Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGCGGCCAACCCGAAAACAGGGGCCAAAACAGAGGCCAACCCAACTTTCAAAAACGAAGAAGACGACTCATTATAAATCGGCGTATATATATTACCATTCACCGCCGTCGCTTGCGGCGGCGGCGGCGGAAGAAACTGACAGCACTGGACAATGGTGGGAGGGCAGTTCGCAGGAGCAACTGGAACCGGCAGTGGCTCTGGCTCTTCAAACGGCGGCGGCGGTGGCGGCGAGAGTGGCAGTGGCTCGTACGGCGGTGGGCGGCAGGCAGATTGACAAATGGTGCA GTTGTCGCAGGAAATGGGTGTGGCCATGGCAGCGTCGTCGGTGGCGGAGACGGCGGAGTTGAGGTGGAAAACGACAACCAGAGCCAGAAATTTCGCCGGAAAATTGGCCGGAAACATATTGAATTGAATGGGGAGGTGAAAAAGGAGGGATTTTTGGGCTGG GTTTGAAGGGAAATGAAGGATTGAGAATTTATAAAGGCAGAAAAATGGGAAAGAAACGCCATGTGGTGGGGGAAAGACATTTGTCGAGTTTCTATGCAGAGTGGAAGAACAGAGTAAGCTTTTACCACCGCAATGTTTATCAACAAACATTTGGACTTAACTTAGAAACTGTT mRNA sequence
AAATGGCGGCCAACCCGAAAACAGGGGCCAAAACAGAGGCCAACCCAACTTTCAAAAACGAAGAAGACGACTCATTATAAATCGGCGTATATATATTACCATTCACCGCCGTCGCTTGCGGCGGCGGCGGCGGAAGAAACTGACAGCACTGGACAATGGTGGGAGGGCAGTTCGCAGGAGCAACTGGAACCGGCAGTGGCTCTGGCTCTTCAAACGGCGGCGGCGGTGGCGGCGAGAGTGGCAGTGGCTCGTACGGCGGTGGGCGGCAGGCAGATTGACAAATGGTGCAGAAATGGGTGTGGCCATGGCAGCGTCGTCGGTGGCGGAGACGGCGGAGTTGAGGTGGAAAACGACAACCAGAGCCAGAAATTTCGCCGGAAAATTGGCCGGAAACATATTGAATTGAATGGGGAGGTGAAAAAGGAGGGATTTTTGGGCTGGGGAAATGAAGGATTGAGAATTTATAAAGGCAGAAAAATGGGAAAGAAACGCCATGTGGTGGGGGAAAGACATTTGTCGAGTTTCTATGCAGAGTGGAAGAACAGAGTAAGCTTTTACCACCGCAATGTTTATCAACAAACATTTGGACTTAACTTAGAAACTGTT Coding sequence (CDS)
AAATGGCGGCCAACCCGAAAACAGGGGCCAAAACAGAGGCCAACCCAACTTTCAAAAACGAAGAAGACGACTCATTATAAATCGGCGTATATATATTACCATTCACCGCCGTCGCTTGCGGCGGCGGCGGCGGAAGAAACTGACAGCACTGGACAATGGTGGGAGGGCAGTTCGCAGGAGCAACTGGAACCGGCAGTGGCTCTGGCTCTTCAAACGGCGGCGGCGGTGGCGGCGAGAGTGGCAGTGGCTCGTACGGCGGTGGGCGGCAGGCAGATTGACAAATGGTGCAGAAATGGGTGTGGCCATGGCAGCGTCGTCGGTGGCGGAGACGGCGGAGTTGAGGTGGAAAACGACAACCAGAGCCAGAAATTTCGCCGGAAAATTGGCCGGAAACATATTGAATTGAATGGGGAGGTGAAAAAGGAGGGATTTTTGGGCTGGGGAAATGAAGGATTGAGAATTTATAAAGGCAGAAAAATGGGAAAGAAACGCCATGTGGTGGGGGAAAGACATTTGTCGAGTTTCTATGCAGAGTGGAAGAACAGAGTAAGCTTTTACCACCGCAATGTTTATCAACAAACATTTGGACTTAACTTAGAAACTGTT Protein sequence
KWRPTRKQGPKQRPTQLSKTKKTTHYKSAYIYYHSPPSLAAAAAEETDSTGQWWEGSSQEQLEPAVALALQTAAAVAARVAVARTAVGGRQIDKWCRNGCGHGSVVGGGDGGVEVENDNQSQKFRRKIGRKHIELNGEVKKEGFLGWGNEGLRIYKGRKMGKKRHVVGERHLSSFYAEWKNRVSFYHRNVYQQTFGLNLETV
Homology
BLAST of CcUC09G184290 vs. NCBI nr
Match:
KAE8645900.1 (hypothetical protein Csa_023731, partial [Cucumis sativus])
HSP 1 Score: 117.1 bits (292), Expect = 1.8e-22
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 0
Query: 98 NGCGHGSVVGGGDGGVEVENDNQSQKFRRKIGRKHIELN-GEVKKEGFLGWGNEGL---R 157 NGCGHGSVVGGGDGGVEV+ND+QSQKF GRKHIE G KK F G + + R Sbjct: 7 NGCGHGSVVGGGDGGVEVKNDDQSQKF----GRKHIEFEWGSEKKRIFFVMGLKEIGVFR 66 Query: 158 IYKGRKMGKKRHVVGERHLSSFYAEWKNRVSFYHRNVYQ 193 IY+GRK+ KK HVV E HLSSF EWK RVSFYHRNVY+ Sbjct: 67 IYRGRKIRKKCHVVRETHLSSFCEEWKKRVSFYHRNVYE 101
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAE8645900.1 1.8e-22 66.67 hypothetical protein Csa_023731, partial [Cucumis sativus] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
A A A T G G C G G C C A A C C C G A A A A C A G G G G C C A A A A C A G A G G C C A A C C C A A C T T T C A A A A A C G A A G A A G A C G A C T C A T T A T A A A T C G G C G T A T A T A T A T T A C C A T T C A C C G C C G T C G C T T G C G G C G G C G G C G G C G G A A G A A A C T G A C A G C A C T G G A C A A T G G T G G G A G G G C A G T T C G C A G G A G C A A C T G G A A C C G G C A G T G G C T C T G G C T C T T C A A A C G G C G G C G G C G G T G G C G G C G A G A G T G G C A G T G G C T C G T A C G G C G G T G G G C G G C A G G C A G A T T G A C A A A T G G T G C A G A A A T G G G T G T G G C C A T G G C A G C G T C G T C G G T G G C G G A G A C G G C G G A G T T G A G G T G G A A A A C G A C A A C C A G A G C C A G A A A T T T C G C C G G A A A A T T G G C C G G A A A C A T A T T G A A T T G A A T G G G G A G G T G A A A A A G G A G G G A T T T T T G G G C T G G G G A A A T G A A G G A T T G A G A A T T T A T A A A G G C A G A A A A A T G G G A A A G A A A C G C C A T G T G G T G G G G G A A A G A C A T T T G T C G A G T T T C T A T G C A G A G T G G A A G A A C A G A G T A A G C T T T T A C C A C C G C A A T G T T T A T C A A C A A A C A T T T G G A C T T A A C T T A G A A A C T G T T 50 100 150 200 250 300 350 400 450 500 550 600 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..22
Relationships
The following mRNA feature(s) are a part of this gene: