATGAAGATCATAATAGTTATCAAATGGGATCTAAGTTCTCAAACAATTTAGTGCGATACTTACAAATATATATATATATTATATTATATATCTTAAGATGATTATAAATTTCTAATGTTATCTTTAATCCAATAAGTTTAATTTGCAACATCAAATATATGCGGGTGTTCCACATAATATATATATATATATATATATATATATATATATATAGTGTAAGAAATTATTTAAAAACAAAAGGTTTCAAATGAAAAAATGCTTACAAACTTAAATATTCTAATTTTATTATATTATCTAGCATTCTTGTCTATCTTAGTTTATTTAATGAGTAAAATATAGCTGGATAACTTGGATTAATTTGATAGCAAAACTAAAAGGAAAACAATATACTTGTAAAAGAATTTGAAGTTACATTTAATTTCAAAATATTTGGTAAAGATGGATGATTAATCACAAATTCTCTCTTTTAAGCACTCTGGTGATTATGATTAGGGTTTTAATTATTATTTTTTTTTTTCCTGACATTACTGTTTTGTTATATATATATATATGTATTTTATGCATATGGTGAAAAAGTGGGCCCACTTCCCTCACATTCATTTTGGTTCTTCTTCCTGAGATATCAAACTGCCAAAAAGACAAGCATGCTTGAGAAGGTCAAACACAAACACTTTCTTTTCAACTCTTCCTATGCTTTGATGTTGGGTTTTTGTTCATGTTTAATATTCCACCATTAATTTGATGCTTTTCGATATGAAAAATACTTTCGTGCATTTTAAGTCTTAAAATATCTATCTTTGTACATTTCACTTCTAATCATATAATCTGTTAGGTGGTAAATTATTTTTAAGTAATATTTATCTTTGTACATTTCACTTCTAATCATATAATTTGTTAGGTGGTAAATTATTTTTACTTTTCTTGTCATATATTTTATTATTATTTTTAGGAATTTGATGAAAGGTGGGATGTACAGAGGGATGCACATCCCTCTTAAGTATTGGTCGTTTGATAATATGTGTGTCTTTCCTTTTGGTTTTTTTTTTAATAAGAAAATTATATTGGTTTTCTTATTATTTGAATTTTTAGTCAAGCTTAAAAAATATATAAATCAAATATTTAAAACCATCACATTTGAGTTTTTTTTTTTTATTAAGACTATGCTTGTTTTTTCACCATTTTTTTTCATCTTTTTTCTTAAGGAATGAATTCTTAGTCAAATTCCAAAAATAAAAACTACTTTTTTTTTTTTTTAAGTTTTGAAAACTCGTAAAGTTTATGAAAGACGTTGATGAAGTTCTATATACCTTGGATTGTGTTACGAATGTATGAACAATATATTAGAGAATAAATGCAAATCTTAACCTAAGTTTTTGGTATCTTTTTAACTAGTTGATGATTATTATTCACTCCTAGAATCTATACATATATTTAAATTATCATTAGATACACAAAAAGTGCGTTTATATATTTATTCCAAACATATTAGTTTAAAGTTGTGTATTAGAACTATTTTGTTTCCTCTTCGTAACTTGATTTTGTTTTCGAAAGCACTCATAAAAAATATAGATAACAAAACAAAGAAATTATTAGGTGATTCATAAATTTAATTTTCAAAAACTAAGGATCAAATATTTCTCGCTCTAAATTTGACATATTGTCATTGGGTTTGTGTAGGAAAAGGAGAAGACGTTGCGTTGAAAAATGGTCAATTTTTGAGTTCAACTAACATGGGAGCTTCCCTTTCGTATATTAATTAAGAAGGTTGAAATCTTGTTTTTAGGGCAAAAAGAAGAGAGAAATTTTGAGGTCCAAATGGGTTCCTTTGAAGATTCTCTCTTTTGATTTAAAGTGTTTAAGCCCTTTGTATTATCATTAATTATTGTGTGTTGAAGCCTACTCTATCAAGTAATTTGAGAAAAGAACATTTGTTACTCTATCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAGAGGGCACAAATTGTTAAATATGTCATCTTCTTCGATTCCTAACACTTTCTCTCTTCTTCCTCCTCCTCCTTCTTCTTCCGAGCAGCTTTGCTATGTCCATTGTAACATTTGCGACACGGTATTAGCGGTGAGTGTTCCTTGTAGTAGTTTGTTCAAAAGGGTCACCGTTCGTTGTGGCTATTGCGCCAATCTTCTGCCGGTGAACATGTGTGGTGGCATGCTTCTCCCTTCTTCAAATCAGTTTCATGGCTTTGCTCACTCAACCCCTTTTCTCTCTCCCAATACTCACAATTTCTTGGAAGAGATCTCAAATTCAAATTCAAATCCAAATCCAAATCCAAATTTTCTGATGAACCAAGCAGAAGGAATTGATTTGACCATGGCCACTCGTGTAGCTAATGATCTTCCAAGGCAGCCTCCAAGCATAAATAGACAGAAAATTAATGAAGAAAGAAAAGGGAAAAAAATGCCCTTGGATAAAGCTACTTTGGGGAGGAGATCCAACGGATTAAGGCTGCCAATCCAGACATATCTCATAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTCACATTCATTTTGGTTCTTCTTCCTGAGATATCAAACTGCCAAAAAGACAAGCATGCTTGAGAAGGAAAAGGAGAAGACGTTGCGTTGAAAAATGGTCAATTTTTGAGTTCAACTAACATGGGAGCTTCCCTTTCGTATATTAATTAAGAAGGTTGAAATCTTGTTTTTAGGGCAAAAAGAAGAGAGAAATTTTGAGGTCCAAATGGGTTCCTTTGAAGATTCTCTCTTTTGATTTAAAGTGTTTAAGCCCTTTGTATTATCATTAATTATTGTGTGTTGAAGCCTACTCTATCAAGTAATTTGAGAAAAGAACATTTGTTACTCTATCA

Coding sequence (CDS)

ATGTCATCTTCTTCGATTCCTAACACTTTCTCTCTTCTTCCTCCTCCTCCTTCTTCTTCCGAGCAGCTTTGCTATGTCCATTGTAACATTTGCGACACGGTATTAGCGGTGAGTGTTCCTTGTAGTAGTTTGTTCAAAAGGGTCACCGTTCGTTGTGGCTATTGCGCCAATCTTCTGCCGGTGAACATGTGTGGTGGCATGCTTCTCCCTTCTTCAAATCAGTTTCATGGCTTTGCTCACTCAACCCCTTTTCTCTCTCCCAATACTCACAATTTCTTGGAAGAGATCTCAAATTCAAATTCAAATCCAAATCCAAATCCAAATTTTCTGATGAACCAAGCAGAAGGAATTGATTTGACCATGGCCACTCGTGTAGCTAATGATCTTCCAAGGCAGCCTCCAAGCATAAATAGACAGAAAATTAATGAAGAAAGAAAAGGGAAAAAAATGCCCTTGGATAAAGCTACTTTGGGGAGGAGATCCAACGGATTAAGGCTGCCAATCCAGACATATCTCATAGAGAAGCCTTCAGTGCTGCTGCTAAGAATTGGGCCCACTTCCCTCACATTCATTTTGGTTCTTCTTCCTGAGATATCAAACTGCCAAAAAGACAAGCATGCTTGA

Protein sequence

MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLPVNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLTMATRVANDLPRQPPSINRQKINEERKGKKMPLDKATLGRRSNGLRLPIQTYLIEKPSVLLLRIGPTSLTFILVLLPEISNCQKDKHA

Homology

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BLAST of CcUC10G188960 vs. NCBI nr
Match: XP_038876836.1 (protein YABBY 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-57
Identity = 117/145 (80.69%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P TFS L PPPS S+++CYVHCNICDT+LAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSFPTTFSQL-PPPSPSDEICYVHCNICDTILAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           VNMCGGM LPSSNQFHGFAHST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VNMCGGMFLPSSNQFHGFAHSTAFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRVAND+PRQPPSINR     +R
Sbjct: 121 MATRVANDVPRQPPSINRPPEKRQR 138

[Close]

BLAST of CcUC10G188960 vs. NCBI nr
Match: XP_038876835.1 (protein YABBY 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-57
Identity = 117/145 (80.69%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P TFS L PPPS S+++CYVHCNICDT+LAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSFPTTFSQL-PPPSPSDEICYVHCNICDTILAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           VNMCGGM LPSSNQFHGFAHST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VNMCGGMFLPSSNQFHGFAHSTAFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRVAND+PRQPPSINR     +R
Sbjct: 121 MATRVANDVPRQPPSINRPPEKRQR 138

[Close]

BLAST of CcUC10G188960 vs. NCBI nr
Match: XP_004150647.1 (protein YABBY 4 isoform X2 [Cucumis sativus] >XP_031738726.1 protein YABBY 4 isoform X2 [Cucumis sativus] >KGN55900.1 hypothetical protein Csa_009483 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 8.7e-57
Identity = 117/145 (80.69%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P TFS LPPPP  S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           VNMCGGMLLPS +QFHGF HST FLSPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VNMCGGMLLPSPSQFHGFTHSTTFLSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRV ND+PRQPP+INR     +R
Sbjct: 121 MATRVPNDVPRQPPTINRPPEKRQR 137

[Close]

BLAST of CcUC10G188960 vs. NCBI nr
Match: TYK19491.1 (protein YABBY 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 4.3e-56
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS+P TFS LPPP   S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSLPTTFSQLPPP---SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           V+MCGGMLLPS +QFHGF HST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VSMCGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKI 142
           MATRV ND+PRQPP+INR++I
Sbjct: 121 MATRVPNDVPRQPPTINRREI 132

[Close]

BLAST of CcUC10G188960 vs. NCBI nr
Match: XP_008448889.1 (PREDICTED: protein YABBY 4-like [Cucumis melo] >XP_016900570.1 PREDICTED: protein YABBY 4-like [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-55
Identity = 114/145 (78.62%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS+P TFS LPPP   S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSLPTTFSQLPPP---SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           V+MCGGMLLPS +QFHGF HST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VSMCGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRV ND+PRQPP+INR     +R
Sbjct: 121 MATRVPNDVPRQPPTINRPPEKRQR 136

[Close]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.2e-20
Identity = 69/170 (40.59%), Postives = 87/170 (51.18%), Query Frame = 0


Query: 4   SSIPNTFSL---------LPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGY 63
           SS P TFSL          PPP +  EQLCYVHCN CDT+LAV VPCSSLFK VTVRCG+
Sbjct: 3   SSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGH 62

Query: 64  CANLLPVNMCGGMLLPSSNQFHGFAHSTPFLSPNT-HNFLEEI-------SNSNSNPNPN 123
           CANLL VN+ G +L  +++  +        LSP + H  L+E+       S      +PN
Sbjct: 63  CANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPN 122

Query: 124 PNFL-------MNQAEGIDLTMATRVANDL-PRQP---PSINRQKINEER 146
            + +        N A    +  A   A    P+QP   PS NR     +R
Sbjct: 123 VSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQR 172

[Close]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot
Match: Q0JBF0 (Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.2e-20
Identity = 69/170 (40.59%), Postives = 87/170 (51.18%), Query Frame = 0


Query: 4   SSIPNTFSL---------LPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGY 63
           SS P TFSL          PPP +  EQLCYVHCN CDT+LAV VPCSSLFK VTVRCG+
Sbjct: 3   SSAPETFSLDHLSQHQQQQPPPLAEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGH 62

Query: 64  CANLLPVNMCGGMLLPSSNQFHGFAHSTPFLSPNT-HNFLEEI-------SNSNSNPNPN 123
           CANLL VN+ G +L  +++  +        LSP + H  L+E+       S      +PN
Sbjct: 63  CANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPN 122

Query: 124 PNFL-------MNQAEGIDLTMATRVANDL-PRQP---PSINRQKINEER 146
            + +        N A    +  A   A    P+QP   PS NR     +R
Sbjct: 123 VSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQR 172

[Close]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-19
Identity = 64/131 (48.85%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLP--PPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANL 60
           MSSSS  +    L     PS +EQLCYVHCN CDT+LAV VPCSSLFK VTVRCG+CANL
Sbjct: 1   MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60

Query: 61  LPVNMCGGMLLPS-----SNQFHGFAHSTPFLSPNT-HNFLEEISNSNSNPNPNPNFLMN 120
           L VN+  G+LLP+     +NQ H        LSP + H  L+E++         P+ LM 
Sbjct: 61  LSVNL-RGLLLPAPAPAPANQLH---FGPSLLSPTSPHGLLDEVAFQ------TPSLLME 120

Query: 121 QAEGIDLTMAT 124
           QA    L+  T
Sbjct: 121 QAASASLSSIT 121

[Close]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-19
Identity = 64/131 (48.85%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLP--PPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANL 60
           MSSSS  +    L     PS +EQLCYVHCN CDT+LAV VPCSSLFK VTVRCG+CANL
Sbjct: 1   MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL 60

Query: 61  LPVNMCGGMLLPS-----SNQFHGFAHSTPFLSPNT-HNFLEEISNSNSNPNPNPNFLMN 120
           L VN+  G+LLP+     +NQ H        LSP + H  L+E++         P+ LM 
Sbjct: 61  LSVNL-RGLLLPAPAPAPANQLH---FGPSLLSPTSPHGLLDEVAFQ------TPSLLME 120

Query: 121 QAEGIDLTMAT 124
           QA    L+  T
Sbjct: 121 QAASASLSSIT 121

[Close]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P   +  P   SS++QLCYVHC+ CDTVLAVSVP SSLFK VTVRCG+C+NLL 
Sbjct: 6   MSSSSAP---AFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLS 65

Query: 61  VNM-CGGMLLPS-SNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPN---PNFLMNQAE 120
           V +    +LLPS SN  H F    P   P   N LEE+ +   N N N    +       
Sbjct: 66  VTVSMRALLLPSVSNLGHSFLPPPP--PPPPPNLLEEMRSGGQNINMNMMMSHHASAHHP 125

Query: 121 GIDLTMATRVA------NDLPRQPPSINRQKINEER 146
              L MATR         ++PR PP+ NR     +R
Sbjct: 126 NEHLVMATRNGRSVDHLQEMPRPPPA-NRPPEKRQR 155

[Close]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL
Match: A0A0A0L1N8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G033810 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.2e-57
Identity = 117/145 (80.69%), Postives = 123/145 (84.83%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P TFS LPPPP  S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           VNMCGGMLLPS +QFHGF HST FLSPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VNMCGGMLLPSPSQFHGFTHSTTFLSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRV ND+PRQPP+INR     +R
Sbjct: 121 MATRVPNDVPRQPPTINRPPEKRQR 137

[Close]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL
Match: A0A5D3D7E7 (Protein YABBY 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001460 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.1e-56
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS+P TFS LPPP   S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSLPTTFSQLPPP---SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           V+MCGGMLLPS +QFHGF HST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VSMCGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKI 142
           MATRV ND+PRQPP+INR++I
Sbjct: 121 MATRVPNDVPRQPPTINRREI 132

[Close]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL
Match: A0A1S4DXY3 (protein YABBY 4-like OS=Cucumis melo OX=3656 GN=LOC103490918 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 7.9e-56
Identity = 114/145 (78.62%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS+P TFS LPPP   S+QLCYVHCNICDTVLAVSVP +SLFKRVTVRCGYCANLLP
Sbjct: 1   MSSSSLPTTFSQLPPP---SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDLT 120
           V+MCGGMLLPS +QFHGF HST F SPNTHNFLEEIS      NPNPNFLMNQ EGIDLT
Sbjct: 61  VSMCGGMLLPSPSQFHGFTHSTTFFSPNTHNFLEEIS------NPNPNFLMNQTEGIDLT 120

Query: 121 MATRVANDLPRQPPSINRQKINEER 146
           MATRV ND+PRQPP+INR     +R
Sbjct: 121 MATRVPNDVPRQPPTINRPPEKRQR 136

[Close]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL
Match: A0A6J1KZK7 (protein YABBY 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 104/146 (71.23%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSS S+P TFS  PPPP SS+ LCYVHCNICDTVLAVSVPC+SLFK VTVRCG+CANLLP
Sbjct: 1   MSSFSLPTTFSQHPPPPPSSDHLCYVHCNICDTVLAVSVPCASLFKTVTVRCGHCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGF-AHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDL 120
           VNM GGMLLPS N FH F   STPF +PN HNFLEEIS      NPNPNF MNQ +GIDL
Sbjct: 61  VNMRGGMLLPSPNHFHAFPPSSTPFFTPNAHNFLEEIS------NPNPNFAMNQTDGIDL 120

Query: 121 TMATRVANDLPRQPPSINRQKINEER 146
           TM TRV ND+PR P +INR    ++R
Sbjct: 121 TMVTRVGNDVPRAPSNINRPAEKKQR 140

[Close]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL
Match: A0A6J1KXR1 (protein YABBY 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 104/146 (71.23%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSS S+P TFS  PPPP SS+ LCYVHCNICDTVLAVSVPC+SLFK VTVRCG+CANLLP
Sbjct: 1   MSSFSLPTTFSQHPPPPPSSDHLCYVHCNICDTVLAVSVPCASLFKTVTVRCGHCANLLP 60

Query: 61  VNMCGGMLLPSSNQFHGF-AHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQAEGIDL 120
           VNM GGMLLPS N FH F   STPF +PN HNFLEEIS      NPNPNF MNQ +GIDL
Sbjct: 61  VNMRGGMLLPSPNHFHAFPPSSTPFFTPNAHNFLEEIS------NPNPNFAMNQTDGIDL 120

Query: 121 TMATRVANDLPRQPPSINRQKINEER 146
           TM TRV ND+PR P +INR    ++R
Sbjct: 121 TMVTRVGNDVPRAPSNINRPAEKKQR 140

[Close]

BLAST of CcUC10G188960 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSSSS P   +  P   SS++QLCYVHC+ CDTVLAVSVP SSLFK VTVRCG+C+NLL 
Sbjct: 6   MSSSSAP---AFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLS 65

Query: 61  VNM-CGGMLLPS-SNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPN---PNFLMNQAE 120
           V +    +LLPS SN  H F    P   P   N LEE+ +   N N N    +       
Sbjct: 66  VTVSMRALLLPSVSNLGHSFLPPPP--PPPPPNLLEEMRSGGQNINMNMMMSHHASAHHP 125

Query: 121 GIDLTMATRVA------NDLPRQPPSINRQKINEER 146
              L MATR         ++PR PP+ NR     +R
Sbjct: 126 NEHLVMATRNGRSVDHLQEMPRPPPA-NRPPEKRQR 155

[Close]

BLAST of CcUC10G188960 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 62/148 (41.89%), Postives = 81/148 (54.73%), Query Frame = 0


Query: 1   MSSSSIPNTFSLLPPPPSSSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLP 60
           MSS S P++    P   S S+ LCYV CN C T+LAV+VP +SLFK VTVRCG C NLL 
Sbjct: 3   MSSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLS 62

Query: 61  VNMCGGMLLPSSNQFHGFAHSTPFLSPNTHNFLEEISNSNSNPNPNPNFLMNQ---AEGI 120
           VNM    +LP+SNQ        P    N  + LEE+ ++ SN N     +MNQ      I
Sbjct: 63  VNM-RSYVLPASNQLQ--LQLGPHSYFNPQDILEELRDAPSNMN---MMMMNQHPTMNDI 122

Query: 121 DLTMATRVANDLPRQPPSINRQKINEER 146
              M     +++P+ PP +NR     +R
Sbjct: 123 PSFMDLHQQHEIPKAPP-VNRPPEKRQR 143

[Close]

BLAST of CcUC10G188960 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 19 SSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLPVNMCGGMLLPSSNQFHGF 78
          ++EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCG+C NL  VNM   +   S   F   
Sbjct: 7  ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 79 AHSTP 84
           ++ P
Sbjct: 67 NYAVP 71

[Close]

BLAST of CcUC10G188960 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 19 SSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLPVNMCGGMLLPSSNQFHGF 78
          ++EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCG+C NL  VNM   +   S   F   
Sbjct: 7  ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 79 AHSTP 84
           ++ P
Sbjct: 67 NYAVP 71

[Close]

BLAST of CcUC10G188960 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 30/45 (66.67%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 19 SSEQLCYVHCNICDTVLAVSVPCSSLFKRVTVRCGYCANLLPVNM 64
          SSE++CYVHC+ C T+LAVSVP +SLF  VTVRCG+C NLL +N+
Sbjct: 6  SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNI 50

The following BLAST results are available for this feature:

BLAST of CcUC10G188960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876836.1	1.0e-57	80.69	protein YABBY 4-like isoform X2 [Benincasa hispida]	[more]
XP_038876835.1	1.0e-57	80.69	protein YABBY 4-like isoform X1 [Benincasa hispida]	[more]
XP_004150647.1	8.7e-57	80.69	protein YABBY 4 isoform X2 [Cucumis sativus] >XP_031738726.1 protein YABBY 4 iso...	[more]
TYK19491.1	4.3e-56	80.85	protein YABBY 4-like [Cucumis melo var. makuwa]	[more]
XP_008448889.1	1.6e-55	78.62	PREDICTED: protein YABBY 4-like [Cucumis melo] >XP_016900570.1 PREDICTED: protei...	[more]

BLAST of CcUC10G188960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01JG2	5.2e-20	40.59	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]
Q0JBF0	5.2e-20	40.59	Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1	[more]
A2X7Q3	2.0e-19	48.85	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	2.0e-19	48.85	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]
Q9XFB1	1.8e-17	45.51	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]

BLAST of CcUC10G188960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1N8	4.2e-57	80.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G033810 PE=3 SV=1	[more]
A0A5D3D7E7	2.1e-56	80.85	Protein YABBY 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443...	[more]
A0A1S4DXY3	7.9e-56	78.62	protein YABBY 4-like OS=Cucumis melo OX=3656 GN=LOC103490918 PE=3 SV=1	[more]
A0A6J1KZK7	2.5e-49	71.23	protein YABBY 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3...	[more]
A0A6J1KXR1	2.5e-49	71.23	protein YABBY 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498508 PE=3...	[more]

BLAST of CcUC10G188960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00180.1	1.3e-18	45.51	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	1.9e-17	41.89	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	2.2e-13	50.77	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	2.2e-13	50.77	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	2.4e-12	66.67	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 19..137 e-value: 6.2E-26 score: 92.0
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..158
None	No IPR available	PANTHER	PTHR31675:SF36	PROTEIN YABBY 4-LIKE	coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G188960.1	CcUC10G188960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0010154	fruit development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:2000024	regulation of leaf development
biological_process	GO:1902183	regulation of shoot apical meristem development
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding