CcUC09G175820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G175820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	60S ribosomal protein L37a
Location	CicolChr09: 14771913 .. 14774561 (+)
RNA-Seq Expression	CcUC09G175820
Synteny	CcUC09G175820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAACAAAATTGTATTCTAGGGTTTCTCTGTTCAAGTTCTTCCCAGTTTCATCAAATCTTCTTCCGGAGATCTTGTAGTCAGCCAAGCAGCCATGGTAATTCCTCTTCCTTCGATTCATTGGCTCGTAAAGTGTCGACTATCTCTATTCCTCCGTAAAGAATTCTCTCTGAAAATTATTCACTTTATTTGTTCGTATTTTCTGTTGGACATGCTTTATCTTGATTGTCTTCTTGAAGGATTTGAGGATTTTTTTTCTTTTTTATTTTTTTGGTGATTTCGTTTTCTAATAGATGAAGTTCAGCCCCGTGTTACGACTTATTTTCATGATTCGAGTTTGCTGTTAAATTTTCAATGCACACTGGAACACTGCGTTGTTAGTTTCTGACTGACCATTCTAGTTACATATCCTTGTAATTGAAGACAACTTGACAAATCGAGCTTGTGTTACCATCTTCCCCCCATTAAGAACTGGAATTGGTGACATAGCATTAGCAGTACAGCACAGCTTGTAGCTACTGAAAAGAAAATGCAATAGGTCTTGGAATTTTTAAATGTATCACGACTCCCGAGTCACAAGTATTTTGGTTTGAATTCATCTTTGTTGAACTCCAAATATGGTTAATATCTGTAGGATTTTAATTGTTGTGACTGTCTGATAGATTTCATGAATCATGCTCCATAAAAGGAATATGGGCTAAGTGCTTTCCGATGCAATTAGCTTGTATTCGAAGTTTGGGGGTAATTGATATTGTTGGACTATGGAAACTGCCAAGAATCAGCAGGAGCTGTAGTGCTTGCTTTGTTGCTTAGAAATTTTCTTTGTGCTTTGTTACACGGTTCATATACACCTTTCTTCATTTCTTGATACTTTGAGATCCAAATTAGTTTGTTTCTTACCCCCCACATGCCCACACTCCTGCTCCAATATCCTTGGATTTCTTACATTATGCATGGAGAATGAAATGCTGAAAATTCTTTTGGTGAGAATTGACTATTGCATTTGAATTCATTGGATGTGAAAAGTTTTAAGCCGATTTCTTTCTTCTTTTACACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTAAATATTTTGAAATACGGATTTATGATTTATAATTTTGTATCTTGTATGGTACATAACTGGTTTTGCAGAGAATGCTTGTTTTTCTATTATTGTTTTCCATTATCGTTATTCTGCTTCTAGTCCAGTATGAAGCCATTTAAATCTTATTCTTCCTTAGGTTCTATAGGCAATCCAAAGAATGTTCAATTAATTGCTTTGTTCTTACAAAGACTATCCTAATCTCCTGTCAGCTGTATTTTCATGCAGTAGTTTTACCTGACTTTTCATCTTAGGAAAGTCATAGATGACCTATAAAGACTTAGTAATAAGTTACAAAATTAATTTGGATCAAAGAGTGAGAAGTGTCTTCTGTAGAAATCAAACTAATAAAGAATTGTTCTGTCTGGGACTGAATATAGAAGTGATCCGTAAATCAGAGAGTTCAACATTGATTTAAGGATTAATCGATACCTCCCCTGCAATAATTCTCATCTGTTAATTCAAATATGAATATTAATACTAATAACAAGACGTATGACTTAGTTAGAAGTAAAAACAACTTAATTATTAATTGGTTCACAAAAATCTTTGTCGATAATTTTTTTTTTATTCATATGTAAACAAGGCACCGTTAATTGATGGTTTTGGTGGTAAAATTACCTTAAAATGTTTTGTGAAATGTGGCATGATAAACATCAATATCATCTATTTTCTTTTTCATCTCTCAACTTTGGCTGACAACAGGTACCCGATATGGTGCTAGTCTGAGAAAACAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGGAAGGCAAGTAGTTGTCCTCTCTTTTTGGCCCAAGTTTTTAATTTCCTAATTATTTGTTCATGTTCCAATTACATGCTTCCCCATTGCAGTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAAGTAATGCTACGTCTTTTTATTTTTATTTGGTTTTCTTCTTATTTATTTATTTTTTAATTTTTATTATTATTGTTCTTGTTAATAAATATAGGTTAAACTATAAATTTGGTCCTTAAGGTTGAGAGAATGTTAGAATTTAGTCCCTATGGTTTGATAAAACCTTCCTAAAAAGTTAATACATACTCTTTTTGAGGATTTTATCAAACTATAGGGACCATTTACGAGGTTTTATCAAACCATAAAGACTAAATTCTAACTTTTAAAACCATAGGGATTGGATTTTAACTTTTTCGAACCATAGGTACCAAATTTGCAATATTAACCATAAATATATTTGATTTTGATGTTATTTTTGGTACCTTTTGGCAGCACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGTTGAGAGAGCAGACTGAAAGTTAAGCCATCTTCATTTGCGCATTTTCACCCCTTTATTTCTTGAGGAAAAAGATTGCTCCTCCTCTAGAATTCTCTCCATATCAATGTTGTAGGAATTGGTTATTTGAAGTTAATTGAAACTGATCCTTTTCTTC

mRNA sequence

AAAAAAAAACAAAATTGTATTCTAGGGTTTCTCTGTTCAAGTTCTTCCCAGTTTCATCAAATCTTCTTCCGGAGATCTTGTAGTCAGCCAAGCAGCCATGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATATGGTGCTAGTCTGAGAAAACAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGGAAGGCAAGTAGTTGTCCTCTCTTTTTGGCCCAATATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGTTGAGAGAGCAGACTGAAAGTTAAGCCATCTTCATTTGCGCATTTTCACCCCTTTATTTCTTGAGGAAAAAGATTGCTCCTCCTCTAGAATTCTCTCCATATCAATGTTGTAGGAATTGGTTATTTGAAGTTAATTGAAACTGATCCTTTTCTTC

Coding sequence (CDS)

ATGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGGTACCCGATATGGTGCTAGTCTGAGAAAACAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGGAAGGCAAGTAGTTGTCCTCTCTTTTTGGCCCAATATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTATTAGGAGGTTGAGAGAGCAGACTGAAAGTTAA

Protein sequence

MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of CcUC09G175820 vs. NCBI nr
Match: KVH88611.1 (hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus])

HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42
Identity = 93/106 (87.74%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAQYA 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK     + C     +YA
Sbjct: 35  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKLRKRINFCKCVFFRYA 94

Query: 61  VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 95  VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 140

[Close]

BLAST of CcUC09G175820 vs. NCBI nr
Match: KAF7137563.1 (hypothetical protein RHSIM_Rhsim07G0119700 [Rhododendron simsii])

HSP 1 Score: 180.6 bits (457), Expect = 6.6e-42
Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 1    MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFL--AQYAVK 60
            +TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK       +   QYAVK
Sbjct: 1541 LTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKCGGANQIVNCLQYAVK 1600

Query: 61   RKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
            RKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 1601 RKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 1644

[Close]

BLAST of CcUC09G175820 vs. NCBI nr
Match: OVA06874.1 (Ribosomal protein L37ae [Macleaya cordata])

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-41
Identity = 92/101 (91.09%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS        YAVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKASH--FSHPYYAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 99

[Close]

BLAST of CcUC09G175820 vs. NCBI nr
Match: KAF1873427.1 (hypothetical protein Lal_00027465, partial [Lupinus albus])

HSP 1 Score: 177.9 bits (450), Expect = 4.3e-41
Identity = 89/100 (89.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRKA 61
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK         +YAVKRKA
Sbjct: 67  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKVGLSFFVNVEYAVKRKA 126

Query: 62  VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 127 VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 166

[Close]

BLAST of CcUC09G175820 vs. NCBI nr
Match: KAB2622800.1 (hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 177.6 bits (449), Expect = 5.6e-41
Identity = 92/102 (90.20%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRK
Sbjct: 33  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------YAVKRK 92

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 93  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 124

[Close]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.2e-43
Identity = 91/102 (89.22%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------YAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61  AVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.1e-43
Identity = 89/102 (87.25%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          +AVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------FAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.1e-43
Identity = 89/102 (87.25%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          +AVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------FAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.3e-42
Identity = 88/101 (87.13%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK          +AVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGK----------FAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           AVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-41
Identity = 87/102 (85.29%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK          Y+VKRK
Sbjct: 1   MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGK----------YSVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
            VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61  VVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL
Match: A0A103XDD5 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_026305 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 93/106 (87.74%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----ASSCPLFLAQYA 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK     + C     +YA
Sbjct: 35  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKLRKRINFCKCVFFRYA 94

Query: 61  VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 95  VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 140

[Close]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL
Match: A0A200Q8W6 (Ribosomal protein L37ae OS=Macleaya cordata OX=56857 GN=BVC80_497g29 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 92/101 (91.09%), Postives = 93/101 (92.08%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS        YAVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKASH--FSHPYYAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 99

[Close]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL
Match: A0A6A5MJL7 (Uncharacterized protein (Fragment) OS=Lupinus albus OX=3870 GN=Lal_00027465 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41
Identity = 89/100 (89.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRKA 61
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK         +YAVKRKA
Sbjct: 67  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKVGLSFFVNVEYAVKRKA 126

Query: 62  VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 127 VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 166

[Close]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL
Match: A0A1U7XSD1 (60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-41
Identity = 92/102 (90.20%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------YAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL
Match: A0A6J1ICH2 (60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-41
Identity = 92/102 (90.20%), Postives = 92/102 (90.20%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK          YAVKRK
Sbjct: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK----------YAVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CcUC09G175820 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 169.9 bits (429), Expect = 1.1e-42
Identity = 87/102 (85.29%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK          Y+VKRK
Sbjct: 1   MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGK----------YSVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 103
            VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 61  VVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of CcUC09G175820 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 167.5 bits (423), Expect = 5.4e-42
Identity = 85/101 (84.16%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCPLFLAQYAVKRK 60
           M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGK          Y VKRK
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGK----------YGVKRK 60

Query: 61  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 102
           AVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 61  AVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:

BLAST of CcUC09G175820 vs. NCBI nr


Match Name	E-value	Identity	Description
KVH88611.1	3.0e-42	87.74	hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus]	[more]
KAF7137563.1	6.6e-42	88.46	hypothetical protein RHSIM_Rhsim07G0119700 [Rhododendron simsii]	[more]
OVA06874.1	2.5e-41	91.09	Ribosomal protein L37ae [Macleaya cordata]	[more]
KAF1873427.1	4.3e-41	89.00	hypothetical protein Lal_00027465, partial [Lupinus albus]	[more]
KAB2622800.1	5.6e-41	90.20	hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis]	[more]

BLAST of CcUC09G175820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	6.2e-43	89.22	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	8.1e-43	87.25	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	8.1e-43	87.25	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9ZRS8	5.3e-42	87.13	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]
Q9SRK6	1.5e-41	85.29	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]

BLAST of CcUC09G175820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A103XDD5	1.4e-42	87.74	Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_026...	[more]
A0A200Q8W6	1.2e-41	91.09	Ribosomal protein L37ae OS=Macleaya cordata OX=56857 GN=BVC80_497g29 PE=3 SV=1	[more]
A0A6A5MJL7	2.1e-41	89.00	Uncharacterized protein (Fragment) OS=Lupinus albus OX=3870 GN=Lal_00027465 PE=3...	[more]
A0A1U7XSD1	2.7e-41	90.20	60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 ...	[more]
A0A6J1ICH2	2.7e-41	90.20	60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1	[more]

BLAST of CcUC09G175820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	1.1e-42	85.29	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	5.4e-42	84.16	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 4..98 e-value: 2.9E-34 score: 117.0
IPR002674	Ribosomal protein L37ae	TIGRFAM	TIGR00280	TIGR00280	coord: 1..101 e-value: 1.6E-29 score: 100.0
IPR002674	Ribosomal protein L37ae	HAMAP	MF_00327	Ribosomal_L37Ae	coord: 4..82 score: 18.818157
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 1..102 e-value: 7.8E-43 score: 146.5
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 1..102
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 1..102
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 10..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G175820.1	CcUC09G175820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome