CcUC09G183820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G183820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	AAI domain-containing protein
Location	CicolChr09: 35152844 .. 35153182 (+)
RNA-Seq Expression	CcUC09G183820
Synteny	CcUC09G183820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTGGCAGGTACTAGTACCAACCCTTTGTGTAAGATCGACACGAAGGAGCTTGGTGTGTGTCAACCAGCAGTGGCTCCTTGGCATGGAAAACCATTGCAACCACCAACCAAAGGTTGTTGTTCGGTGCTTCGTCGTGCCGACCTCAAGTGTTTGTGCAACTTCAAATCAATTCTCCCATCCATTGGAATTAATATAACTAATGCTTTGGCTTTGCCTTCCAAATGTGGCATTAAAACTCCCCCAGAGTGCCATATAATTAGTAATAGCCTTACTCTTTTCCTTTCACCTTCCTTTTTCTCTATTTATGTCATCATCGTAATCAACACAAGCTAA

mRNA sequence

ATGCTTCTGGCAGGTACTAGTACCAACCCTTTGTGTAAGATCGACACGAAGGAGCTTGGTGTGTGTCAACCAGCAGTGGCTCCTTGGCATGGAAAACCATTGCAACCACCAACCAAAGGTTGTTGTTCGGTGCTTCGTCGTGCCGACCTCAAGTGTTTGTGCAACTTCAAATCAATTCTCCCATCCATTGGAATTAATATAACTAATGCTTTGGCTTTGCCTTCCAAATGTGGCATTAAAACTCCCCCAGAGTGCCATATAATTAGTAATAGCCTTACTCTTTTCCTTTCACCTTCCTTTTTCTCTATTTATGTCATCATCGTAATCAACACAAGCTAA

Coding sequence (CDS)

ATGCTTCTGGCAGGTACTAGTACCAACCCTTTGTGTAAGATCGACACGAAGGAGCTTGGTGTGTGTCAACCAGCAGTGGCTCCTTGGCATGGAAAACCATTGCAACCACCAACCAAAGGTTGTTGTTCGGTGCTTCGTCGTGCCGACCTCAAGTGTTTGTGCAACTTCAAATCAATTCTCCCATCCATTGGAATTAATATAACTAATGCTTTGGCTTTGCCTTCCAAATGTGGCATTAAAACTCCCCCAGAGTGCCATATAATTAGTAATAGCCTTACTCTTTTCCTTTCACCTTCCTTTTTCTCTATTTATGTCATCATCGTAATCAACACAAGCTAA

Protein sequence

MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGINITNALALPSKCGIKTPPECHIISNSLTLFLSPSFFSIYVIIVINTS

Homology

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BLAST of CcUC09G183820 vs. NCBI nr
Match: KAG6607773.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32
Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
          + L GT   PLC++DTKEL +CQPAVAP HG+PLQPPTKGCCSV+RRADLKCLC+ KS+L
Sbjct: 12 LFLVGTIATPLCRVDTKELKMCQPAVAPPHGQPLQPPTKGCCSVVRRADLKCLCSLKSVL 71

Query: 61 PSIGINITNALALPSKCGIKTPPEC 86
          P+IGIN  NALALPSKCGI TPPEC
Sbjct: 72 PTIGINTANALALPSKCGIHTPPEC 96

[Close]

BLAST of CcUC09G183820 vs. NCBI nr
Match: KAG7037350.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
           + L GT   PLC++DTKEL +CQPAVAP HG+ LQPPTKGCCSV+RRADLKCLC+ KS+L
Sbjct: 16  LFLVGTIATPLCRVDTKELKMCQPAVAPPHGQLLQPPTKGCCSVVRRADLKCLCSLKSVL 75

Query: 61  PSIGINITNALALPSKCGIKTPPECH 87
           P+IGIN  NALALPSKCGI TPPECH
Sbjct: 76  PTIGINTANALALPSKCGIHTPPECH 101

[Close]

BLAST of CcUC09G183820 vs. NCBI nr
Match: KAA0048160.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32
Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
          M+LAGTS   LCK+DTK+L VC+PAVAP HGKPLQPPTK CCSV+R ADLKCLCN KSIL
Sbjct: 1  MVLAGTSATLLCKVDTKKLCVCRPAVAPLHGKPLQPPTKRCCSVVRSADLKCLCNLKSIL 60

Query: 61 PSIGINITNALALPSKCGIKTPPEC 86
          PS GIN T ALALPSKCGI+TPPEC
Sbjct: 61 PSAGINATIALALPSKCGIRTPPEC 85

[Close]

BLAST of CcUC09G183820 vs. NCBI nr
Match: XP_038896217.1 (putative lipid-transfer protein DIR1 [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGV-CQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSI 60
           +LL G S   LCK+DTKEL V C+PAVAP HGKPLQPPTK CCSV+R ADLKCLCNFKSI
Sbjct: 21  ILLVGISATLLCKVDTKELCVNCRPAVAPLHGKPLQPPTKHCCSVIRHADLKCLCNFKSI 80

Query: 61  LPSIGINITNALALPSKCGIKTPPECH 87
           LPS+GIN T ALALPSKCGI TPPECH
Sbjct: 81  LPSVGINTTIALALPSKCGINTPPECH 107

[Close]

BLAST of CcUC09G183820 vs. NCBI nr
Match: KAE8646003.1 (hypothetical protein Csa_015464 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 2.9e-30
Identity = 66/85 (77.65%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
           M+LA T+   LCK+DTKEL VC+PAVAP HGKPLQPPT+ CCSVLR ADLKCLCN KSIL
Sbjct: 23  MVLAETTATLLCKVDTKELCVCRPAVAPLHGKPLQPPTERCCSVLRSADLKCLCNLKSIL 82

Query: 61  PSIGINITNALALPSKCGIKTPPEC 86
           PS GIN T ALALPSKCGI +PPEC
Sbjct: 83  PSAGINATIALALPSKCGIPSPPEC 107

[Close]

BLAST of CcUC09G183820 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.1e-08
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSI- 60
           ML+  +    LC +   EL  C+PAV+    +    P++ CC+ L+ AD  CLC +K+  
Sbjct: 19  MLVDTSVAIDLCGMSQDELNECKPAVSK---ENPTSPSQPCCTALQHADFACLCGYKNSP 78

Query: 61  -LPSIGINITNALALPSKCGIKTPPEC 86
            L S G++   A ALP +CG+   P C
Sbjct: 79  WLGSFGVDPELASALPKQCGLANAPTC 102

[Close]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL
Match: A0A5A7TY68 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00600 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.5e-32
Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
          M+LAGTS   LCK+DTK+L VC+PAVAP HGKPLQPPTK CCSV+R ADLKCLCN KSIL
Sbjct: 1  MVLAGTSATLLCKVDTKKLCVCRPAVAPLHGKPLQPPTKRCCSVVRSADLKCLCNLKSIL 60

Query: 61 PSIGINITNALALPSKCGIKTPPEC 86
          PS GIN T ALALPSKCGI+TPPEC
Sbjct: 61 PSAGINATIALALPSKCGIRTPPEC 85

[Close]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL
Match: A0A0A0LBB0 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 66/85 (77.65%), Postives = 72/85 (84.71%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
           M+LA T+   LCK+DTKEL VC+PAVAP HGKPLQPPT+ CCSVLR ADLKCLCN KSIL
Sbjct: 21  MVLAETTATLLCKVDTKELCVCRPAVAPLHGKPLQPPTERCCSVLRSADLKCLCNLKSIL 80

Query: 61  PSIGINITNALALPSKCGIKTPPEC 86
           PS GIN T ALALPSKCGI +PPEC
Sbjct: 81  PSAGINATIALALPSKCGIPSPPEC 105

[Close]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL
Match: A0A0A0LAS6 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-24
Identity = 54/87 (62.07%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVA-PWHGKPLQPPTKGCCSVLRRADLKCLCNFKSI 60
           +L A  +  PLCKIDT +L +C+ AV  P HG+PL  PT+ CCSV+R ADLKCLCN KS+
Sbjct: 16  LLPAAVTAYPLCKIDTSDLKLCRSAVTPPDHGQPLPLPTEDCCSVVRHADLKCLCNLKSV 75

Query: 61  LPSIGINITNALALPSKCGIKTPPECH 87
           LPS+GI+  NALALPSKC + +PPECH
Sbjct: 76  LPSMGIDTANALALPSKCNVASPPECH 102

[Close]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL
Match: A0A5A7TX28 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00630 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.6e-24
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1   MLLAGTST-NPLCKIDTKELGVCQPAVA-PWHGKPLQPPTKGCCSVLRRADLKCLCNFKS 60
           +LLAG  T +PLC+IDT +L VC+PAV  P HGK L  PT  CCSV+RRADLKCLC+ K 
Sbjct: 15  LLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLCSLKY 74

Query: 61  ILPSIGINITNALALPSKCGIKTPPEC 86
            LPS GIN  NALALPSKCG+  PPEC
Sbjct: 75  ALPSFGINTANALALPSKCGVSPPPEC 101

[Close]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL
Match: A0A1S3BHE7 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.6e-24
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1   MLLAGTST-NPLCKIDTKELGVCQPAVA-PWHGKPLQPPTKGCCSVLRRADLKCLCNFKS 60
           +LLAG  T +PLC+IDT +L VC+PAV  P HGK L  PT  CCSV+RRADLKCLC+ K 
Sbjct: 15  LLLAGAVTSSPLCEIDTTDLEVCRPAVTPPDHGKTLPLPTDACCSVVRRADLKCLCSLKY 74

Query: 61  ILPSIGINITNALALPSKCGIKTPPEC 86
            LPS GIN  NALALPSKCG+  PPEC
Sbjct: 75  ALPSFGINTANALALPSKCGVSPPPEC 101

[Close]

BLAST of CcUC09G183820 vs. TAIR 10
Match: AT5G55450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 10  PLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGINITN 69
           P+C IDT +L  C+PAV    G    PP   CC+V R A+L+CLC +K  LP++GI+ + 
Sbjct: 32  PVCNIDTNDLAKCRPAVT---GNNPPPPGPDCCAVARVANLQCLCPYKPYLPTVGIDPSR 91

Query: 70  ALALPSKCGIKTP 83
              L + CG+ +P
Sbjct: 92  VRPLLANCGVNSP 101

[Close]

BLAST of CcUC09G183820 vs. TAIR 10
Match: AT5G55460.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 12  CKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSILPSIGINITNAL 71
           C I+   L  C+PAV    G     P K CC +L+ A+LKC+C FKS+LP + +  +   
Sbjct: 33  CNINANHLEKCRPAVI---GDNPPSPIKECCELLQAANLKCICRFKSVLPVLAVYPSKVQ 92

Query: 72  ALPSKCGIKT-PPECHIISN 91
           AL SKCG+ T PP C  + N
Sbjct: 93  ALLSKCGLTTIPPACQALRN 109

[Close]

BLAST of CcUC09G183820 vs. TAIR 10
Match: AT5G55410.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
           M++   ++  +C +D  ++  C+PA+    G    PP   CC V+R+A+ +CLC FK  L
Sbjct: 23  MMVKEATSMSICDMDINDMQKCRPAIT---GNNPPPPVNDCCVVVRKANFECLCRFKFYL 82

Query: 61  PSIGINITNALALPSKCGIKTPP 84
           P + I+ +  +AL +KCG+ T P
Sbjct: 83  PILRIDPSKVVALVAKCGVTTVP 102

[Close]

BLAST of CcUC09G183820 vs. TAIR 10
Match: AT5G55410.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSIL 60
           M++   ++  +C +D  ++  C+PA+    G    PP   CC V+R+A+ +CLC FK  L
Sbjct: 23  MMVKEATSMSICDMDINDMQKCRPAIT---GNNPPPPVNDCCVVVRKANFECLCRFKFYL 82

Query: 61  PSIGINITNALALPSKCGIKTPP 84
           P + I+ +  +AL +KCG+ T P
Sbjct: 83  PILRIDPSKVVALVAKCGVTTVP 102

[Close]

BLAST of CcUC09G183820 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-09
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 1   MLLAGTSTNPLCKIDTKELGVCQPAVAPWHGKPLQPPTKGCCSVLRRADLKCLCNFKSI- 60
           ML+  +    LC +   EL  C+PAV+    +    P++ CC+ L+ AD  CLC +K+  
Sbjct: 19  MLVDTSVAIDLCGMSQDELNECKPAVSK---ENPTSPSQPCCTALQHADFACLCGYKNSP 78

Query: 61  -LPSIGINITNALALPSKCGIKTPPEC 86
            L S G++   A ALP +CG+   P C
Sbjct: 79  WLGSFGVDPELASALPKQCGLANAPTC 102

The following BLAST results are available for this feature:

BLAST of CcUC09G183820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607773.1	1.8e-32	76.47	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7037350.1	2.3e-32	75.58	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAA0048160.1	5.2e-32	80.00	putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa]	[more]
XP_038896217.1	5.2e-32	79.31	putative lipid-transfer protein DIR1 [Benincasa hispida]	[more]
KAE8646003.1	2.9e-30	77.65	hypothetical protein Csa_015464 [Cucumis sativus]	[more]

BLAST of CcUC09G183820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W453	7.1e-08	35.63	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=...	[more]

BLAST of CcUC09G183820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY68	2.5e-32	80.00	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LBB0	1.4e-30	77.65	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G759990 PE=4 SV...	[more]
A0A0A0LAS6	4.3e-24	62.07	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G760500 PE=4 SV...	[more]
A0A5A7TX28	9.6e-24	66.67	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BHE7	9.6e-24	66.67	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103490109 PE=...	[more]

BLAST of CcUC09G183820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55450.1	2.2e-12	42.47	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55460.1	2.2e-12	42.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.1	1.1e-11	34.94	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G55410.2	1.1e-11	34.94	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48485.1	5.1e-09	35.63	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 12..85 e-value: 3.8E-5 score: 33.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 33..85 e-value: 9.6E-10 score: 38.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 9..85 e-value: 7.1E-18 score: 66.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 12..86
None	No IPR available	PANTHER	PTHR33122:SF43	LIPID TRANSFER PROTEIN	coord: 4..86
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 4..86
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 12..83 e-value: 1.86827E-18 score: 71.2462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G183820.1	CcUC09G183820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding