CcUC09G178210 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G178210
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 25648702 .. 25652321 (+)
RNA-Seq ExpressionCcUC09G178210
SyntenyCcUC09G178210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGGATACTACGGCTGATAGGCCTTGTAAAGGTGTTGTATATTTGCACGGTGTGCCTGCGAGGTGATAACCAAGTCAAAATAGTGTTCCGTTTGGGTAGATCCAAAGATGAAATTTTAGAAAATATCATACCTTCATAGTTTCCAATCATGGTTTTTGTGACATTTGCATTTGGGCCAATTACTGCCAAAGACTTGATTGCAGAGGAAGACAAGGGCAGAGATTTTGGGCTGTTTTTAAGCAAAACTATGCCTTGTCTTGCAGCCTCCCGGGCCAACTCCTGATGCTCTGGTGTGCAAACATCCTTTGGACCGAGCTTTCCGTAAAGCTGCTTGCTGGGATTGCCATCAAAGAAACCTAACCTCATCAATGTTACAAGGTTGTTAGTAACTGCCTTATCAATGGCTGCCTCATTCACCAGCCCCGCCTTAACAGCTGCTTCAGTATGTTTCCCGAGAAAATCACCACAGTCGAGATCCAATCCTGGTAAATTAACAAATTTAAACCGACTGTTCAGTAAATATCCAATCTCATTGAATCTCTCTTACCAGCTCTATACATGTGAGCATTGGAATTCCTATAGATAATATTGGTATTCGAACCTTGACAAAGTTTTTACTGAAACTAATTGTAATGTGTGATTACCTGCCAATATAGTTTTAGCTGCAGATTCCTCCGGCAACTTGGTATAGTGTTGTGAATTGTAAAGTACATCTACTGAATCACAGTCGGAAACTATATATCTGCAGTTATCCAGTGTTATTGGAAATTAGCCACAATTAAAAATTTAGTCTTAACTTTAATGGCATACCAATATAGACAGAAGTAGGCATGAGACCAAATAATTTGACACATATGACCTACTTTCTTCTTTTAGCAAAATATCGACTTCGCTCTGTATAGCATTTTCATTCATCTAATTGTCTACTTTTTGCTCGTCACGTTATGTTAAATTAGCAAATATTTGTCCAATACGCATGTCATGCCACCATTGAGTCAACAACAGTTGGCAAAGCTGCATAGAATCTCAATTTATAATTCAATGATGTAATTGGTGTTTCTTAAGGTTCACAAGTTAAATGAAACTAAATTTGCAACCTAATCCATATGTAACGAGCTCATTTTTGTTCTGTTTCTCAGGGGGAACGAATAGAAAGAAACGAAACAGGAGAAGAAACGAACATACCCATTCAATTTCCACTGGCCTCGGATGACCCCAGCTAGGAGGTCTGGATCTGCACAAGTTGGTTTGCCATTAACTTGATTGTAAGAACACATAACACTAGCCACGTTGCCGTCAATCACACAGCTCTTGAATGGTGGCTGAAACGTATCCTCCAAATCTTGCGGTGTCACCTTCAATCAAAATACAAGACCACCTTCAGAAATGGAGCCAAAAATGACACTGCCAATGACAAATTCAAAGCAATGACAATGAAAGTGAACTATTACCACAGCATTGAAGTGATAACGATCTGTGCCTTTCCAATTATCCAAATCGTAAGCAGTGTAGTGTTTGCAGCAGGCGGCAACTTTAAGTCGGTCAGGATCACCGTCGTCCCGCTGCTGCAGGCCTCGGACGTAGCCAGCGGCGTACTTGCTGGAGAGCAGAGGGTCCTCCCCGGGAGTCTCTTGGCCTCTGCCCCATCTGGGGTCTCTGAAAATGTTGACATTCGGCGACCAATAGGTTAGCCCTGCTAATCCCACATTGTACATAGCTCTCGCTTCTGTTGAAACTACCTGCACAATCAACAAGTAAAAGTGCTTTCATATTTAATTTCAATCGAATCTAATCTTACTGCTCTTGCGTTCTTCATTCTTAGTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTATAATTAATTGATTCTTTTTAATTTTTCTGCTCTTTTTTTTCTTCTGATTTGGTGTTTTTGGCTTTTTGGCTTTTTCATTTAGATTATCCAGAAAAAAAAAAAAAAATGTGAGCTGTCGGCAGTTTCTATTGTCTGAGTCGAGATTTTCCTTTTGAGCTGGAACCATGAAAAAGTTTTGAAAAACTCTTGAATTTGTGTATAAATTTCATGTTCCTATTCCAGTAGGTCAACAACCACCATTTTCTTTTGCTAACAATTATTGGATAATTTAGCTTTTTAGGCAACCCTTTCAATCTCTCCTCTTCTTTCTTCTCTTTCTCTTTCTTCTTTAAGGCAACAGATTTCTGAAAAATCTTTCACCCACCTCCACATAACCTCCCTAGTAGCAGCTATTGAAGGTAATCTAATATCTACTTTTCTGACAGAAAATGAGGTGGAAATAATCTAAAAAAATATTTGATTCTTTTTTCTTCTGAAAAAGAGAGTTTTGCCTCAATTGATTGATCCCACTTCAGCGTACACCTTCAGAAAGATAAGTTTTTTTAATTCTTCTCTCACAGGAAAATGGGTTTTTTTTTTCTTTTTTTTTTTTCTGAAATGAAAATTTTAAAGGAAAAAGTAAATCATACAATTCACGAAACAAAGACTCATCCATTTTCTTCCTATGCAAATGTGATCTGCATTAACAAACAGAAAGAACATTTTGAAACCTCAAAAGCTCCGAGTTCTGCACTCGACTCAGTGGGTTAGTTCCGAGTTGTATATGCTATGCTAATAAACATATCTTGCAGATAAAAAACAAAGGGCCCCAATCACTCGAGTAATCTGAGGCGAGCATTTTTGTAAGCCACATTGTCAAGAAAGGGAGTTATAGAGAGAAAGAGAAGCATCGTATGTGATACCTTTCCAATGGCTTCAAACAGAGAAGCATTGAAGGAAGCCGCCGTCAAGATGACCTGAGGGAAGCTGGTGGCTCCGGGAACCACATTTGAAAATTTCGTCCCCGGACCGACGTAAGAGACTCCGTGCAAAGCCTCCGACCACCATTCATACTTCGGAATCCCAAGCCGGGTTACATTTCTAGCATTGTTGATCAGAAACCCAATCTTCTCCTGCAGTGTCAGCCGCTTCACCAAATCCTTCACTCTCGCTTCAAACCCGAGCGACGAATCGCAGAATCTGAACCCCGCCACGGCCGGATTGCTTCCGGCATCGCAGGCAAACGCCGTGGGCGACTGGCCGGAGCTACGGCAGAAACAGAGAGCCAGAAGGAAAAAGAAGAAGGGGAATGTAAAAACAGAGAGCTTTGGTTCTCTGTTTTTGAGAGGTGGGGAGGCCATGGCGAGCTGA

mRNA sequence

ATGAGAACACATAACACTAGCCACGTTGCCGTCAATCACACAGCTCTTGAATGGTGGCTGAAACGTATCCTCCAAATCTTGCGGTGTCACCTTCAATCAAAATACAAGACCACCTTCAGAAATGGAGCCAAAAATGACACTGCCAATGACAAATTCAAAGCAATGACAATGAAAGTGAACTATTACCACAGCATTGAAGTGATAACGATCTGTGCCTTTCCAATTATCCAAATCGTAAGCAGTGTAGTGTTTGCAGCAGGCGGCAACTTTAAGTCGGTCAGGATCACCGTCGTCCCGCTGCTGCAGGCCTCGGACGTAGCCAGCGGCGTACTTGCTGGAGAGCAGAGGGTCCTCCCCGGGAGTCTCTTGGCCTCTGCCCCATCTGGGGTCTCTGAAAATGTTGACATTCGGCGACCAATAGAGACTCCGTGCAAAGCCTCCGACCACCATTCATACTTCGGAATCCCAAGCCGGGTTACATTTCTAGCATTGTTGATCAGAAACCCAATCTTCTCCTGCAGTGTCAGCCGCTTCACCAAATCCTTCACTCTCGCTTCAAACCCGAGCGACGAATCGCAGAATCTGAACCCCGCCACGGCCGGATTGCTTCCGGCATCGCAGGCAAACGCCGTGGGCGACTGGCCGGAGCTACGGCAGAAACAGAGAGCCAGAAGGAAAAAGAAGAAGGGGAATGTAAAAACAGAGAGCTTTGGTTCTCTGTTTTTGAGAGGTGGGGAGGCCATGGCGAGCTGA

Coding sequence (CDS)

ATGAGAACACATAACACTAGCCACGTTGCCGTCAATCACACAGCTCTTGAATGGTGGCTGAAACGTATCCTCCAAATCTTGCGGTGTCACCTTCAATCAAAATACAAGACCACCTTCAGAAATGGAGCCAAAAATGACACTGCCAATGACAAATTCAAAGCAATGACAATGAAAGTGAACTATTACCACAGCATTGAAGTGATAACGATCTGTGCCTTTCCAATTATCCAAATCGTAAGCAGTGTAGTGTTTGCAGCAGGCGGCAACTTTAAGTCGGTCAGGATCACCGTCGTCCCGCTGCTGCAGGCCTCGGACGTAGCCAGCGGCGTACTTGCTGGAGAGCAGAGGGTCCTCCCCGGGAGTCTCTTGGCCTCTGCCCCATCTGGGGTCTCTGAAAATGTTGACATTCGGCGACCAATAGAGACTCCGTGCAAAGCCTCCGACCACCATTCATACTTCGGAATCCCAAGCCGGGTTACATTTCTAGCATTGTTGATCAGAAACCCAATCTTCTCCTGCAGTGTCAGCCGCTTCACCAAATCCTTCACTCTCGCTTCAAACCCGAGCGACGAATCGCAGAATCTGAACCCCGCCACGGCCGGATTGCTTCCGGCATCGCAGGCAAACGCCGTGGGCGACTGGCCGGAGCTACGGCAGAAACAGAGAGCCAGAAGGAAAAAGAAGAAGGGGAATGTAAAAACAGAGAGCTTTGGTTCTCTGTTTTTGAGAGGTGGGGAGGCCATGGCGAGCTGA

Protein sequence

MRTHNTSHVAVNHTALEWWLKRILQILRCHLQSKYKTTFRNGAKNDTANDKFKAMTMKVNYYHSIEVITICAFPIIQIVSSVVFAAGGNFKSVRITVVPLLQASDVASGVLAGEQRVLPGSLLASAPSGVSENVDIRRPIETPCKASDHHSYFGIPSRVTFLALLIRNPIFSCSVSRFTKSFTLASNPSDESQNLNPATAGLLPASQANAVGDWPELRQKQRARRKKKKGNVKTESFGSLFLRGGEAMAS
Homology
[Close]
BLAST of CcUC09G178210 vs. NCBI nr
Match: KAB8097170.1 (hypothetical protein EE612_025843, partial [Oryza sativa] >BAS91255.1 Os04g0640750, partial [Oryza sativa Japonica Group])

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-09
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 62  YHSIEVITICAFPIIQIVSSVVFAAGGNFKSVRITVVPLLQASDVASGVLAGEQRVLPGS 121
           YH +E + + A P++ +V  VV AAGG+ + V      +L+A DVA GVLAGEQRVL G 
Sbjct: 6   YHGVEGVALDALPVVDVVCGVVLAAGGDLERV-AAAAGVLEAGDVADGVLAGEQRVLAGR 65

Query: 122 LLASAPSGVSENVDIRRPIETP 144
           LLA++P  V+E+VD+  P   P
Sbjct: 66  LLAASPPRVAEDVDVGAPEREP 86

[Close]
BLAST of CcUC09G178210 vs. NCBI nr
Match: OAY62576.1 (hypothetical protein ACMD2_01200 [Ananas comosus])

HSP 1 Score: 55.5 bits (132), Expect = 7.9e-04
Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 0 

Query: 74  PIIQIVSSVVFAAGGNFKSVRITVV------PLLQASDVASGVLAGEQRVLPGSLLASAP 133
           P + +V SVV AAGG+ +   + +V       +LQA+D  S   A E   + G L+  AP
Sbjct: 67  PGVDVVGSVVLAAGGDLERAGVEIVGGLEARHVLQAADRVSLNAAAEVMGV-GKLV--AP 126

Query: 134 SGVSENVDIRRPIETPCKASDHHSYFGIPSRVTFLALLIRNPIFSCSVSRFTKSFTLASN 193
             +  N++     ETP  ASDH  Y+G+P R T +A     P FS S    T  F   + 
Sbjct: 127 GTILLNLEPPPTSETPWSASDHQLYWGMPRRCTPVAPFPVCPTFSASAMLSTSRFARTAY 186

Query: 194 PSDESQNLNPA 199
            +D SQN N A
Sbjct: 187 GNDLSQNPNCA 194

[Close]
BLAST of CcUC09G178210 vs. ExPASy TrEMBL
Match: A0A0P0WFP8 (Os04g0640750 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0640750 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 62  YHSIEVITICAFPIIQIVSSVVFAAGGNFKSVRITVVPLLQASDVASGVLAGEQRVLPGS 121
           YH +E + + A P++ +V  VV AAGG+ + V      +L+A DVA GVLAGEQRVL G 
Sbjct: 6   YHGVEGVALDALPVVDVVCGVVLAAGGDLERV-AAAAGVLEAGDVADGVLAGEQRVLAGR 65

Query: 122 LLASAPSGVSENVDIRRPIETP 144
           LLA++P  V+E+VD+  P   P
Sbjct: 66  LLAASPPRVAEDVDVGAPEREP 86

[Close]
BLAST of CcUC09G178210 vs. ExPASy TrEMBL
Match: A0A7C8ZAB2 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-07
Identity = 38/69 (55.07%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 141 ETPCKASDHHSYFGIPSRVTFLALLIRNPIFSCSVSRFTKSFTLASNPSDESQNLNPATA 200
           +TPC ASDHHSY GIPS  T  A L RNP FSCSV+R T+S T  S     SQN    T 
Sbjct: 37  DTPCNASDHHSYLGIPSLCTAAAPLTRNPTFSCSVNRPTRSATRFSTLLVVSQNPRLVTD 96

Query: 201 GLLPASQAN 210
              P  QAN
Sbjct: 97  KFPPEPQAN 105

[Close]
BLAST of CcUC09G178210 vs. ExPASy TrEMBL
Match: A0A199UCU0 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_01200 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-04
Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 0 

Query: 74  PIIQIVSSVVFAAGGNFKSVRITVV------PLLQASDVASGVLAGEQRVLPGSLLASAP 133
           P + +V SVV AAGG+ +   + +V       +LQA+D  S   A E   + G L+  AP
Sbjct: 67  PGVDVVGSVVLAAGGDLERAGVEIVGGLEARHVLQAADRVSLNAAAEVMGV-GKLV--AP 126

Query: 134 SGVSENVDIRRPIETPCKASDHHSYFGIPSRVTFLALLIRNPIFSCSVSRFTKSFTLASN 193
             +  N++     ETP  ASDH  Y+G+P R T +A     P FS S    T  F   + 
Sbjct: 127 GTILLNLEPPPTSETPWSASDHQLYWGMPRRCTPVAPFPVCPTFSASAMLSTSRFARTAY 186

Query: 194 PSDESQNLNPA 199
            +D SQN N A
Sbjct: 187 GNDLSQNPNCA 194

The following BLAST results are available for this feature:
BLAST of CcUC09G178210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB8097170.12.8e-0947.56hypothetical protein EE612_025843, partial [Oryza sativa] >BAS91255.1 Os04g06407... [more]
OAY62576.17.9e-0435.88hypothetical protein ACMD2_01200 [Ananas comosus][more]
BLAST of CcUC09G178210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC09G178210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0P0WFP81.4e-0947.56Os04g0640750 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04... [more]
A0A7C8ZAB22.2e-0755.07Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A199UCU03.8e-0435.88Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_01200 PE=4 SV=1[more]
BLAST of CcUC09G178210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G178210.1CcUC09G178210.1mRNA