CcUC10G188340 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G188340
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosome biogenesis protein WDR12 homolog
Location	CicolChr10: 2572442 .. 2578050 (-)
RNA-Seq Expression	CcUC10G188340
Synteny	CcUC10G188340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCTCTCTCTTTCTTCTTCCTTCAGTCGCACGAGACCGACACGACATTTACTCCGGCAGCGCATAGGACGTCCGACGGTACCTGTGCACAACAACTTCGGTGCGACCCCGACGCGAAACTTACGAACGACGGCTCCGACCAACGTTCTCCAGCGACAGTCACGACCATCTTCCGGCCACACCTGCAGCGACCTTCATCTCCTTAAACACCGAAGCAACCTGCAGTGTTGTTGCGGTCACACAACTTCGGCGAACCAGCGGCGGCAACCCAATCTACAGCATACGTGCGTCTAAAGTTCAGCAGCTTTGACACTCTAAATTTTCTTTCGAACTAGTTTAAAATTCTTTAGGTTGGTCTCTAACACTCGGAAACTTGTATTCGAAGATTCGGAATAGTTTTGGAACTATTAGGTCGCTTTGCAGCAAGGACCCAAGTTCTCTGTTTGTAGTTTGAACTTGGTTTGAGTTGTTCGGACTGAGGTTTACGGCCGCTTTAGGTAACATTACTCATAATTGTTGAGCCTCTGAATTGAAACCGTGTTTTACTATTTCAACCGTTGCAACTCAAGATTTTGCTTGCGGCAATAAGTGTTACAGATATTGGATTCTTGATTTGCAGAGGCAGCAATGGATATTGATGCGGATTTTGAGGAGACTTCTCGCCGAATTCAAGTGCGCTTTATCACCAAACTAAATGCTCCTTTCAGAGTTCCAGCTAATGCCATTGCCATTCCCTCTAACCTAACCAGACTGGGCCTTTCCACCGTTGTTAACAATCTTCTTTCAGCTGGTATGCTATCTGATCATGTCAACGATGTGTTTTGGTTATTTGATGTTTGGCTGGAACCATGTTTCTGAGCTTCATATAAACTTTCTTTTTCAATAATTAAAATTATTACTTGATAGGGAATCCCGAATGGGAAGAAGAACCATTTGATTTTCTAATTGATGGCGAGCTTGTCAGAATGTCGCTGGAGAAATTCCTTCTTGCCAAGGGCATCTCAGCGGTAATATTTTTAATTTGGGCGACTTGTATTTTTTATTTTATTTTAAACTTTTTTCAATGTTCAGCTCCAAAGCTGTGTGTAAAGAAAATGAGAAACTTTTGAAGCCTCAAAATATACCATTTGTTTAGATTGAATTTTGTTAGTTGAAGATCTTATATGTTATTTTGGCATAAAATAGGAAAAAACATTGGAAATTGAGTACTTTAAGGCTGTTGCCCCACGAAGGGAGGAAGAGCCCTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTGTCCTGGGTAAGCATTTGAATGCAACGTCTACTTTGTTATCTAGTCGTCATCTATAATTCTTATCATCACTTTCATATCTCTCTCTCTCACACACACACGCACACACATATTTTAAAAATGCCTGCAAGTTCTAAAGATTTAGCGGTCACACCTCTTGTCACTCATAATGACAGTGCTAGTTCTTTTCCTTTTTAGTTTAGTTTATCTGAGTGTCAAAGATGAAGATGTACGATATAGCTTTTTCTATAGCTGCGTGTAGTACAATATAGTGTAATTTATTGAATGTTCATATCGTAGTTAGTATTTTTTTTTTCTTAGTAGTAACAGCTTTATGCACAACATTGAACTGTTACTGCTGTGTCATTACAATATATATACATACTTACGTACATACAATTTGATCTTGTACTCACTTGTATTTTACAGGTTCATTTTGACTGGTTGTTATGATGGCTTAGGAAGGTAATCTGTAGTTTTTTGTAATATATTTTTTAGTACTTGAAGGAATCGATAAGTTGTTGCCTTTGTTACTATAGTTTCATGAACAACCTAAAAACTTCTATTATTGTTCCCTAGGGTGTGGGAGTCTGCGGGATTGTGTACACGTATTCTCGAAGGTCACAGTGATGCCATATCTTCTGTTTGTATTGTGAACCCTGAAGGTAAATTTACTACAATTAATAGCTCGGACATTGAACGATGCTTTGCCTGTTGTATTAGCTGATATTATTTTCTATATCAAATTATTAATTATTTCTTGTAAGCAATGTTTTAAAAGGATAAAGGCGTTGAGGCTTTTCCTCTTGTATAGGCGAGGCCATTTTAGAATTCCTAAATTAGTATGACCAAGTAATGCTAAACATGATAGTCACATAAAAGTGTGAAAAGAATTTACCCCAAAATTTTCACTCAATCAATAATTTGAAAAAGATGTCTTCATCATCACAACTACCACTATTATCATTAATAGGATTAATTTATACAATAAATTTTGCCTTCAATTTTTTTAAAGTCAAAGCAGTAGAAGTAGACCTCGTTCAAATTGTTACAACTCAAACCCTAATGTTTTTGAAGAATTAAGCAAATCACCATTATTTTTCTAATCATTGGACGATGCACAGAGATATTATGTCTCGGTGTATTTTCACAAAGGTGTAAGCCTCTTATGCTTTGACAAAGGTGTATGTGCTTTGAGGCAACCCTCAATAGCTTCTTAAAACATTGCTTGTAAGCACCTGCTCCTGTTTTCTATATCAAATCATCACTATATTTATTCGTTTTCTACTTCTTCCAAGTGTAGGATGGCCTTTTTATTTATTTATTTTTTAATTGATAACAATTGGTTATTGTTATTTAAAAGAAACAGTATTTTCATGAATCAGAATATTATATGTTAACATGAAAATTTTAAATCAGTTGTGTTTGAGAAATTTGTTGTACATGCGGAGGTGTGCTTCCATGTTCCAAGGTTAATCTTTAACCCAAGTTTTCTTCACTGAAAGTGCTAGGAAATCCTTGTGTCTGGATTTCTATTTTCTTGTGCAAGCGGGGCTCTTCTCCATATCAATATCTTTTTCATTTCAGAAACTTTGTGTCATTGGGCTTTAGACCTTGTTGCCATATAAACCATATCTGATTTGCCAATAAAATACTAGTCTTCTTCTAATTTATATTTTATTATTTTACTGAAATGTGATTCTTTAATTCAAGTTTGAATTTTACAATTGATATTTTAATTTCCAGTTCTTTTTCCACTCTCTAGTCTCTATGGTTTATTGACTTTTTACCATGCTGATACAGAAGCAACTAATGTCATTCTGGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGGTAACTTTGAAAAAGTACAGGTTTAAAGTTGTACTGATGTAATTAATAATCTAACAAAACAAGCGTTCTTGTTTCCATTTGAAGTATTCAAAAGACGATCGAGTTAGCAACCCTACCAAAATAAGGCCATTCAAAATCTTGAAAGGACATAAATTGTCTGTACAAAGTGTTGCATCACAAAAATCTGGACACCTGGTATGATCTCATTCTTATGGCTGTTTTGTGTAAATCTGTTCAAGTAAAAAGTGAAAGCTACAGCTATCAACTCACAAGTTTAGCTCATATTACTTTGATCTATTTATTTTGTAATGTAGATCTGTTCAGGTTCTTGGGATTACACGATCAAGTTATGGCGAACTGATGAGCATCATTTTGAAGGCGATGTCTCCATTAAGAAGAGAAAAAAGAATGACCAGGCCGAAGAATCTCAGTTAGAGGTAAAACATTGTTTTCGTTCTTTTTTAGTTAGTTGGATCTACATCATGTTACAAGACTCGGTATTAATTTACCACTGGAGAACATGTTAATGTGCAGCTCCAATTTCAAGAGAATTATTGAAACGCAGATTTTGGTAATGAAAACAAGCAAAAGGAATGCCTCCAGTACTAGTTAAATATTTGTGTTCGTTGAATGGTTATTGATTGAGTCACTTTATGACTTGGATTCTCACTTCTTGGGTTTTGACTAATTTGAGTTGCCTTAATGGGAGTTCCATGAAAAATAGCTGTGTTGGTTTGTTACCAACCAATTCTTACTTTCTGGATTGTAATATTGTTCTATAATACTCTTGATTAAATTAATGTATAAAAATATATCTAACAGGAGGACTCTGTTGCTACACTTGTTGGCCATTCACAATCTGTATCGTCAGTTGCATGGCCAAAGCATGAAGAAATTTATTCAGTATCATGGGACCATTCTGTAAGAAGCTGGGATGTCGAGACGGGCAATGTTTTGTTTAATCATGTAGGTCTCTGAACTCCAAGTGTTCTTGAAGTAAAATTTAATTTTCACTTTTTGAAGTTTTCTTGTTTCAAATGCATGAGGTGGGTGTCCGTAGTTAGTTATGCATTCACCATATTCACGAAATTTTCTATAGAAATCAACTTTGATTAAAATGTGGTCTGCAAAGCTTGAATCTCTCGAGGGAAAGACATTAAAAAGGTTCAGAAGTAGTTAGGACATGTATGAGAGTAATTTTGAAATAGTTAAAAATTACTTTTACCATGTCCAAAATCATTTCGAAACATGTCTTTAATTATTCAAAAGTGAAAACAATATAATGTTTGATCTTACTCTTTTAAATATGTTTTTCATCCGATTAAAATTGTTTTTGTACGATAAAAACTATGTTTCGGGGTGATTTGAACTTGACAAAAGTGATTTGAACAATTTTAAAAAGCTTGGATAGTTTGAAACTATTAGCAGTAGCGAAGGAAAGGATAGTTGACAATTGAAAACATCCCCTTTTATGTGCATGCTATTGGTTGTTACATACCCCTTGTGAAGCAGCAGGTGAAGGTCCTTTGTAATTTATGACAATTAGCAAAGGTTCCCTTTCTATGAATGAACTATCTTATATCTTATGTCTTCATGTTAATTGGTCTTTAATGAAAGACGAATCCATTCACAAAAGAAAAAAAATTGTCCCCACTGGCAGTTATCTGGTAAGGCACTCAACTGCCTCGACATTGGAGGTGAAGGTTCCTCTCTCATTGCTGCTGGTGGCTCAGACCCGATCGTCAGGATATGGGATCCTCGTAAGCCAGGTATATGAGAACGGGAAATGGGCTGGAAAGAGATTTCCCTCTTAAATCACTTCCTGTTTCTAATGCTGTGATTTTTGTATAGGAACTTCTAGTCCAATCTTTCAGTTCTCATCCCATACTTCCTGGGTTTCGGCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTGCATCGTATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGGTACTCAAATATCATTCTCTTCTCTCTATTGTTTGTTATGAATTAAATGCATTGACCTCGCAGTAATATTGTGTTTTTGTTCATCTTATAGTGGCCTTTAGCTGTAATTGACTCTCACAAAGAGAAGGTACCCATTCAATTCCCATCCTCAGGAATGTAGCTGCCCTTAGTGCAACTTTTGTTTCATTGATGAATATTTTGCAAATCTCAGGTACTATCTGCTGATTGGTGGAAAGATGACAATGTTGTCAGTGGTGGGGCAGACTCTAAACTGCGGATTTCGTCCGGAATTTATGTTTCGTAAGGTAGAAGCTACAGCTATGGTGGTAAAGATTTCAGTTTACCACAAAATGACCGGCTTGATTTTACTGATTATGAAAGGGCTGTTAGATGCTTGCAACAATCCCAATCCTTGCCCCTTGTTGCTTCTAGTTTTTTCTTTCAGGACTCTCTTCTTTCCAGTGTTGGGTAG

mRNA sequence

TTTTTTTCTCTCTCTTTCTTCTTCCTTCAGTCGCACGAGACCGACACGACATTTACTCCGGCAGCGCATAGGACGTCCGACGGTACCTGTGCACAACAACTTCGGTGCGACCCCGACGCGAAACTTACGAACGACGGCTCCGACCAACGTTCTCCAGCGACAGTCACGACCATCTTCCGGCCACACCTGCAGCGACCTTCATCTCCTTAAACACCGAAGCAACCTGCAGTGTTGTTGCGGTCACACAACTTCGGCGAACCAGCGGCGGCAACCCAATCTACAGCATACATTCGGAATAGTTTTGGAACTATTAGGTCGCTTTGCAGCAAGGACCCAAGTTCTCTGTTTGTAGTTTGAACTTGGTTTGAGTTGTTCGGACTGAGGTTTACGGCCGCTTTAGAGGCAGCAATGGATATTGATGCGGATTTTGAGGAGACTTCTCGCCGAATTCAAGTGCGCTTTATCACCAAACTAAATGCTCCTTTCAGAGTTCCAGCTAATGCCATTGCCATTCCCTCTAACCTAACCAGACTGGGCCTTTCCACCGTTGTTAACAATCTTCTTTCAGCTGGGAATCCCGAATGGGAAGAAGAACCATTTGATTTTCTAATTGATGGCGAGCTTGTCAGAATGTCGCTGGAGAAATTCCTTCTTGCCAAGGGCATCTCAGCGGCTGTTGCCCCACGAAGGGAGGAAGAGCCCTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTGTCCTGGGGTGTGGGAGTCTGCGGGATTGTGTACACGTATTCTCGAAGGTCACAGTGATGCCATATCTTCTGTTTGTATTGTGAACCCTGAAGTTCTTTTTCCACTCTCTAGTCTCTATGGTTTATTGACTTTTTACCATGCTGATACAGAAGCAACTAATGTCATTCTGGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACGATCGAGTTAGCAACCCTACCAAAATAAGGCCATTCAAAATCTTGAAAGGACATAAATTGTCTGTACAAAGTGTTGCATCACAAAAATCTGGACACCTGATCTGTTCAGGTTCTTGGGATTACACGATCAAGTTATGGCGAACTGATGAGCATCATTTTGAAGGCGATGTCTCCATTAAGAAGAGAAAAAAGAATGACCAGGCCGAAGAATCTCAGTTAGAGGAGGACTCTGTTGCTACACTTGTTGGCCATTCACAATCTGTATCGTCAGTTGCATGGCCAAAGCATGAAGAAATTTATTCAGTATCATGGGACCATTCTGTAAGAAGCTGGGATGTCGAGACGGGCAATGTTTTGTTTAATCATTTATCTGGTAAGGCACTCAACTGCCTCGACATTGGAGGTGAAGGTTCCTCTCTCATTGCTGCTGGTGGCTCAGACCCGATCGTCAGGATATGGGATCCTCGTAAGCCAGGAACTTCTAGTCCAATCTTTCAGTTCTCATCCCATACTTCCTGGGTTTCGGCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTGCATCGTATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGAGAAGGTACTATCTGCTGATTGGTGGAAAGATGACAATGTTGTCAGTGGTGGGGCAGACTCTAAACTGCGGATTTCGTCCGGAATTTATGTTTCTTTACCACAAAATGACCGGCTTGATTTTACTGATTATGAAAGGGCTGTTAGATGCTTGCAACAATCCCAATCCTTGCCCCTTGTTGCTTCTAGTTTTTTCTTTCAGGACTCTCTTCTTTCCAGTGTTGGGTAG

Coding sequence (CDS)

ATGGATATTGATGCGGATTTTGAGGAGACTTCTCGCCGAATTCAAGTGCGCTTTATCACCAAACTAAATGCTCCTTTCAGAGTTCCAGCTAATGCCATTGCCATTCCCTCTAACCTAACCAGACTGGGCCTTTCCACCGTTGTTAACAATCTTCTTTCAGCTGGGAATCCCGAATGGGAAGAAGAACCATTTGATTTTCTAATTGATGGCGAGCTTGTCAGAATGTCGCTGGAGAAATTCCTTCTTGCCAAGGGCATCTCAGCGGCTGTTGCCCCACGAAGGGAGGAAGAGCCCTCTGTTCATGATGATTGGGTCAGTGCAGTTGATGGGTCTTGTCCTGGGGTGTGGGAGTCTGCGGGATTGTGTACACGTATTCTCGAAGGTCACAGTGATGCCATATCTTCTGTTTGTATTGTGAACCCTGAAGTTCTTTTTCCACTCTCTAGTCTCTATGGTTTATTGACTTTTTACCATGCTGATACAGAAGCAACTAATGTCATTCTGGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACGATCGAGTTAGCAACCCTACCAAAATAAGGCCATTCAAAATCTTGAAAGGACATAAATTGTCTGTACAAAGTGTTGCATCACAAAAATCTGGACACCTGATCTGTTCAGGTTCTTGGGATTACACGATCAAGTTATGGCGAACTGATGAGCATCATTTTGAAGGCGATGTCTCCATTAAGAAGAGAAAAAAGAATGACCAGGCCGAAGAATCTCAGTTAGAGGAGGACTCTGTTGCTACACTTGTTGGCCATTCACAATCTGTATCGTCAGTTGCATGGCCAAAGCATGAAGAAATTTATTCAGTATCATGGGACCATTCTGTAAGAAGCTGGGATGTCGAGACGGGCAATGTTTTGTTTAATCATTTATCTGGTAAGGCACTCAACTGCCTCGACATTGGAGGTGAAGGTTCCTCTCTCATTGCTGCTGGTGGCTCAGACCCGATCGTCAGGATATGGGATCCTCGTAAGCCAGGAACTTCTAGTCCAATCTTTCAGTTCTCATCCCATACTTCCTGGGTTTCGGCTTGCAAGTGGCACGATAAATCTTGGTTCCATTTGCTGTCTGCATCGTATGATGGGAAAGTTATGCTGTGGGATCTAAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGAGAAGGTACTATCTGCTGATTGGTGGAAAGATGACAATGTTGTCAGTGGTGGGGCAGACTCTAAACTGCGGATTTCGTCCGGAATTTATGTTTCTTTACCACAAAATGACCGGCTTGATTTTACTGATTATGAAAGGGCTGTTAGATGCTTGCAACAATCCCAATCCTTGCCCCTTGTTGCTTCTAGTTTTTTCTTTCAGGACTCTCTTCTTTCCAGTGTTGGGTAG

Protein sequence

MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEEPFDFLIDGELVRMSLEKFLLAKGISAAVAPRREEEPSVHDDWVSAVDGSCPGVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWPKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKEKVLSADWWKDDNVVSGGADSKLRISSGIYVSLPQNDRLDFTDYERAVRCLQQSQSLPLVASSFFFQDSLLSSVG

Homology

[Close]

BLAST of CcUC10G188340 vs. NCBI nr
Match: TYK05339.1 (ribosome biogenesis protein WDR12-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 781.9 bits (2018), Expect = 3.0e-222
Identity = 400/491 (81.47%), Postives = 416/491 (84.73%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVSLPQNDR---------LDFTDYERAVRC 461
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVSL              L F   E+A+ C
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVSLLDACNSPNLCCFLVLYFPVNEKALGC 472

[Close]

BLAST of CcUC10G188340 vs. NCBI nr
Match: KAA0041816.1 (ribosome biogenesis protein WDR12-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 781.9 bits (2018), Expect = 3.0e-222
Identity = 404/497 (81.29%), Postives = 418/497 (84.10%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVSLPQNDR---------LDFTDYERAVRC 464
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVSL              L F   E+A+ C
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVSLLDACNSPNLCCFLVLYFPVNEKALGC 478

[Close]

BLAST of CcUC10G188340 vs. NCBI nr
Match: XP_008442030.1 (PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis melo] >XP_008442032.1 PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis melo])

HSP 1 Score: 769.6 bits (1986), Expect = 1.6e-218
Identity = 386/453 (85.21%), Postives = 398/453 (87.86%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVS 432
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVS
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVS 434

[Close]

BLAST of CcUC10G188340 vs. NCBI nr
Match: XP_004149101.1 (ribosome biogenesis protein WDR12 homolog [Cucumis sativus] >KGN53899.1 hypothetical protein Csa_019131 [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 7.7e-218
Identity = 384/452 (84.96%), Postives = 396/452 (87.61%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRR+QVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGFGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRT+RLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTIRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRKKN QAEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKKNTQAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRRWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVS CKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSDCKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYV 431
            +KVLSADWWKDD++VSGGADSKLRISSGIYV
Sbjct: 421 NDKVLSADWWKDDSIVSGGADSKLRISSGIYV 433

[Close]

BLAST of CcUC10G188340 vs. NCBI nr
Match: XP_038875775.1 (ribosome biogenesis protein WDR12 homolog [Benincasa hispida] >XP_038875785.1 ribosome biogenesis protein WDR12 homolog [Benincasa hispida])

HSP 1 Score: 760.8 bits (1963), Expect = 7.2e-216
Identity = 383/453 (84.55%), Postives = 394/453 (86.98%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MD D  F++TSRRIQVRFITKL APF+VPANAIAIPS+LTRLGLST+VNNLLSAGNPEW+
Sbjct: 1   MDTDGVFDDTSRRIQVRFITKLKAPFKVPANAIAIPSSLTRLGLSTIVNNLLSAGNPEWK 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYLKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWE AGLCT ILEGHSDAISSVC VNPE                
Sbjct: 121 SCPGFILTGCYDGLGRVWEPAGLCTHILEGHSDAISSVCTVNPE---------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRVS PTKIRPFKILKGH+LSVQSVASQKSG L
Sbjct: 181 ---EATNVTLATASKDRTLRLWKYSKDDRVSIPTKIRPFKILKGHRLSVQSVASQKSGDL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD TIKLWRTDEHH EGDVSIKKRKKNDQAEESQLEEDSVATL GHSQ VSSVAW
Sbjct: 241 ICSGSWDCTIKLWRTDEHHSEGDVSIKKRKKNDQAEESQLEEDSVATLAGHSQCVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNHL GKALNCLDIGGEGS+LIAAGGSDP VRIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHLCGKALNCLDIGGEGSALIAAGGSDPTVRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVS 432
           KEKVLSADWWKDD+V+SGGADSKLRIS GIYVS
Sbjct: 421 KEKVLSADWWKDDSVISGGADSKLRISLGIYVS 434

[Close]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot
Match: Q9LF27 (Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR12 PE=1 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.1e-165
Identity = 285/452 (63.05%), Postives = 350/452 (77.43%), Query Frame = 0


Query: 3   IDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEE 62
           +D D E+ SRR+ V+F+TKL++PF+VP N++AIPSN+TRLGLS++VN+++ + NPEW+ E
Sbjct: 1   MDIDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWKTE 60

Query: 63  PFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDGSC 122
           PFDFLIDGEL+RMSLE+FLLAKGISA          AV PR+EEEPS+HDDWVSAV+GS 
Sbjct: 61  PFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSS 120

Query: 123 P------------GVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHAD 182
           P             VW SAG C+ ILEGHS AISSV +VN                    
Sbjct: 121 PRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVN-------------------S 180

Query: 183 TEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLIC 242
            +A  V +ATASKDRTLRL+K+   + V + TK+R +KIL+GHK SVQSV++QKSG+++C
Sbjct: 181 NDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVC 240

Query: 243 SGSWDYTIKLWRTDEHHFEGD-VSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWP 302
           S SWD TI LW T+E   EG+ VS+KKRK N+QAEESQ E ++V +LVGH+Q VSSV WP
Sbjct: 241 SSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP 300

Query: 303 KHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWD 362
           +H+ IYS SWDHSVR WDVETG    N   GKALN +D+GGE S+LIAAGGSDPI+R+WD
Sbjct: 301 EHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWD 360

Query: 363 PRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHK 422
           PRKPGTS+P+FQFSSH+SW+SACKWH  SWFHLLSASYDGK+MLWDLRTAWPL+VID+H 
Sbjct: 361 PRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHN 420

Query: 423 EKVLSADWWKDDNVVSGGADSKLRISSGIYVS 432
           +KVLSADWWK ++VVSGGADS LRISSGI +S
Sbjct: 421 DKVLSADWWKGESVVSGGADSNLRISSGIAIS 433

[Close]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot
Match: Q8H594 (Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=WDR12 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.7e-141
Identity = 253/448 (56.47%), Postives = 321/448 (71.65%), Query Frame = 0


Query: 9   ETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEEPFDFLI 68
           + SR+++VRF+TKL AP R P  +IA+P++LTR+GLS +VN+LL A +P+ + +PFDFL+
Sbjct: 8   DPSRQVRVRFLTKLPAPLRAPPTSIAVPADLTRMGLSEIVNSLLLAASPDHQAQPFDFLV 67

Query: 69  DGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDGSCPG---- 128
           DGELVR+ L++FLLAKGIS           AVAPR++E+P  HDDWVSAVDGS P     
Sbjct: 68  DGELVRLPLQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDGSNPSFVLT 127

Query: 129 --------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNV 188
                   +W  A  CT ILEGHSD I+S   +N                   +TE   +
Sbjct: 128 GCYDGLARIWRDASECTHILEGHSDGITSARFIN-----------------KGETE-DRL 187

Query: 189 ILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDY 248
            + TASKDR+LRL+K+  D  VS P +I  +KIL+GH  SVQSVA   S ++ICSGSWD 
Sbjct: 188 HVVTASKDRSLRLFKF--DTSVSVPKQIGAYKILRGHTSSVQSVAVDPSTNMICSGSWDN 247

Query: 249 TIKLWRTDEHHFEGD-VSIKKRKKNDQA---EESQLEEDSVATLVGHSQSVSSVAWPKHE 308
           +IKLW  +    +GD VS+KKR+ N  +   EES  E  + +T +GH+Q VS+V WP+ +
Sbjct: 248 SIKLWSVEGSEEDGDTVSVKKRRTNSDSSGPEESLFEGSATSTFLGHTQCVSAVTWPERQ 307

Query: 309 EIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPRK 368
            IYS SWDHSVR WDV+TG   +N +SGKALNCLD GGE SSLIAAGGSDP++R+WDPRK
Sbjct: 308 TIYSASWDHSVRQWDVQTGKETWNMVSGKALNCLDCGGESSSLIAAGGSDPVLRVWDPRK 367

Query: 369 PGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKEKV 428
           PGT +PIFQFSSH SW+SACKWH  SWFHL+S+S+DGKVMLWDLRTAWPLA ++SHK+KV
Sbjct: 368 PGTLAPIFQFSSHKSWISACKWHPSSWFHLVSSSFDGKVMLWDLRTAWPLASVESHKDKV 427

Query: 429 LSADWWKDDNVVSGGADSKLRISSGIYV 431
           L ADWWK D+V+SGGADSKL I+SGI +
Sbjct: 428 LCADWWKGDSVISGGADSKLCIASGIEI 435

[Close]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot
Match: A8IR43 (Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_128420 PE=3 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-65
Identity = 159/446 (35.65%), Postives = 234/446 (52.47%), Query Frame = 0


Query: 8   EETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEEPFDFL 67
           EET  ++ V+F+TKL A  RVP   +A+PS+L R GLS ++N+LL+   P     PFDFL
Sbjct: 3   EET--QVLVKFVTKLPAHLRVPETPVAVPSDLKRYGLSQIINHLLALDPP----RPFDFL 62

Query: 68  IDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDGS-CPGVW 127
           IDGELVR SLE+ LLA  +SA          AV P +++  + HDDWVS+VDGS C    
Sbjct: 63  IDGELVRKSLEQHLLAHNLSAESTLEVEYVPAVVPPQQKNSTPHDDWVSSVDGSRCAPAS 122

Query: 128 ESAGLCTR-ILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNVILATASKDR 187
            S G  +  ++ G  D +  +   + E +  +S+  G +       ++   +L T+ KDR
Sbjct: 123 SSGGSPSGVVVSGSYDGLLRLWNGDLEAVASVSAHAGGVNCVRFLPKSQGDLLLTSGKDR 182

Query: 188 TLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDYTIKLWRTDE 247
            +++W+ S  +        R     +GH+  V++VA+  SG    S  WD  + +W   E
Sbjct: 183 LVKMWQLSSSEEEDAGPSCRLVATYRGHEDGVEAVAASPSGRRFASCGWDGKLLVWEGGE 242

Query: 248 --HHFEGDV-SIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWPKHEEIYSVSWDHS 307
                 G   + KK++K   A  S       A L GH   VSSVAWP    ++S  WDHS
Sbjct: 243 QLRWAAGTAEASKKKRKTGTANGSAAAGAGGADLRGHLHCVSSVAWPAENSLFSGGWDHS 302

Query: 308 VRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPR-KPGTSS-PIF 367
           VR WDV +G     +   KA+ C+       +L+A G SD  +R+WD R K G+ +  + 
Sbjct: 303 VRRWDVSSGAAADTYNGSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAGSDALAVT 362

Query: 368 QFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKEKVLSADW--- 427
              +H  WV+A  W   S  H+ SAS+DG + +WD+RT  PL ++  H +KVL+  W   
Sbjct: 363 TQGAHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIRTQIPLGMLSHHTDKVLALGWLGG 422

Query: 428 ---WKDDNVVSGGADSKLRISSGIYV 431
                   +VSGGAD +LR+    Y+
Sbjct: 423 AEAGHARGLVSGGADCQLRMYESDYI 442

[Close]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot
Match: Q5BJ90 (Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.9e-58
Identity = 142/434 (32.72%), Postives = 215/434 (49.54%), Query Frame = 0


Query: 13  RIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEEPFDFLIDGEL 72
           +IQ RF T+    ++V     +IP+    + LS ++N LL   N + +   FDFL+  + 
Sbjct: 3   QIQARFFTE-EEKYKVDDVPFSIPATSEIVDLSNLINKLLETKNGDHKPVEFDFLVKSQF 62

Query: 73  VRMSLEKFLLAKGISAAVAPRRE----------EEPSVHDDWVSAVDGS----------- 132
           +RM L K + A+GIS  V    E          EE  +HDDWVS++ G+           
Sbjct: 63  LRMPLIKHMEAEGISTEVVVEIEYVEKITAPQPEECMMHDDWVSSIAGTEEWILTGSYDK 122

Query: 133 CPGVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNVILATA 192
              +W   G     + GH++A+  V  V  + L                    + +L +A
Sbjct: 123 TCRIWSLEGKTIMTITGHTEAVKDVTWVKKDSL--------------------SCLLLSA 182

Query: 193 SKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDYTIKLW 252
           S D+T++LW+++     +   KI+     +GH  SV S+A   S    CSGSWD  +K+W
Sbjct: 183 SIDQTIQLWEWN-----TERNKIKALHCCRGHAGSVDSIAVDASRTKFCSGSWDKMLKIW 242

Query: 253 RT--DEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWPKHEEIYSVSW 312
                E   E + +  + +K  + E+  L    + TL GHS++VSSV W   +EI S SW
Sbjct: 243 SAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLSGHSEAVSSVLWSDVDEICSASW 302

Query: 313 DHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPRKPGTSSPI 372
           DH+++ WDVETG V       K  NC+      S  +A+G +D  +R+WDPR    S  +
Sbjct: 303 DHNIKIWDVETGTVKSTLAGNKVFNCISY-SPLSQRLASGSTDRHIRLWDPRSKDGSLVL 362

Query: 373 FQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTA-WPLAVIDSHKEKVLSADWW 423
              +SHT WV++ KW       L+S S D  V LWD R+   PL  + +H +KVLS DW 
Sbjct: 363 CSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWT 409

[Close]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot
Match: Q0VC24 (Ribosome biogenesis protein WDR12 OS=Bos taurus OX=9913 GN=WDR12 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.9e-57
Identity = 139/434 (32.03%), Postives = 211/434 (48.62%), Query Frame = 0


Query: 13  RIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEEPFDFLIDGEL 72
           ++Q RF T  N  + V     +IP+      LS ++N LL A N   +   FDFLI G+ 
Sbjct: 3   QLQTRFFTD-NKKYAVDDVPFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQF 62

Query: 73  VRMSLEKFLLAKGISAAVAPRRE----------EEPSVHDDWVSAVDGS----------- 132
           +RM L K +  + IS+      E          E+   HDDW+SA++G+           
Sbjct: 63  LRMPLFKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISAIEGTEEWILTGSYDK 122

Query: 133 CPGVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNVILATA 192
              +W   G     + GH+D +  V  V  + L                    + +L +A
Sbjct: 123 TSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSL--------------------SCLLLSA 182

Query: 193 SKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDYTIKLW 252
           S D+T+ LW+++ +       K++     +GH  SV S+A   +G   CSGSWD  +K+W
Sbjct: 183 SMDQTILLWEWNVE-----RNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIW 242

Query: 253 RT--DEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWPKHEEIYSVSW 312
            T   +   E + S  + +K  + E+  L    + TL GH +++SSV W   EEI S SW
Sbjct: 243 STVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASW 302

Query: 313 DHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPRKPGTSSPI 372
           DH+++ WDVE+G++       K  NC+        L A+G +D  +R+WDPR    S   
Sbjct: 303 DHTIKVWDVESGSLKSTLTGNKVFNCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVS 362

Query: 373 FQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTA-WPLAVIDSHKEKVLSADWW 423
              +SHT WV++ KW       L+S S D  V LWD R+   PL  + +H++KVLS DW 
Sbjct: 363 LSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWT 409

[Close]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL
Match: A0A5D3C4N3 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00050 PE=3 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 1.5e-222
Identity = 400/491 (81.47%), Postives = 416/491 (84.73%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVSLPQNDR---------LDFTDYERAVRC 461
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVSL              L F   E+A+ C
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVSLLDACNSPNLCCFLVLYFPVNEKALGC 472

[Close]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL
Match: A0A5A7TIJ1 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001930 PE=3 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 1.5e-222
Identity = 404/497 (81.29%), Postives = 418/497 (84.10%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVSLPQNDR---------LDFTDYERAVRC 464
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVSL              L F   E+A+ C
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVSLLDACNSPNLCCFLVLYFPVNEKALGC 478

[Close]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL
Match: A0A1S3B4A1 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC103486017 PE=3 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 7.5e-219
Identity = 386/453 (85.21%), Postives = 398/453 (87.86%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRRIQVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRTLRLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTLRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRK N++AEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRKWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVSACKWH+KSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYVS 432
           K+KVLSADWWKDD+VVSGGADSKL ISSGIYVS
Sbjct: 421 KDKVLSADWWKDDSVVSGGADSKLHISSGIYVS 434

[Close]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL
Match: A0A0A0KYI3 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G187290 PE=3 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.7e-218
Identity = 384/452 (84.96%), Postives = 396/452 (87.61%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID DFE+TSRR+QVRFITKL APF+VPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE
Sbjct: 1   MDIDGDFEDTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
           EEPFDFLIDGELVRMSLEKFLLAKGISA          AVAPRREEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNP                 
Sbjct: 121 SCPGFILTGCYDGFGRVWESAGLCTHILEGHSDAISSVCIVNP----------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EATNV LATASKDRT+RLWKYSKDDRV NPTK+RPFKILKGH+LSVQSVASQKSGHL
Sbjct: 181 --GEATNVTLATASKDRTIRLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAW 300
           ICSGSWD+TIKLWRTDEH  EGDVSIKKRKKN QAEESQLEEDSVATL GHSQSVSSVAW
Sbjct: 241 ICSGSWDHTIKLWRTDEHQSEGDVSIKKRKKNTQAEESQLEEDSVATLDGHSQSVSSVAW 300

Query: 301 PKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIW 360
           PKHEEIYSVSWDHSVR WDVETGNVLFNH+ GKALNCLDIGGEGSSLIAAGGSDP +RIW
Sbjct: 301 PKHEEIYSVSWDHSVRRWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIW 360

Query: 361 DPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420
           DPRKPGTSSPIFQFSSHTSWVS CKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH
Sbjct: 361 DPRKPGTSSPIFQFSSHTSWVSDCKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSH 420

Query: 421 KEKVLSADWWKDDNVVSGGADSKLRISSGIYV 431
            +KVLSADWWKDD++VSGGADSKLRISSGIYV
Sbjct: 421 NDKVLSADWWKDDSIVSGGADSKLRISSGIYV 433

[Close]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL
Match: A0A6J1DM12 (Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC111022210 PE=3 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.5e-195
Identity = 352/453 (77.70%), Postives = 371/453 (81.90%), Query Frame = 0


Query: 1   MDIDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
           MDID   E+TSRR+QVRFITKL APF+VP NAIAIPSNLTRLGLSTVVNNL+ AGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  EEPFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDG 120
            EPFDFLIDGELVRMSLE+FLLAKGISA          AVAPR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SCPG------------VWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYH 180
           SCPG            VWESAGLCT ILEGHSDAISSVCIVNPE                
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPE---------------- 180

Query: 181 ADTEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHL 240
              EA +V LATASKDRTLRLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SG L
Sbjct: 181 ---EAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDL 240

Query: 241 ICSGSWDYTIKLWRTDEHHFEGD-VSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVA 300
           ICSGSWD TI LW+TDE   EGD VSIK+RKKNDQAEESQLE  SVATLVGH+Q VSSVA
Sbjct: 241 ICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVA 300

Query: 301 WPKHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRI 360
           WPKH EIYS SWDHSVR WDVETG  LFN   GKAL+CLDIGGEGS+LIAAGGSDP +RI
Sbjct: 301 WPKHGEIYSASWDHSVRRWDVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRI 360

Query: 361 WDPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDS 420
           WDPRKPGTS P+FQF SH+SWVSACKWHD+SWFHLLSASYDGK MLWDLRTAWPLAVIDS
Sbjct: 361 WDPRKPGTSGPVFQFLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDS 420

Query: 421 HKEKVLSADWWKDDNVVSGGADSKLRISSGIYV 431
           HK+KVLSADWWK DNV+SGG DS+L ISSGIYV
Sbjct: 421 HKDKVLSADWWKGDNVISGGVDSRLCISSGIYV 434

[Close]

BLAST of CcUC10G188340 vs. TAIR 10
Match: AT5G15550.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 583.6 bits (1503), Expect = 1.5e-166
Identity = 285/452 (63.05%), Postives = 350/452 (77.43%), Query Frame = 0


Query: 3   IDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEE 62
           +D D E+ SRR+ V+F+TKL++PF+VP N++AIPSN+TRLGLS++VN+++ + NPEW+ E
Sbjct: 1   MDIDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWKTE 60

Query: 63  PFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDGSC 122
           PFDFLIDGEL+RMSLE+FLLAKGISA          AV PR+EEEPS+HDDWVSAV+GS 
Sbjct: 61  PFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSS 120

Query: 123 P------------GVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHAD 182
           P             VW SAG C+ ILEGHS AISSV +VN                    
Sbjct: 121 PRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVN-------------------S 180

Query: 183 TEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLIC 242
            +A  V +ATASKDRTLRL+K+   + V + TK+R +KIL+GHK SVQSV++QKSG+++C
Sbjct: 181 NDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVC 240

Query: 243 SGSWDYTIKLWRTDEHHFEGD-VSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWP 302
           S SWD TI LW T+E   EG+ VS+KKRK N+QAEESQ E ++V +LVGH+Q VSSV WP
Sbjct: 241 SSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP 300

Query: 303 KHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWD 362
           +H+ IYS SWDHSVR WDVETG    N   GKALN +D+GGE S+LIAAGGSDPI+R+WD
Sbjct: 301 EHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWD 360

Query: 363 PRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHK 422
           PRKPGTS+P+FQFSSH+SW+SACKWH  SWFHLLSASYDGK+MLWDLRTAWPL+VID+H 
Sbjct: 361 PRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHN 420

Query: 423 EKVLSADWWKDDNVVSGGADSKLRISSGIYVS 432
           +KVLSADWWK ++VVSGGADS LRISSGI +S
Sbjct: 421 DKVLSADWWKGESVVSGGADSNLRISSGIAIS 433

[Close]

BLAST of CcUC10G188340 vs. TAIR 10
Match: AT5G15550.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 513.8 bits (1322), Expect = 1.4e-145
Identity = 253/410 (61.71%), Postives = 312/410 (76.10%), Query Frame = 0


Query: 3   IDADFEETSRRIQVRFITKLNAPFRVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWEEE 62
           +D D E+ SRR+ V+F+TKL++PF+VP N++AIPSN+TRLGLS++VN+++ + NPEW+ E
Sbjct: 1   MDIDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWKTE 60

Query: 63  PFDFLIDGELVRMSLEKFLLAKGISA----------AVAPRREEEPSVHDDWVSAVDGSC 122
           PFDFLIDGEL+RMSLE+FLLAKGISA          AV PR+EEEPS+HDDWVSAV+GS 
Sbjct: 61  PFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSS 120

Query: 123 P------------GVWESAGLCTRILEGHSDAISSVCIVNPEVLFPLSSLYGLLTFYHAD 182
           P             VW SAG C+ ILEGHS AISSV +VN                    
Sbjct: 121 PRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVN-------------------S 180

Query: 183 TEATNVILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLIC 242
            +A  V +ATASKDRTLRL+K+   + V + TK+R +KIL+GHK SVQSV++QKSG+++C
Sbjct: 181 NDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVC 240

Query: 243 SGSWDYTIKLWRTDEHHFEGD-VSIKKRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWP 302
           S SWD TI LW T+E   EG+ VS+KKRK N+QAEESQ E ++V +LVGH+Q VSSV WP
Sbjct: 241 SSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP 300

Query: 303 KHEEIYSVSWDHSVRSWDVETGNVLFNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWD 362
           +H+ IYS SWDHSVR WDVETG    N   GKALN +D+GGE S+LIAAGGSDPI+R+WD
Sbjct: 301 EHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWD 360

Query: 363 PRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKVMLWDLRTA 390
           PRKPGTS+P+FQFSSH+SW+SACKWH  SWFHLLSASYDGK+MLWDLRTA
Sbjct: 361 PRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391

[Close]

BLAST of CcUC10G188340 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 79.3 bits (194), Expect = 9.0e-15
Identity = 83/305 (27.21%), Postives = 131/305 (42.95%), Query Frame = 0


Query: 132 AISSVCIVNPEVLFPLSSLYGLLTFYHADTEATNVILATASK-DRTLRLWKYSK--DDRV 191
           A  S  +V P +L P+  L   L +  +  ++T +I A  S   R L      +    R 
Sbjct: 100 ATESAIVVGPTLLRPI--LPKGLNYTGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRW 159

Query: 192 SNPTKIRPFK---ILKGHKLSVQSVASQKSGHLICSGSWDYTIKLWRTDEHHFEGDVSIK 251
             P    P+K   +++GH   V+SVA   S    C+GS D TIK+W         DV+  
Sbjct: 160 PRPEWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW---------DVATG 219

Query: 252 KRKKNDQAEESQLEEDSVATLVGHSQSVSSVAWP-KHEEIYSVSWDHSVRSWDVETGNVL 311
             K                TL GH + V  +A   +H  ++S   D  V+ WD+E   V+
Sbjct: 220 VLK---------------LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 279

Query: 312 ---FNHLSGKALNCLDIGGEGSSLIAAGGSDPIVRIWDPRKPGTSSPIFQFSSHTSWVSA 371
                HLSG  + CL +      ++  GG D + R+WD R   T   IF  S H + V +
Sbjct: 280 RSYHGHLSG--VYCLAL-HPTLDVLLTGGRDSVCRVWDIR---TKMQIFALSGHDNTVCS 339

Query: 372 CKWHDKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKEKVLSADWWKDDNV-VSGGADS 426
             +   +   +++ S+D  +  WDLR    ++ +  HK+ V +      +N   S  AD+
Sbjct: 340 V-FTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN 371

[Close]

BLAST of CcUC10G188340 vs. TAIR 10
Match: AT3G18130.1 (receptor for activated C kinase 1C )

HSP 1 Score: 76.3 bits (186), Expect = 7.6e-14
Identity = 65/247 (26.32%), Postives = 112/247 (45.34%), Query Frame = 0


Query: 167 ILATASKDRTLRLWKYSKDDRVSNPTKIRPFKILKGHKLSVQSVASQKSGHLICSGSWDY 226
           I+ TAS+D+++ LWK +KDD+     + R    L GH   V+ V     G    SGSWD 
Sbjct: 30  IIVTASRDKSIILWKLTKDDKSYGVAQRR----LTGHSHFVEDVVLSSDGQFALSGSWDG 89

Query: 227 TIKLW--------RTDEHHFEGDVSIKKRKKNDQAEESQLEED------------SVATL 286
            ++LW        R    H +  +S+     N Q   +  +              +++  
Sbjct: 90  ELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG 149

Query: 287 VGHSQSVSSVAWPKH---EEIYSVSWDHSVRSWDVETGNVLFNHLSGKA--LNCLDIGGE 346
            GH + VS V +  +     I S SWD +V+ W+++    L N L G +  LN + +  +
Sbjct: 150 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK-LRNSLVGHSGYLNTVAVSPD 209

Query: 347 GSSLIAAGGSDPIVRIWDPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHLLSASYDGKV 389
           G SL A+GG D ++ +WD  +      ++   + +   S C   ++ W   L A+ +  +
Sbjct: 210 G-SLCASGGKDGVILLWDLAE---GKKLYSLEAGSIIHSLCFSPNRYW---LCAATENSI 264

[Close]

BLAST of CcUC10G188340 vs. TAIR 10
Match: AT3G16650.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 9.9e-14
Identity = 67/234 (28.63%), Postives = 103/234 (44.02%), Query Frame = 0


Query: 197 FKILKGHKLSVQSVASQKSGHLICSGSWDYTIKLWRTDEHHFEGDVSIKKRKKNDQAEES 256
           +++L+GH   V+SVA   S    C+GS D TIK+W         DV+    K        
Sbjct: 163 YRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW---------DVATGVLK-------- 222

Query: 257 QLEEDSVATLVGHSQSVSSVAWP-KHEEIYSVSWDHSVRSWDVETGNVL---FNHLSGKA 316
                   TL GH   V  +A   +H  ++S   D  V+ WD+E   V+     HL G  
Sbjct: 223 -------LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHG-- 282

Query: 317 LNCLDIGGEGSSLIAAGGSDPIVRIWDPRKPGTSSPIFQFSSHTSWVSACKWHDKSWFHL 376
           + CL +      ++  GG D + R+WD R   T   IF     +   S           +
Sbjct: 283 VYCLAL-HPTLDVVLTGGRDSVCRVWDIR---TKMQIFVLPHDSDVFSVLARPTDP--QV 342

Query: 377 LSASYDGKVMLWDLRTAWPLAVIDSHKEKVLS-ADWWKDDNVVSGGADSKLRIS 426
           ++ S+D  +  WDLR    +A I +HK+ V + A   K+++ VS  AD+  + S
Sbjct: 343 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFS 364

The following BLAST results are available for this feature:

BLAST of CcUC10G188340 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05339.1	3.0e-222	81.47	ribosome biogenesis protein WDR12-like protein [Cucumis melo var. makuwa]	[more]
KAA0041816.1	3.0e-222	81.29	ribosome biogenesis protein WDR12-like protein [Cucumis melo var. makuwa]	[more]
XP_008442030.1	1.6e-218	85.21	PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis melo] >XP_00844203...	[more]
XP_004149101.1	7.7e-218	84.96	ribosome biogenesis protein WDR12 homolog [Cucumis sativus] >KGN53899.1 hypothet...	[more]
XP_038875775.1	7.2e-216	84.55	ribosome biogenesis protein WDR12 homolog [Benincasa hispida] >XP_038875785.1 ri...	[more]

BLAST of CcUC10G188340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF27	2.1e-165	63.05	Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR...	[more]
Q8H594	2.7e-141	56.47	Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
A8IR43	1.4e-65	35.65	Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
Q5BJ90	4.9e-58	32.72	Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV...	[more]
Q0VC24	1.9e-57	32.03	Ribosome biogenesis protein WDR12 OS=Bos taurus OX=9913 GN=WDR12 PE=2 SV=1	[more]

BLAST of CcUC10G188340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4N3	1.5e-222	81.47	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7TIJ1	1.5e-222	81.29	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3B4A1	7.5e-219	85.21	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC10348601...	[more]
A0A0A0KYI3	3.7e-218	84.96	Ribosome biogenesis protein WDR12 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G18...	[more]
A0A6J1DM12	1.5e-195	77.70	Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CcUC10G188340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15550.1	1.5e-166	63.05	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G15550.2	1.4e-145	61.71	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G15900.1	9.0e-15	27.21	pleiotropic regulatory locus 1	[more]
AT3G18130.1	7.6e-14	26.32	receptor for activated C kinase 1C	[more]
AT3G16650.1	9.9e-14	28.63	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 168..182 score: 36.58 coord: 219..233 score: 38.5 coord: 372..386 score: 38.61
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 388..426 e-value: 0.11 score: 21.6 coord: 259..297 e-value: 9.3E-5 score: 31.8 coord: 193..232 e-value: 5.5E-6 score: 35.9 coord: 345..385 e-value: 2.5E-7 score: 40.4 coord: 119..181 e-value: 0.27 score: 20.3 coord: 300..339 e-value: 0.56 score: 18.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 348..385 e-value: 0.02 score: 15.7 coord: 196..231 e-value: 1.9E-6 score: 28.5 coord: 307..339 e-value: 0.014 score: 16.2 coord: 262..297 e-value: 0.0049 score: 17.7 coord: 122..181 e-value: 8.5E-4 score: 20.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 266..306 score: 11.510997
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 168..190 score: 8.804123
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 200..231 score: 11.711506
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 352..394 score: 10.775796
IPR012972	NLE	PFAM	PF08154	NLE	coord: 14..81 e-value: 4.6E-19 score: 68.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 155..432 e-value: 4.6E-58 score: 198.6
None	No IPR available	PANTHER	PTHR19855	WD40 REPEAT PROTEIN 12, 37	coord: 9..427
None	No IPR available	PANTHER	PTHR19855:SF11	RIBOSOME BIOGENESIS PROTEIN WDR12	coord: 9..427
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 266..302 score: 8.966513
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 352..388 score: 9.019239
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 200..231 score: 9.783781
None	No IPR available	CDD	cd00200	WD40	coord: 122..424 e-value: 5.60922E-42 score: 149.022
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 284..298
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 372..386
IPR028599	WD repeat WDR12/Ytm1	HAMAP	MF_03029	WDR12	coord: 8..429 score: 25.947208
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 166..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G188340.1	CcUC10G188340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043021	ribonucleoprotein complex binding