CcUC10G188760 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G188760
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
Location	CicolChr10: 3286928 .. 3291823 (+)
RNA-Seq Expression	CcUC10G188760
Synteny	CcUC10G188760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTTATTGTTCCGAAGAACAAGAACACAAAGGAGGAAGAGACGCCGATTTGGGAATTTTGAAGAGCGAAAGCCACCGGAAATGGCAGGCAAGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCTGTCGGCAAACACATCGTCCCCGACAAACCCGTAAGCATTTCAACCTTCTTCCCTTAAATTCGTTGCGAAATCAGTATCCCTTTGACGCAGATTTTGTAGGATTTATAATTGTTTTTCCCTTTTTAGCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTGCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGAAAGGTATGTTTGACCTCTTTGAGGATTTTTTTTATTATCATTTCTCCTCCAATTTGTATCTTTATCTTGTTTTTCTTCTCTTTCAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATACTGAACTGGACATCTTTTGCGGATCTTTTGTACTACGTTCTCTATTGGATTATTTGATATCCCCACCTGCATAGTCGCGTTACTATTGAAGGATAAAGCTCTTGTTCATTACCGTGCATTTTGTGAAATATGATGTTGCCTAGTTCAGTGCATCATTCAGAGTGAATTGTCTTTTCTCAAGGAATCAAATTGTGTTAGTTATCCTTTGCATATAGCACTTGATTTCTTTGATTTAGAGGCGGAAACATGAGCGGAGCTAGATAAATATTTCTTGAGATCGCCAACTTATAATATGATGCAAATCAGAACAGTTTTTTGTTTAATTTTATCCTATGGCACTGGAGACTTTCCACTAAGAGTAACTGTCTACCATGCCTAGCCTAGTAATATGGGGTTTTACTGACCAAAGTAGCAGGTCAAAGAGTATATTTTGTCACACAATTCTTTGGATTTTAGATCCTAGACTGATGTGAGAACCCTTACTGACGTGCACAGCTGTTTTGATAACTGGAGTGTCGTTCTCCCTTCTCTGTCCAAGCAATTAGGTTCAGGAGAGTAGGAGGGATAATGGGATCATGTTAGCAGAATTAGAAAGCAGTGAAGAAAAGGGAAGTAGGTGGGAATAGAAGTACTATTAACATTTTACTCATAGTGTTAATACTCTCATTCACTTGTTGTCTTGAAAATTAGTAAAAGGCCGAACAAGTTGCTATTAATATTACTTGGAGAGTATGAAATTACTGACTTAAACAGACCTTTTGGTCTTCTACCATGTTAAATGATCGCTAGATCGTGCGAAGAGGTGAAGACAACTCCAACACAAAGGAGTTACAGCAAACATCCCCAGTTTGGGAAAAGAGAAGCAAAGCTATAAGAATGGAAAAATATATGTAATTTACACCAAGAGATAGAGATAGCTTGGTAGATGACATTAGTCATTATCAAGGAATCTATAGTAATCACAATCCTTACCCACAAGCCTTTGATTTCTCTCAAACCAAGTAGACCGAAAGAAGGCCTGAACGAGATGTTTCCATATAAGCTCATTTTCTTTTATGAAAGGATGACCCACAAGAGTATACGAAAGAAGAGCTTTTGGGTCCATTGGAAGAGCCAGGGGGGATAACATCTTGATCCAAATTCTTGATCCAAAAGAACAAGTGGAAAATAAATGTATTTGTGATTCTGCATTTTTTTCTGCAAAGGATGCACCAATTTGGGGAGAGAACAACATTTGGCGACCTCATTTCAAAGAGGGTATTAACATTGCAAATAGACTCCAAAGAAGAATGCCACACTCCTCACTTTCCCCCACTTGGTTTGTTATGTGTTTTTCAAATGTGGAAACTCAATTTCAATTGTCATCTTTTTGGTACCTTTTTTGCCATTAGGTATTGACATTTTATGTTCTAAGCTTTTGGTTGGAACATGGTTATCCCGAGCACAATTCATGAGGAAAAGTCTTTTGCTAAAAGCTTGATTTTTAACATACTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTGTTGAGACGGAAACAAGCCTCTTCATTGGTGTATTGAAATGAGGCTATTGCTCAAAGTACCATAATGATATACTTTGAACAAAAGGAAAACAAAGGATTAGTAGATGCAACCAGGAATCTCAACTATGTTGACACCCCCTTAGCATCCTCATCATATCCATGTAAGATCTAATACAAACAAACCAAGAATTGAAGCTACTAACAAGACAGTCCACCAGTGATGAAACCACATAATTACAATACAAATGCAAACTTAAACTGGAAAAATAAAAGCGTGCCAATTTAAACATAGATCTTGTGGATGGAAAAGTCTTAAAAAAGCTTGGATAAGGTGCACCAAGATGAAACATTCAAGCGAGCCACCTCAAACTGGTCCATCCACCCAAGTTGTTTGTCATGGAATATCCTTTGGTTTTGGTCAAACCAATTTTCAGCACTTATCTCTCTAATTCAACTTGGGGTCAACAACGCTCTTATTCTTTCTCTCTTTTTTTCCTTTTTTTTTTTCATGGTTATCAACTCAATTTTAGATAATACAGAAGCAAAATAAGCCTCAAACTTGTCAAAGGTGGTCCCTTCTGTTCTTGCATTGACATCCCTTGAAACCACCTAGAGTGTTGAAAGATGCAAGCTAAAGGTCTAAGATGACAAAAGGACCATCAAGTTGAGTTGGTTTAATTTGTTTGAGCAATATATAAGTTGGTTGGGTTTATTTCATAAAATATAAAATAAAAAACTAGTCTATTGATTTAGATTTTATAGTTGAGTCGGTTTAATTTGTCTGGGAATTCCTCTAGACGAGACTCTGTCCCTCTAGAAACTCTTTGGTTTCTCTTGATTATTCTCCAAAGATTGGCTGTCATGGCATTGGACCATGAAACAAGAGCCAGCCCCTTAAAAGGAGAGCCTTCCAAAAGCTGAGAAAGGGTGGTTCAACCTTTTGGGAACACTAGTCTAAGCCAAAAGAATGAAAGAGGTTTGACTTCAACCAACCAGGAAGCTTGAAAGGGTCACTGCAAAAATACTTGATGATGACTCTATAAATTACTTTACACATCAACTAAAAAAACCCAGCATATTTGGGAGCTTACTTTGGATCACCCATCATCTTTGGATCAAAGGAAAGCTTTCATCTTCTTCAGAACCTTGGCCTTTCTTTCACATTGATTAGGCATTGATGAAGAGTGGTATTTCTCTCATTGATGTTGGGTGAGAGCCGACCGTTAAGCAGCTTCTGCTGTGGAGTATCTACCATCTAGAATCCTGCTGGATGCTAGGCTGAGTGTGGCTAATCAGATTCTGGAGTCTAATTCATTCCATCTTAATATCAGATAGATTCCTCCTAAGCTTTTATTTCAACTGGTGGGCGTCTTGTGACGAGCAACCACTCATGGTCAACTGCTTTGATTTTGCTACATTGTCAAGTCTTTGAGAGGGTTGCTACCCCTCCAGTCATCCCCCCAGAAGAAGACTAACCACTCTTGTTTTTTCCAGCTAGTTTTTTCATACGACCAAATAACTACCCTGAAAAAAAGATGTATCACAAAATGGGGGATTAAGAAGTACTTCCACTGGCATGTTAGCTGTCAAGACAATCTCAAGAGAGGGCGAGACAGGTTGAGAACATTCTTTTTTTTTAAAGAAACTCTCCCAATTCAGGATATCCTAGGAAGGAGCATCCTTAGAATTTATGGTTCAAATTCCTACTCATGTTTGCATAGAACAAACCACTGAGGCCCCAGCATAAGATGATACAATCTGTAGATAATTTCATAGGTATTGATCCTCCCTAAGAGACAAACCAAAGAACTTTATCTTCTTTTGAGTGTGAAATTCCATAGCTTTGGTTAAGGCATATATGCCTTGAACATGAGGTTAAAGGTTCAAATCTACCCCTAAATGTTGTGTCGAACTTCATATATATGTTAAGGATATAAGGGCAAGTGTTTCATCCAAATATAGATTCCAACGGAGAAAAGATCTGAAATTTCAAGGAAACCTGTTCTGTATTCTTGTTTTTTTGTTTGTAGAGCCTGGCTTCTAATGCTTTAATGTGGATTCCATTCACTACTTTTACTTCTTTGCTATTTTCATAGAAACCGATCTATTGACCGTGTTCCCTGTGACAAGACTATGCAGTGCCTTACGAAAATGAAACTGAATAAAGAAAAAGTTTATGGTTCAACTCTTCTAAGGACAACAACCGATCTATAATTTCACCAAAATAGTTTGCATTTGTCCCTGGACCCTTTTACTTGATGCATTATAAGACTTCTCTTTTCTTTCATCTTTTAAATCAATTCACCAGTATTTTCTTTATCGTGTTCCACCTTGACAGATCCTTGTATTATTATTTATCTTTCAACTCATTGTGCCTTGGTTTATGTTTTGGATGAATTTATCATTCTCAAGATGATTGATCATAAACTTCATCATTCTTTAATCAGGCACCAAAAGTGTATCCTTATGACAATCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGATATATCTCACATCGAATGACCATTGGTAATGTTTCTTTTCAGACACAAATCCTTGTTGAATTGTTTGCCTTTGGAATTTGCTATGCATCAAAATAATGGATTTTGTTGCCTGTGCTGAAATCTCTCTTTGGCATTGTGTAAATCACTTGCTATATTTTGATTCTTATAATGAGGTTCTGAAGACCTTTTGCCATCAAAATTCTAAAATAATGAATGAATTTCAATAAGTTATCATTTTGGGATGAGATGGG

mRNA sequence

AACCCTTATTGTTCCGAAGAACAAGAACACAAAGGAGGAAGAGACGCCGATTTGGGAATTTTGAAGAGCGAAAGCCACCGGAAATGGCAGGCAAGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCTGTCGGCAAACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTGCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGAAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATACTGAACTGGACATCTTTTGCGGATCTTTTGTACTACGCACCAAAAGTGTATCCTTATGACAATCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAGATAGATATATCTCACATCGAATGACCATTGGTAATGTTTCTTTTCAGACACAAATCCTTGTTGAATTGTTTGCCTTTGGAATTTGCTATGCATCAAAATAATGGATTTTGTTGCCTGTGCTGAAATCTCTCTTTGGCATTGTGTAAATCACTTGCTATATTTTGATTCTTATAATGAGGTTCTGAAGACCTTTTGCCATCAAAATTCTAAAATAATGAATGAATTTCAATAAGTTATCATTTTGGGATGAGATGGG

Coding sequence (CDS)

ATGGCAGGCAAGCTGAGCAATTTGGGTTCAAGGATCCTTGGCGGAAACGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGACTTCGCTCCGGCATGGGCCTTCCTGTCGGCAAACACATCGTCCCCGACAAACCCCTTCCTGTGAACGACGAACTGGTTTGGGATAATGGAACTGCTTTTCCCGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGAAAGTACGAAGCCTTGGCTTGGTTATGTGGGGGATTGGGATTTTTTGCATCTCTGGGATTTTTGGCTGTGTGGAACGATAAAGCGTCTAAGATACCATTTGTAAGTATACTGAACTGGACATCTTTTGCGGATCTTTTGTACTACGCACCAAAAGTGTATCCTTATGACAATCTAAGAGTGGAGCTTGGTGGAGAACCAGAAGCTTAG

Protein sequence

MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTAFPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLLYYAPKVYPYDNLRVELGGEPEA

Homology

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BLAST of CcUC10G188760 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 124/142 (87.32%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNL SRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGEPEA
Sbjct: 121 --APKVYPYDNLRVELGGEPEA 127

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BLAST of CcUC10G188760 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 6.1e-62
Identity = 122/142 (85.92%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGG+PEA
Sbjct: 121 --APKVYPYDNLRVELGGDPEA 127

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BLAST of CcUC10G188760 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 122/142 (85.92%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGEPEA
Sbjct: 121 --APKVYPYDNLRVELGGEPEA 127

[Close]

BLAST of CcUC10G188760 vs. NCBI nr
Match: XP_022923346.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita moschata] >KAG6577693.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015735.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60
Identity = 121/142 (85.21%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGEPEA
Sbjct: 121 --APKVYPYDNLRVELGGEPEA 127

[Close]

BLAST of CcUC10G188760 vs. NCBI nr
Match: XP_022950674.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata] >XP_023538880.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6596853.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 119/142 (83.80%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGE EA
Sbjct: 121 --APKVYPYDNLRVELGGEAEA 127

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BLAST of CcUC10G188760 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-55
Identity = 105/140 (75.00%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGTA
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEP 141
              P+VYPYDNLRVELGGEP
Sbjct: 121 --TPRVYPYDNLRVELGGEP 125

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BLAST of CcUC10G188760 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62
Identity = 122/142 (85.92%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGG+PEA
Sbjct: 121 --APKVYPYDNLRVELGGDPEA 127

[Close]

BLAST of CcUC10G188760 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62
Identity = 122/142 (85.92%), Postives = 125/142 (88.03%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAGKL+NLGS+ILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGG+PEA
Sbjct: 121 --APKVYPYDNLRVELGGDPEA 127

[Close]

BLAST of CcUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 122/142 (85.92%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGEPEA
Sbjct: 121 --APKVYPYDNLRVELGGEPEA 127

[Close]

BLAST of CcUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1E6K0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431068 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.6e-61
Identity = 121/142 (85.21%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGSRILGGNGVV RSI SSLR RSGMGLPVGKHIVP+KPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRRRSGMGLPVGKHIVPNKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGEPEA
Sbjct: 121 --APKVYPYDNLRVELGGEPEA 127

[Close]

BLAST of CcUC10G188760 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.6e-61
Identity = 119/142 (83.80%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LSNLGS++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGT 
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPF             
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEPEA 143
             APKVYPYDNLRVELGGE EA
Sbjct: 121 --APKVYPYDNLRVELGGEAEA 127

[Close]

BLAST of CcUC10G188760 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-56
Identity = 105/140 (75.00%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 1   MAGKLSNLGSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTA 60
           MAG+LS + SRI+GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGTA
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFVSILNWTSFADLL 120
           FPEPCIDRIADTVGKYEALAWL GGLGFF  LG LAV NDKASK+PF             
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPF------------- 120

Query: 121 YYAPKVYPYDNLRVELGGEP 141
              P+VYPYDNLRVELGGEP
Sbjct: 121 --TPRVYPYDNLRVELGGEP 125

The following BLAST results are available for this feature:

BLAST of CcUC10G188760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903151.1	1.2e-62	87.32	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni...	[more]
XP_004147198.1	6.1e-62	85.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_022965223.1	2.3e-61	85.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_022923346.1	1.2e-60	85.21	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu...	[more]
XP_022950674.1	2.0e-60	83.80	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ...	[more]

BLAST of CcUC10G188760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGK0	5.8e-55	75.00	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar...	[more]

BLAST of CcUC10G188760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J8	3.0e-62	85.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1	[more]
A0A1S3BK37	3.0e-62	85.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1HN93	1.1e-61	85.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1E6K0	5.6e-61	85.21	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu...	[more]
A0A6J1KTK9	9.6e-61	83.80	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ...	[more]

BLAST of CcUC10G188760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47570.1	4.1e-56	75.00	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36401:SF2	BNAC02G33360D PROTEIN	coord: 1..140
IPR038863	Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	PANTHER	PTHR36401	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G188760.1	CcUC10G188760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I