CcUC10G188000 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCTTCGGTGGTTTCCCATTTCCTTCTTTAAAACCTTCATCTTCTCCATTTTCTCTCCCAACTCAACAACTCCCTCTCTCCCATGGATTCCTCAAATCCCACCGCCGCCGCAAGGAAACCCTGCTTCCTCCACGACGACGACGACGCCATCGCCGACATGGAACCCGGAATCTCCTCTCACCCCTTCTTCTCCAGAAGCTTCCGTTCTCTCTCCTTCGCCTCCGCCGGTTCTAGATCTTCCCGTTTCGACGATCCTCTCCCTCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAACCTCTTGGAAATAACACCGATATCTTCATGTACAGGTTCGTTCATCTTCCGTTTCTAGGTTTTTTGATTTTGGGATTTATTAATTAAGATTTGGGACTGAAATCTTGTGTGTGGATTGTGATGGTTTTTTACAGAGGGGATACGCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAGCGAAAGAGAAGAAATGGAGGAGATCATCAGCAGCTGCCATGAAAGCACTGAGGAAAAAAGATCAACAAAGAAGAAGATCTACTTCTCCCAATAAGTCCTCTCCTCCGCCGGACTACCCTTTCTGCGCCGGCACCGTCGCCGCCGCTTAGATTTTACACAAATAAAAAAAGAAACTCATAAGAACAACAAAAACATGGAAGAAGAAGAAGAGATAAGAGATGGGTTTTTCTTTTTTCC AAAACCTTCGGTGGTTTCCCATTTCCTTCTTTAAAACCTTCATCTTCTCCATTTTCTCTCCCAACTCAACAACTCCCTCTCTCCCATGGATTCCTCAAATCCCACCGCCGCCGCAAGGAAACCCTGCTTCCTCCACGACGACGACGACGCCATCGCCGACATGGAACCCGGAATCTCCTCTCACCCCTTCTTCTCCAGAAGCTTCCGTTCTCTCTCCTTCGCCTCCGCCGGTTCTAGATCTTCCCGTTTCGACGATCCTCTCCCTCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAACCTCTTGGAAATAACACCGATATCTTCATGTACAGAGGGGATACGCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAGCGAAAGAGAAGAAATGGAGGAGATCATCAGCAGCTGCCATGAAAGCACTGAGGAAAAAAGATCAACAAAGAAGAAGATCTACTTCTCCCAATAAGTCCTCTCCTCCGCCGGACTACCCTTTCTGCGCCGGCACCGTCGCCGCCGCTTAGATTTTACACAAATAAAAAAAGAAACTCATAAGAACAACAAAAACATGGAAGAAGAAGAAGAGATAAGAGATGGGTTTTTCTTTTTTCC ATGGATTCCTCAAATCCCACCGCCGCCGCAAGGAAACCCTGCTTCCTCCACGACGACGACGACGCCATCGCCGACATGGAACCCGGAATCTCCTCTCACCCCTTCTTCTCCAGAAGCTTCCGTTCTCTCTCCTTCGCCTCCGCCGGTTCTAGATCTTCCCGTTTCGACGATCCTCTCCCTCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAACCTCTTGGAAATAACACCGATATCTTCATGTACAGAGGGGATACGCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAGCGAAAGAGAAGAAATGGAGGAGATCATCAGCAGCTGCCATGAAAGCACTGAGGAAAAAAGATCAACAAAGAAGAAGATCTACTTCTCCCAATAAGTCCTCTCCTCCGCCGGACTACCCTTTCTGCGCCGGCACCGTCGCCGCCGCTTAG MDSSNPTAAARKPCFLHDDDDAIADMEPGISSHPFFSRSFRSLSFASAGSRSSRFDDPLPHFLDSCFLCRKPLGNNTDIFMYRGDTPFCSEECRQEQIEIDEAKEKKWRRSSAAAMKALRKKDQQRRRSTSPNKSSPPPDYPFCAGTVAAA Homology
BLAST of CcUC10G188000 vs. NCBI nr
Match: XP_038903293.1 (FCS-Like Zinc finger 2-like [Benincasa hispida]) HSP 1 Score: 259.6 bits (662), Expect = 1.7e-65 Identity = 135/153 (88.24%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of CcUC10G188000 vs. NCBI nr
Match: KAG6577647.1 (FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015685.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254.6 bits (649), Expect = 5.3e-64 Identity = 132/158 (83.54%), Postives = 137/158 (86.71%), Query Frame = 0
BLAST of CcUC10G188000 vs. NCBI nr
Match: XP_022965206.1 (uncharacterized protein LOC111465132 [Cucurbita maxima]) HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63 Identity = 129/158 (81.65%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. NCBI nr
Match: XP_023552761.1 (uncharacterized protein LOC111810300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.8 bits (639), Expect = 7.7e-63 Identity = 131/159 (82.39%), Postives = 135/159 (84.91%), Query Frame = 0
BLAST of CcUC10G188000 vs. NCBI nr
Match: XP_022923587.1 (uncharacterized protein LOC111431226 [Cucurbita moschata]) HSP 1 Score: 248.8 bits (634), Expect = 2.9e-62 Identity = 127/158 (80.38%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 7.1e-27 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.5e-18 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.6e-10 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy TrEMBL
Match: A0A6J1HL26 (uncharacterized protein LOC111465132 OS=Cucurbita maxima OX=3661 GN=LOC111465132 PE=3 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 129/158 (81.65%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy TrEMBL
Match: A0A6J1E6I6 (uncharacterized protein LOC111431226 OS=Cucurbita moschata OX=3662 GN=LOC111431226 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62 Identity = 127/158 (80.38%), Postives = 135/158 (85.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy TrEMBL
Match: A0A5A7V4X5 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18110G00010 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.6e-61 Identity = 129/154 (83.77%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy TrEMBL
Match: A0A1S3BKF4 (uncharacterized protein LOC103490823 OS=Cucumis melo OX=3656 GN=LOC103490823 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.6e-61 Identity = 129/154 (83.77%), Postives = 130/154 (84.42%), Query Frame = 0
BLAST of CcUC10G188000 vs. ExPASy TrEMBL
Match: A0A0A0L1D2 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G016990 PE=3 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60 Identity = 127/154 (82.47%), Postives = 131/154 (85.06%), Query Frame = 0
BLAST of CcUC10G188000 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28 Identity = 76/160 (47.50%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of CcUC10G188000 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 114.4 bits (285), Expect = 8.0e-26 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 0
BLAST of CcUC10G188000 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 92.8 bits (229), Expect = 2.5e-19 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of CcUC10G188000 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-11 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CcUC10G188000 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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