CcUC10G187760 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC10G187760
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Late embryogenesis abundant protein
Location	CicolChr10: 1772848 .. 1774821 (-)
RNA-Seq Expression	CcUC10G187760
Synteny	CcUC10G187760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATATATATATATATATATATATGTTTGTGTCTTGTCGCTTTTGTTTCTGAATGATCTAAAAATTGGGAATAATGCAATCTGCAATGGAGAAGCTGAGTAATATGGGAAGTGTTGCTAAAGAGAAGCTTAAAATTTGTAGAGCCAAACTCCACGAGAAGGTGTGAATCTTTTATCTACATATATCTCCATTGTTATCATTAGTGTTAAATTTCAGTCGGTATATTAATATTTTCATCCATATTTTCCTATATTGTAGAAAAATTTATAAACATAACAAATAAACAACAAAATATCATTAATCTAAAACTACTATAAATGATAGAGTAATTTAAATATAATATAAATAAAGATATTTTAACTTATTTAAAAAATTTAATCTTAAATCTTTAAATTTTTATTTTTATAATTTTTTTCGAAAATATTTAGTGAAATCGACATTTTATCAATAATTCTATCAATATTTTCGTTCTCTATTCTACCTTTTAAACTTCGATTACCACCCAGCTGAATTTTAAGTTTTCGACTTCGGAAATGCAACCATTGAGCTACACTTAACTATATTCTTTCCTATTGAGTTTCAATTCTCTTGTAGGAATACTATTATTTTTCAATTAGTATATTGAGATCATTTTAATAGTTGATCAATTTTGGGTCTCTTATTGACATTTTTTTTAAAGGTTAAATATGTGTTTTAGTCTTAACTTTTTTTTTTTTTTTTTAACAAATTGTATAAATATCTCTTTATACCTTTGAATTAGGAGAATTAAAACTATAAACTAATAATTATATTAATTTAAGTTCAAGCCATCAATTTATACTTTACTCCGACGTGAATATGAAATTTATAATTTGGGTCAATTAAAATTTTAAATTTTCATAATTCAATCTATTATTAGACCCTTCAATGTTATTACTCTTGAAAATCATACATTAATTTTTAGAACGTACCACTAGAATTCAAAAGGGACCACTAGAGTAAATTATAGATGATTTTCCTTTTTCTGATTCATATTGATTAATTTATGAAAGCTTAAAAATCTAATGATAAAAGAGATCATATAGGTTCAAAATGAACCTAGCTCAATAATTAATTGAATGCTAATTAACATGAATTTTGGTGAAATTCTACATTTAAATCTTGTTGAACATACGAATGGCCATTTTTCTTCCCAGATACATATGTCTCTGAATATTTATAATGTATTTATAATGTATGAGTCTAATAAGTCATTTAATTAATATGTTTCTAAATTTGTTATTTTGTATTTAATTAGTTCATTAACCTTTACATTTATGTTCAATAGGTGGACATAGGTGTCTTTAATTGAGAGGTCTTTGAATTATTTCAATATTGACCTACTAAAATCTAAAATCTATGTTAAATATAGGTCTTTAGTTTCTAATTATTGTTCTTAAGGTTCTTGATCTAACATTTTTAAAATTATGATGGTCTGCCTTTTAAACACAGTATAAACATTTTCAATATAATTTACAACAATAGATAATTAATGTGTAAATGAAGGAACAGGTGGAGAAAGCGTCGGTGAAAACAGCGGAGGAGAGGAAGATTGTGGAGGAGAGAAGAAAGGCGGCAACGGCGGAGGCAAAGCGGGAGCTACACGAGGCCAAAGCCAGACATGCTGCTCAAAAGCTAAGGAATACGAAGTCAAAACAAGTACTTGGCGGCCATTTACACCATCATCACCCTCCGGTAGAGGGTGGCGCCGCCGCCATACATCTCGGCGGAGTAAATGTTCCGGCTTATCCTATAGTCAGCCCGGATGGGTACTTTCCCGGACATAAAATTTAACCTTTTTCAGATGTTTTTTCTCGATAACTTTTTTTTTTTTTTTTTAATGTAATTTTTGCATTATTAATTTTGCTAGTTGAGATAAATTAACCTAATTTGTTAGCAATTATGTCATATATTACAATCAAACAACTTTCCTATTGAAATAAATTTTAGTTACT

mRNA sequence

AATATATATATATATATATATATATGTTTGTGTCTTGTCGCTTTTGTTTCTGAATGATCTAAAAATTGGGAATAATGCAATCTGCAATGGAGAAGCTGAGTAATATGGGAAGTGTTGCTAAAGAGAAGCTTAAAATTTGTAGAGCCAAACTCCACGAGAAGGAACAGGTGGAGAAAGCGTCGGTGAAAACAGCGGAGGAGAGGAAGATTGTGGAGGAGAGAAGAAAGGCGGCAACGGCGGAGGCAAAGCGGGAGCTACACGAGGCCAAAGCCAGACATGCTGCTCAAAAGCTAAGGAATACGAAGTCAAAACAAGTACTTGGCGGCCATTTACACCATCATCACCCTCCGGTAGAGGGTGGCGCCGCCGCCATACATCTCGGCGGAGTAAATGTTCCGGCTTATCCTATAGTCAGCCCGGATGGGTACTTTCCCGGACATAAAATTTAACCTTTTTCAGATGTTTTTTCTCGATAACTTTTTTTTTTTTTTTTTAATGTAATTTTTGCATTATTAATTTTGCTAGTTGAGATAAATTAACCTAATTTGTTAGCAATTATGTCATATATTACAATCAAACAACTTTCCTATTGAAATAAATTTTAGTTACT

Coding sequence (CDS)

ATGCAATCTGCAATGGAGAAGCTGAGTAATATGGGAAGTGTTGCTAAAGAGAAGCTTAAAATTTGTAGAGCCAAACTCCACGAGAAGGAACAGGTGGAGAAAGCGTCGGTGAAAACAGCGGAGGAGAGGAAGATTGTGGAGGAGAGAAGAAAGGCGGCAACGGCGGAGGCAAAGCGGGAGCTACACGAGGCCAAAGCCAGACATGCTGCTCAAAAGCTAAGGAATACGAAGTCAAAACAAGTACTTGGCGGCCATTTACACCATCATCACCCTCCGGTAGAGGGTGGCGCCGCCGCCATACATCTCGGCGGAGTAAATGTTCCGGCTTATCCTATAGTCAGCCCGGATGGGTACTTTCCCGGACATAAAATTTAA

Protein sequence

MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFPGHKI

Homology

[Close]

BLAST of CcUC10G187760 vs. NCBI nr
Match: XP_008448704.1 (PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo] >KAA0053052.1 seed maturation protein [Cucumis melo var. makuwa] >TYK11507.1 seed maturation protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 3.6e-42
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAKEKLKICRAKL EK  VEKASVKTAEERKIVEERRKAATAEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKEKLKICRAKLDEK--VEKASVKTAEERKIVEERRKAATAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGG-VNVPAYPIVSPDGYF 120
           LHEAKARHAAQKLRN KS  + GGHL HHH PVEGGAA  HLGG  NVPAYPI SP+GY+
Sbjct: 61  LHEAKARHAAQKLRNRKSHVLGGGHL-HHHSPVEGGAAT-HLGGETNVPAYPIASPEGYY 120

Query: 121 PGHKI 125
           PGHKI
Sbjct: 121 PGHKI 121

[Close]

BLAST of CcUC10G187760 vs. NCBI nr
Match: XP_004148757.1 (late embryogenesis abundant protein 6 [Cucumis sativus] >KAE8650031.1 hypothetical protein Csa_009894 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40
Identity = 106/125 (84.80%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAKEKLKICRAKL EK  VEKASVKTAEERKI+EERRKAATAEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKEKLKICRAKLDEK--VEKASVKTAEERKIIEERRKAATAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGG-VNVPAYPIVSPDGYF 120
           LHEAKARHAAQKLRN KS  VLGGH  HH  P+EGGAA  HLGG  NVPAYPI SP+GY 
Sbjct: 61  LHEAKARHAAQKLRNRKS-HVLGGH-RHHQSPMEGGAAT-HLGGATNVPAYPITSPEGYH 120

Query: 121 PGHKI 125
           PGHKI
Sbjct: 121 PGHKI 120

[Close]

BLAST of CcUC10G187760 vs. NCBI nr
Match: XP_038906206.1 (late embryogenesis abundant protein 6-like [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 3.2e-38
Identity = 103/125 (82.40%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAKEKLKICRAKL EK  VEKASVKT EERKI EERRKAATAEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKEKLKICRAKLDEK--VEKASVKTREERKIAEERRKAATAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVP-AYPIVSPDGYF 120
           LHEAKARHAAQKLR+ KS  VLGGHL HHHPP+E GAAA +LG  NVP AYPI + +GY+
Sbjct: 61  LHEAKARHAAQKLRSKKS-HVLGGHL-HHHPPME-GAAATNLGAANVPAAYPIPTTEGYY 120

Query: 121 PGHKI 125
           PGHKI
Sbjct: 121 PGHKI 120

[Close]

BLAST of CcUC10G187760 vs. NCBI nr
Match: KAG6577696.1 (Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015739.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.1 bits (401), Expect = 2.5e-35
Identity = 96/124 (77.42%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAK+KLKICRAKL EK  V+KAS KTAEERKI EERRKAA AEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKKKLKICRAKLDEK--VQKASAKTAEERKIAEERRKAAEAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFP 120
           LHEAKARHAAQKLR T+   VL GH  HH PPVEGG+AA      NVPAYPI SP+GY+P
Sbjct: 61  LHEAKARHAAQKLR-TRQSHVL-GHRLHHQPPVEGGSAA------NVPAYPIASPEGYYP 114

Query: 121 GHKI 125
           GH+I
Sbjct: 121 GHRI 114

[Close]

BLAST of CcUC10G187760 vs. NCBI nr
Match: XP_022923386.1 (late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 159.1 bits (401), Expect = 2.5e-35
Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAK+KLKICRAKL EK  V+KAS KTAEERKI EERRKAA AEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKKKLKICRAKLDEK--VQKASAKTAEERKIAEERRKAAEAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFP 120
           LHEAKARHAAQKLR  +S  V  GH  HH PPVEGG+AA      NVPAYPI SP+GY+P
Sbjct: 61  LHEAKARHAAQKLRTRQSHVV--GHRLHHQPPVEGGSAA------NVPAYPIASPEGYYP 114

Query: 121 GHKI 125
           GH+I
Sbjct: 121 GHRI 114

[Close]

BLAST of CcUC10G187760 vs. ExPASy Swiss-Prot
Match: Q39138 (Late embryogenesis abundant protein 6 OS=Arabidopsis thaliana OX=3702 GN=LEA6 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09
Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSA +K+S+M S AKEK+ IC+AK  EK   E+A  +T EE++I  +RRKA  AEA  +
Sbjct: 1   MQSAKQKISDMASTAKEKMVICQAKADEK--AERAMARTKEEKEIAHQRRKAKEAEANMD 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHH--HHPPVEGGAAAI-HLGGVNVPAYPIVSPDG 120
           +H AKA HA  KL   +S   +  H  H     PV   A  + H  G N      V P  
Sbjct: 61  MHMAKAAHAEDKLMAKQSHYHVTDHGPHVPQQAPVPAPAPVMGHGYGHNPTGVTSVPPQT 120

[Close]

BLAST of CcUC10G187760 vs. ExPASy Swiss-Prot
Match: Q96273 (Late embryogenesis abundant protein 18 OS=Arabidopsis thaliana OX=3702 GN=LEA18 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 1  MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
          MQSA EK+S+M S AKEKL I  AK   +   EK   +T +E+K+ +ER K+  A+AK +
Sbjct: 1  MQSAKEKISDMASTAKEKLNIGGAK--AQGHAEKTMARTKKEKKLAQEREKSKEAQAKAD 60

Query: 61 LHEAKARHAAQKLRNTKSKQVLGGHLHHH 90
          LH++KA HAA         QV G HL  H
Sbjct: 61 LHQSKAEHAA-------DAQVHGHHLPGH 80

[Close]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL
Match: A0A5D3CHS9 (Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001710 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAKEKLKICRAKL EK  VEKASVKTAEERKIVEERRKAATAEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKEKLKICRAKLDEK--VEKASVKTAEERKIVEERRKAATAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGG-VNVPAYPIVSPDGYF 120
           LHEAKARHAAQKLRN KS  + GGHL HHH PVEGGAA  HLGG  NVPAYPI SP+GY+
Sbjct: 61  LHEAKARHAAQKLRNRKSHVLGGGHL-HHHSPVEGGAAT-HLGGETNVPAYPIASPEGYY 120

Query: 121 PGHKI 125
           PGHKI
Sbjct: 121 PGHKI 121

[Close]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL
Match: A0A1S3BKB4 (uncharacterized protein LOC103490795 OS=Cucumis melo OX=3656 GN=LOC103490795 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.7e-42
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAKEKLKICRAKL EK  VEKASVKTAEERKIVEERRKAATAEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKEKLKICRAKLDEK--VEKASVKTAEERKIVEERRKAATAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGG-VNVPAYPIVSPDGYF 120
           LHEAKARHAAQKLRN KS  + GGHL HHH PVEGGAA  HLGG  NVPAYPI SP+GY+
Sbjct: 61  LHEAKARHAAQKLRNRKSHVLGGGHL-HHHSPVEGGAAT-HLGGETNVPAYPIASPEGYY 120

Query: 121 PGHKI 125
           PGHKI
Sbjct: 121 PGHKI 121

[Close]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL
Match: A0A6J1E6N7 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35
Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAK+KLKICRAKL EK  V+KAS KTAEERKI EERRKAA AEAKRE
Sbjct: 1   MQSAMEKLSNMGSVAKKKLKICRAKLDEK--VQKASAKTAEERKIAEERRKAAEAEAKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFP 120
           LHEAKARHAAQKLR  +S  V  GH  HH PPVEGG+AA      NVPAYPI SP+GY+P
Sbjct: 61  LHEAKARHAAQKLRTRQSHVV--GHRLHHQPPVEGGSAA------NVPAYPIASPEGYYP 114

Query: 121 GHKI 125
           GH+I
Sbjct: 121 GHRI 114

[Close]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL
Match: A0A6J1HN56 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465145 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.0e-35
Identity = 95/124 (76.61%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSAMEKLSNMGSVAK+KLKICRAKL+EK  V+KAS KTAEERKIVEERRKAA AE KRE
Sbjct: 1   MQSAMEKLSNMGSVAKKKLKICRAKLNEK--VQKASAKTAEERKIVEERRKAAEAETKRE 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFP 120
           LHEAKARHAAQKLR T+   VL GH  HH PPVE G+AA      NVPAYPI SP+GY+P
Sbjct: 61  LHEAKARHAAQKLR-TRQSHVL-GHRLHHQPPVEEGSAA------NVPAYPIASPEGYYP 114

Query: 121 GHKI 125
           GH+I
Sbjct: 121 GHRI 114

[Close]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL
Match: A0A6J1E5Y8 (late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.7e-34
Identity = 91/120 (75.83%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 5   MEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRELHEA 64
           MEKLSNMGSVAK+KLKICRAKL EK  V+KAS KTAEERKI EERRKAA AEAKRELHEA
Sbjct: 1   MEKLSNMGSVAKKKLKICRAKLDEK--VQKASAKTAEERKIAEERRKAAEAEAKRELHEA 60

Query: 65  KARHAAQKLRNTKSKQVLGGHLHHHHPPVEGGAAAIHLGGVNVPAYPIVSPDGYFPGHKI 124
           KARHAAQKLR  +S  V  GH  HH PPVEGG+AA      NVPAYPI SP+GY+PGH+I
Sbjct: 61  KARHAAQKLRTRQSHVV--GHRLHHQPPVEGGSAA------NVPAYPIASPEGYYPGHRI 110

[Close]

BLAST of CcUC10G187760 vs. TAIR 10
Match: AT1G32560.1 (Late embryogenesis abundant protein, group 1 protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10
Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 1   MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
           MQSA +K+S+M S AKEK+ IC+AK  EK   E+A  +T EE++I  +RRKA  AEA  +
Sbjct: 1   MQSAKQKISDMASTAKEKMVICQAKADEK--AERAMARTKEEKEIAHQRRKAKEAEANMD 60

Query: 61  LHEAKARHAAQKLRNTKSKQVLGGHLHH--HHPPVEGGAAAI-HLGGVNVPAYPIVSPDG 120
           +H AKA HA  KL   +S   +  H  H     PV   A  + H  G N      V P  
Sbjct: 61  MHMAKAAHAEDKLMAKQSHYHVTDHGPHVPQQAPVPAPAPVMGHGYGHNPTGVTSVPPQT 120

[Close]

BLAST of CcUC10G187760 vs. TAIR 10
Match: AT2G35300.1 (Late embryogenesis abundant protein, group 1 protein )

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 1  MQSAMEKLSNMGSVAKEKLKICRAKLHEKEQVEKASVKTAEERKIVEERRKAATAEAKRE 60
          MQSA EK+S+M S AKEKL I  AK   +   EK   +T +E+K+ +ER K+  A+AK +
Sbjct: 1  MQSAKEKISDMASTAKEKLNIGGAK--AQGHAEKTMARTKKEKKLAQEREKSKEAQAKAD 60

Query: 61 LHEAKARHAAQKLRNTKSKQVLGGHLHHH 90
          LH++KA HAA         QV G HL  H
Sbjct: 61 LHQSKAEHAA-------DAQVHGHHLPGH 80

The following BLAST results are available for this feature:

BLAST of CcUC10G187760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448704.1	3.6e-42	86.40	PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo] >KAA0053052.1 see...	[more]
XP_004148757.1	5.8e-40	84.80	late embryogenesis abundant protein 6 [Cucumis sativus] >KAE8650031.1 hypothetic...	[more]
XP_038906206.1	3.2e-38	82.40	late embryogenesis abundant protein 6-like [Benincasa hispida]	[more]
KAG6577696.1	2.5e-35	77.42	Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022923386.1	2.5e-35	76.61	late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CcUC10G187760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39138	1.9e-09	42.28	Late embryogenesis abundant protein 6 OS=Arabidopsis thaliana OX=3702 GN=LEA6 PE...	[more]
Q96273	1.9e-06	46.07	Late embryogenesis abundant protein 18 OS=Arabidopsis thaliana OX=3702 GN=LEA18 ...	[more]

BLAST of CcUC10G187760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHS9	1.7e-42	86.40	Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BKB4	1.7e-42	86.40	uncharacterized protein LOC103490795 OS=Cucumis melo OX=3656 GN=LOC103490795 PE=...	[more]
A0A6J1E6N7	1.2e-35	76.61	late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HN56	6.0e-35	76.61	late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1E5Y8	8.7e-34	75.83	late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita moschata OX=3...	[more]

BLAST of CcUC10G187760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32560.1	1.3e-10	42.28	Late embryogenesis abundant protein, group 1 protein	[more]
AT2G35300.1	1.4e-07	46.07	Late embryogenesis abundant protein, group 1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..65
None	No IPR available	PANTHER	PTHR33493:SF6	LATE EMBRYOGENESIS ABUNDANT PROTEIN 6	coord: 1..112
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PFAM	PF03760	LEA_1	coord: 1..72 e-value: 6.6E-16 score: 58.7
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PANTHER	PTHR33493	LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC10G187760.1	CcUC10G187760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy