CcUC10G188140 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G188140
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	AAI domain-containing protein
Location	CicolChr10: 2323525 .. 2323833 (+)
RNA-Seq Expression	CcUC10G188140
Synteny	CcUC10G188140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTTGGGGTTTGGTTGTGGCAGTGGTGGCATTAATGGCGGTGGCAGTGGGGGAAGTGGCAGCGCTGACGGCGGCGGAATGTAAGGCTGAGAGAGATATGGCGGTGAAGGAGTGCATGGCGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACAGAGTGTATTTGCCCAGCAGTTACGCCAAAGCTAATGACGTATGTAGATCCTAATCGCGCCATTCGCCTCATTGAAGGCTGCGGGCGTAAGGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA

mRNA sequence

ATGGAGCGTTGGGGTTTGGTTGTGGCAGTGGTGGCATTAATGGCGGTGGCAGTGGGGGAAGTGGCAGCGCTGACGGCGGCGGAATGTAAGGCTGAGAGAGATATGGCGGTGAAGGAGTGCATGGCGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACAGAGTGTATTTGCCCAGCAGTTACGCCAAAGCTAATGACGTATGTAGATCCTAATCGCGCCATTCGCCTCATTGAAGGCTGCGGGCGTAAGGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA

Coding sequence (CDS)

ATGGAGCGTTGGGGTTTGGTTGTGGCAGTGGTGGCATTAATGGCGGTGGCAGTGGGGGAAGTGGCAGCGCTGACGGCGGCGGAATGTAAGGCTGAGAGAGATATGGCGGTGAAGGAGTGCATGGCGGTGGTGTTCGGGAGGAATCCGTCGCCGGCGTGCTGCGAGAGGGCGAGAGTGAGCCATACAGAGTGTATTTGCCCAGCAGTTACGCCAAAGCTAATGACGTATGTAGATCCTAATCGCGCCATTCGCCTCATTGAAGGCTGCGGGCGTAAGGTCCCTCGCCATTTCAAATGTGGAAGTAATTAA

Protein sequence

MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVSHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN

Homology

[Close]

BLAST of CcUC10G188140 vs. NCBI nr
Match: KAG6577655.1 (hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.1 bits (492), Expect = 5.8e-46
Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AVV  MAVAVGEVAALTAA+CKAERDMAVKEC+AVVFGRNPSPACC+RARVS
Sbjct: 18  MRRWGLVLAVV--MAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 77

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN 103
           HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN
Sbjct: 78  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGSN 117

[Close]

BLAST of CcUC10G188140 vs. NCBI nr
Match: XP_022923494.1 (uncharacterized protein LOC111431169 [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 2.9e-45
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AVV  MAVAVGEVAALTAA+CKAERDMAVKEC+AVVFGRNPSPACC+RARVS
Sbjct: 10  MRRWGLVLAVV--MAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 69

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 70  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. NCBI nr
Match: XP_022923495.1 (uncharacterized protein LOC111431170 [Cucurbita moschata])

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AV  +MAVAVGEVAALTAA+CKAERDMAVKEC+ VVFG NPSPACC+RARVS
Sbjct: 8   MRRWGLVLAVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 67

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 68  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. NCBI nr
Match: XP_023553118.1 (uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 5.4e-44
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MERWGLVVA-VVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARV 60
           M RWGLV+A VV +MAVAVGEVAALTAA+CKAER+MAVKEC+AVVFGRNPSPACC+RARV
Sbjct: 8   MRRWGLVLAVVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRNPSPACCQRARV 67

Query: 61  SHTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           SHTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 68  SHTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 109

[Close]

BLAST of CcUC10G188140 vs. NCBI nr
Match: XP_022965229.1 (uncharacterized protein LOC111465144 isoform X3 [Cucurbita maxima])

HSP 1 Score: 187.6 bits (475), Expect = 5.4e-44
Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AVV +MAVAVGEVAALTAA+CKAER+MAVKEC+AVVFGR+PSPACC+RARVS
Sbjct: 8   MRRWGLVLAVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRSPSPACCQRARVS 67

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVT KLMTYVDP+RAIRLIEGCGRKVPRHFKCGS
Sbjct: 68  HTECICPAVTAKLMTYVDPSRAIRLIEGCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. ExPASy TrEMBL
Match: A0A6J1E6K1 (uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC111431169 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AVV  MAVAVGEVAALTAA+CKAERDMAVKEC+AVVFGRNPSPACC+RARVS
Sbjct: 10  MRRWGLVLAVV--MAVAVGEVAALTAAQCKAERDMAVKECLAVVFGRNPSPACCQRARVS 69

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS
Sbjct: 70  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. ExPASy TrEMBL
Match: A0A6J1EBZ9 (uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC111431170 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 90/101 (89.11%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AV  +MAVAVGEVAALTAA+CKAERDMAVKEC+ VVFG NPSPACC+RARVS
Sbjct: 8   MRRWGLVLAVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 67

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 68  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. ExPASy TrEMBL
Match: A0A6J1HQF4 (uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44
Identity = 90/101 (89.11%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M RWGLV+AVV +MAVAVGEVAALTAA+CKAER+MAVKEC+AVVFGR+PSPACC+RARVS
Sbjct: 8   MRRWGLVLAVVVVMAVAVGEVAALTAAQCKAERNMAVKECLAVVFGRSPSPACCQRARVS 67

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVT KLMTYVDP+RAIRLIEGCGRKVPRHFKCGS
Sbjct: 68  HTECICPAVTAKLMTYVDPSRAIRLIEGCGRKVPRHFKCGS 108

[Close]

BLAST of CcUC10G188140 vs. ExPASy TrEMBL
Match: A0A6J1HN99 (uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M+RWGLV+ V  +MAVAVGEVAALTAA+CKAERDMAVKEC+ VVFG NPSPACC+RARVS
Sbjct: 12  MKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 71

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 72  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112

[Close]

BLAST of CcUC10G188140 vs. ExPASy TrEMBL
Match: A0A6J1HJS5 (uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465144 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 1   MERWGLVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVFGRNPSPACCERARVS 60
           M+RWGLV+ V  +MAVAVGEVAALTAA+CKAERDMAVKEC+ VVFG NPSPACC+RARVS
Sbjct: 12  MKRWGLVLTVAVVMAVAVGEVAALTAAQCKAERDMAVKECLPVVFGSNPSPACCQRARVS 71

Query: 61  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
           HTECICPAVTPKLMTYVDPNRAIRLIE CGRKVPRHFKCGS
Sbjct: 72  HTECICPAVTPKLMTYVDPNRAIRLIESCGRKVPRHFKCGS 112

[Close]

BLAST of CcUC10G188140 vs. TAIR 10
Match: AT4G33550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07
Identity = 29/101 (28.71%), Postives = 45/101 (44.55%), Query Frame = 0


Query: 6   LVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVF-----GRNPSPACCERARVS 65
           LV+  +AL  +    V    A  C A     + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 66  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
              C C  V+  +  Y+D ++ + +   CG+K+P  +KCGS
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109

[Close]

BLAST of CcUC10G188140 vs. TAIR 10
Match: AT4G33550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07
Identity = 29/101 (28.71%), Postives = 45/101 (44.55%), Query Frame = 0


Query: 6   LVVAVVALMAVAVGEVAALTAAECKAERDMAVKECMAVVF-----GRNPSPACCERARVS 65
           LV+  +AL  +    V    A  C A     + EC   V       + PS +CC   R  
Sbjct: 9   LVILAIALFMIGSDNVHVAKAQVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPI 68

Query: 66  HTECICPAVTPKLMTYVDPNRAIRLIEGCGRKVPRHFKCGS 102
              C C  V+  +  Y+D ++ + +   CG+K+P  +KCGS
Sbjct: 69  DVPCACRYVSRDVTNYIDMDKVVYVARSCGKKIPSGYKCGS 109

The following BLAST results are available for this feature:

BLAST of CcUC10G188140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577655.1	5.8e-46	93.14	hypothetical protein SDJN03_25229, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923494.1	2.9e-45	93.07	uncharacterized protein LOC111431169 [Cucurbita moschata]	[more]
XP_022923495.1	3.2e-44	89.11	uncharacterized protein LOC111431170 [Cucurbita moschata]	[more]
XP_023553118.1	5.4e-44	90.20	uncharacterized protein LOC111810619 [Cucurbita pepo subsp. pepo]	[more]
XP_022965229.1	5.4e-44	89.11	uncharacterized protein LOC111465144 isoform X3 [Cucurbita maxima]	[more]

BLAST of CcUC10G188140 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC10G188140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6K1	1.4e-45	93.07	uncharacterized protein LOC111431169 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1EBZ9	1.5e-44	89.11	uncharacterized protein LOC111431170 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HQF4	2.6e-44	89.11	uncharacterized protein LOC111465144 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HN99	3.4e-44	88.12	uncharacterized protein LOC111465144 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HJS5	3.4e-44	88.12	uncharacterized protein LOC111465144 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CcUC10G188140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33550.1	4.3e-07	28.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G33550.2	4.3e-07	28.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 11..99 e-value: 2.3E-10 score: 40.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 28..96 e-value: 1.0E-7 score: 34.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 38..95
None	No IPR available	PANTHER	PTHR33286	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 3..101
None	No IPR available	PANTHER	PTHR33286:SF38	SUBFAMILY NOT NAMED	coord: 3..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G188140.1	CcUC10G188140.1	mRNA